Salvelinus namaycush (lake trout): 120028359
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Entry
120028359 CDS
T07522
Name
(RefSeq) latent-transforming growth factor beta-binding protein 4-like isoform X1
KO
K08023
latent transforming growth factor beta binding protein 2/3/4
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
snh04990
]
120028359
Domain-containing proteins not elsewhere classified [BR:
snh04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
120028359
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
TB
EGF
hEGF
FXa_inhibition
EGF_3
Plasmod_Pvs28
EGF_2
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
120028359
NCBI-ProteinID:
XP_038829505
UniProt:
A0A8U0TVI1
LinkDB
All DBs
Position
Sna34:8403327..8455983
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AA seq
1946 aa
AA seq
DB search
MLQLRPRLSLLPLLYLCFVFFPLPASNQTASHRGGTAAGAGRRGAERIKVLFTPTICKVR
CTQGRCTNFCEQGNVTTLYNSEQGGRAALGPGFRVFLCPMLCQNGGVCIQKDRCLCPPTF
TGKFCHIPVATPSTNDIEKPPRIPSVLASQQLLTQSEYILPLQSQQQSHSQPSGASGLSM
VKVRVQHPPEASVKIHQVLKVGYGPGTVREQSEMVTWSAGLSGARTSVLPGERAEAPPPK
PRVQAQTLHGDSTYTESSGFKYCFREVRNGQCSSPLPGLRSQDTCCRGIGLAWGINECVL
CPPNTGNGVDGSCPAGFERINGTQCVDVNECLQPGFCENGNCVNTRGSYSCVCRQGYILD
ASHGICISRKVISEDKGQCYRILNSGSGRGSCSVPILRNITKQICCCSRVGKAWGKNCER
CPYFGSVAFKEICPAGPGYHYSASAIKFNQRVVEQHGTGGPPVISQSTPQTRPQQPAQTS
PQQSLSSGSLPPQTRPQQPGSTTLLTTLTRPQQPSSSGPYNPQIGSQQPSSSGALTPQTR
PQQPDGRALTPQTRPQQPSSGGSLSPQGRPHIPAISVTAGPTRVVTARPPTKTQRPPVDR
RPVSPVRPAQPLPSPVTPRPPIPRPVRGVCETMPQVCGQGRCVDQPGGRHTCICNEGYQH
NAQQTHCQDIDECRTSPPPCGSGRCQNTEGGYRCSCPSGYQPGPRGTSCIDVNECIQAPS
PCSVGECENTPGRYRCVCPAGFRANFQQTQCQDIDECRQVPNPCNNGRCENSPGSFKCVC
RTGYKLEGNTCKDVDECEDPLKCPGQACVNSPGSYKCVSCPPGFGLLNEQCRDVDECRQT
PSLCTNGRCENTPGSYRCVCHTGYKLQGKTCADVDECEDPLRCPGQACVNSQGSYNCVSC
KPGFSMIDGQCSDIDECRQFPGPCTNGHCENTQGSYSCACLTGYRLHSDTCTDADECADP
SQCPGQECVNSQGSYKCVSCKPGFGLVNRRCTDVDECLHSPTRCANGRCENTAGSYKCAC
PSGFRLQGNTCGDVNECENALQCPGQECINSEGSFKCVACSPGFDAGNGQCTDIDECRQT
SNLCTNGLCENTLGSYRCACRPGFKLRDSICIDVDECEDPSQCPGQRCVNSEGSYKCIAC
KAGHSMQDGLCADVDECQSPDTCGAARLCVNTDGSYRCDCQPGYRTTGLGRQCRDVNECL
EGEYCFPKGECVNTEGSYRCVCSQGYTTSSDGSSCLDVDECARSGPGACQDGHCVNTEGS
YQCQCQVGFTTNPEKTACLDVDECSEGAVCRSQRCENTIGSYRCITSCEPGYRVTRTGEC
VDINECANETVCGEHAFCQNLIGTYQCMCDQGYTATSDGKGCVDENECETMQGVCGAARC
ENVDGSFMCECPGEGEEFDTRSGQCLSTPRPGLPVFPGGSSSSSSSSTTGLGPQRRPDAS
QLPPARPGELRECYYNTEEQSSCSVLARNTTQQECCCTVGQGWGMGCQYDPCPQLGTAEH
QALCPSGRGYVTGPGAFSYKDVDECKLFHPEVCKSGVCVNNIPGYSCYCTSGYYYDNVFL
ECIDVDECEAGEDSCPGGICVNTLGSHFCTCVPPLVLDDTQRSCVNSTGLAVDENLSFCW
QYVTPDLVCQSPLLGGQVTFTECCCLYGEGWGLQCALCPARDSEDYEARCNVFLRPPEFP
PPFPDRYGPDPGPGRGGGGGYRVPYRPDSFPDPIPRRPEYPRPDYDDYTPPGGSRPGFRG
RTPSTFRVPESPYRRPSGYIPERYYDEDDYGPPDAPPRSPFRTLPDPRSELAFGARPPLP
IPEGLPLSLAPLPDSDPYSEEEEVPEPWHVEPPFPDRRGPGGGGGGPRRVYERRYEPYAG
LGTEDCGILHGCENGRCIRVAEGYTCDCYEGYELDMTSMACIDINECEDPDNVCASGRCI
NTDGSYRCVCHRGYVMSRRPNHCVAA
NT seq
5841 nt
NT seq
+upstream
nt +downstream
nt
atgctccagctcagacccagactcagtctcctaccgctgctctacctctgcttcgtcttc
ttcccccttccagccagcaaccagaccgccagccaccgaggaggaacggcagcaggggca
ggaaggagaggagctgagcgcatcaaggtgctcttcaccccgaccatctgcaaggtgcgc
tgcacccagggacgctgcaccaacttctgcgagcagggcaatgtgaccaccctctacaac
agtgaacaggggggccgggctgcgctgggaccgggcttcagagtcttcctgtgccccatg
ttgtgtcaaaatggaggggtctgcatccagaaggaccgctgcctctgcccgccaaccttc
accggcaagttctgccacatccccgtggccacgccctccaccaatgacattgagaagcct
ccgcgcatcccctcggtgctggccagtcagcagctgctgacccagtcggagtacattctc
cccctgcagagccagcagcagagccacagtcagcccagcggtgcgtctggcttatccatg
gtcaaggtgcgggtgcagcaccccccagaggcaagcgtgaagatccaccaggtgctgaag
gtggggtatgggccaggcacagttagggagcagtcggagatggtcacctggtcagcaggc
ctctcgggggccaggaccagtgttctgccaggggagagggccgaagccccaccacccaaa
cccagagtccaggcccagaccctccacggtgactccacctacacagaatcctccgggttc
aagtactgcttcagggaggtccgcaacggccagtgcagctcacctctcccaggactcagg
agtcaggacacctgctgccgagggattggactggcctggggcatcaacgagtgtgtccta
tgtccccctaacacaggaaacggagtcgatgggagctgtccggctggatttgagaggatc
aacggcacccagtgtgttgatgttaatgagtgtttgcagccaggcttctgtgagaacggc
aactgtgtgaacactcgggggagctatagttgtgtctgcaggcaaggatacatactggac
gcctctcacgggatctgtatctcccgtaaggtgatctcggaggataagggccagtgctat
cgtatcctaaactctggctctggccgtggtagctgctccgtgcccatcctcaggaacatc
accaagcagatctgctgctgcagccgtgtgggcaaggcctggggcaagaactgtgagagg
tgtccctactttggatcagttgctttcaaggagatctgcccagcagggcctggctaccac
tactctgcctctgccatcaagttcaaccagagggtggtggagcagcacgggactggaggt
cctcctgtcatatcccagagcactccacagaccaggccacaacaaccagcccaaactagt
ccccaacaatctttaagctcaggctctctccctccccaaaccaggcctcaacaaccaggt
agcactactctgctcaccactctgacgagacctcagcaaccatcaagctcaggcccttac
aatccgcaaattggatcccaacagccttcaagcagtggtgcactgactccccaaactaga
ccccaacagccagatggtagagctctcacacctcagaccagaccccagcagccatcgagt
ggaggctccctgtccccccagggcagaccacacatcccagccatctctgttacagcagga
cccacccgggtggtgacagctcgaccccccacgaagacccaacggcctccagttgaccga
cggccagtatctccagtgagacccgcccagcccctcccatctccggtcacgccccgccca
cccatccccaggccagtgcggggtgtgtgtgagaccatgccccaggtgtgtggacagggc
cgctgtgtggaccagcccggagggagacatacctgcatctgtaacgagggataccaacac
aatgctcagcagactcattgtcaagacatagacgagtgcaggacgtctcccccgccctgc
ggcagcggccgctgccagaacacagaagggggctacaggtgcagctgcccctctggatac
cagccgggaccacggggcaccagctgtatagatgtcaatgagtgcatccaggctcccagt
ccctgttctgttggggagtgtgagaatacaccaggccgctacagatgtgtgtgtcctgct
ggcttcagagccaacttccaacagacgcagtgtcaagatattgacgagtgtcgtcaggtt
ccgaacccctgtaacaacggccgctgtgagaatagccctggtagcttcaagtgtgtctgc
cgcactgggtacaagctagagggcaacacgtgtaaagatgtggatgagtgtgaggacccc
ttgaagtgtcctggtcaggcctgtgtcaactctccaggatcatacaagtgtgtgtcttgc
ccaccagggtttgggctgctcaacgaacaatgccgagatgttgacgagtgccgtcagacc
cccagcctttgcaccaatggtcgttgtgagaacactcccgggagctacaggtgtgtttgc
cacacgggatacaaactacaaggcaagacctgcgcagatgtggatgagtgtgaggaccct
ttgaggtgtcctggtcaggcctgtgtcaactctcagggttcttacaactgtgtgtcttgc
aagccaggcttcagcatgatcgatggacaatgctcagatatagatgagtgtcgtcaattc
cccggcccatgcaccaacggtcactgcgagaacacccagggtagctacagctgtgcgtgt
ctcactggctacagactacacagtgatacctgtacagacgcggatgaatgcgcagacccg
tcccagtgccctggccaggagtgtgtcaactcccagggctcatacaagtgtgtgtcctgc
aagccaggctttgggctggtcaacagacgctgcacagatgttgacgagtgcctccacagc
cccactcgctgtgctaacggtcgttgtgagaatacggctggaagctacaagtgtgcgtgt
ccatctggcttcaggctacagggcaacacctgcggagatgtcaatgagtgtgagaacgct
ctgcagtgtcctggtcaggagtgtatcaactctgagggctccttcaaatgtgtggcctgt
agcccaggctttgatgctggaaatggacagtgtacagatattgatgagtgtcgccagacc
tccaacctatgtaccaacggcctctgtgaaaacactctcggtagctaccggtgcgcttgt
cgccccgggttcaaactacgggacagcatctgtattgacgttgatgaatgcgaagacccc
tcacagtgtcctgggcaacggtgtgtgaattctgaaggctcctacaagtgtatcgcctgc
aaagctggccacagtatgcaagatgggttatgcgcagatgtggatgaatgccagagccct
gacacctgtggtgcagcgaggctatgtgtgaacacggacggctcctaccgctgtgactgt
caaccaggctacagaaccactggccttggacgccaatgtagagacgtcaacgagtgtcta
gagggggagtactgcttccccaagggagagtgtgtgaacacagagggctcctaccgctgt
gtgtgttcccagggttacaccaccagcagcgacggcagctcctgcctagatgtggatgag
tgtgccaggtcaggcccgggggcgtgccaggatgggcactgtgtcaacacagagggctcc
taccagtgccagtgccaagtgggattcaccaccaacccagagaagacagcctgtctggat
gtagatgagtgctcagagggagcagtgtgtcggtcacaacgttgtgagaacaccattggc
tcctaccgctgtatcacctcctgtgagccgggctaccgggtcactcgcaccggagagtgc
gtcgatatcaatgagtgtgccaatgagaccgtatgcggggagcatgcgttctgccagaac
ctaattggaacataccagtgcatgtgtgaccagggctacacagccaccagcgatgggaag
ggatgtgtggatgaaaacgagtgtgagactatgcagggtgtgtgtggcgcggcacgctgt
gagaatgtggatggctccttcatgtgtgagtgtccaggagagggggaggagtttgatacg
cgctcaggacagtgcctcagcacaccccgaccaggtcttccagtgttccctggcggctcc
tcctcgtcttcgtcttcctccaccaccggcctcggtccccagcgtcggcccgatgcgtcc
cagctgccccctgctcggcctggcgagttgagggagtgttactacaacaccgaggagcag
agctcgtgcagcgtcctggcccgcaacaccactcagcaggagtgctgctgcaccgtgggc
cagggctggggcatgggctgccagtatgacccctgtcctcagctaggcacagccgagcac
caggcgttgtgccccagcggacgaggatatgtgactgggccaggagcgtttagctacaaa
gatgtggatgagtgtaaactgttccaccctgaggtgtgtaagagcggtgtatgtgtcaac
aacatccctggctactcctgctactgcaccagtggctactactacgacaacgtgtttctg
gagtgcatcgatgttgatgagtgtgaggcaggggaggacagctgtccagggggaatctgc
gtcaacacattaggctcacacttctgtacctgcgtgcctcctcttgtgttggacgacact
cagcgcagctgtgtcaattccactggcctcgccgtggatgagaacctgtccttctgctgg
cagtatgtcacaccagacctggtgtgtcagagccccctgctgggcggacaggtcaccttc
actgagtgctgctgtctgtatggagagggctggggactgcagtgtgctctgtgtcctgcc
agagactcagaggactatgaggctcggtgtaacgtcttcctgaggcccccagagtttcct
ccccccttccctgaccgctacggtccggacccagggccaggtagaggaggaggggggggg
tatcgcgtgccatatagaccggactccttcccagaccccatcccccgcaggcctgagtac
ccccggcctgactatgatgactacacaccaccagggggcagcaggcctggcttcagaggc
agaacgcccagcaccttcagggtcccagagagcccatacagacggccctcaggatacatt
cctgagcggtactatgacgaggacgactacggcccgcctgacgcgcctccgagatctccc
ttccgcaccctcccagaccctcgttctgagcttgcctttggggcgaggccccctcttccc
atccctgagggcctccctctgagtctggcccccctcccggacagtgacccctacagtgag
gaggaggaggtgccagaaccctggcatgtggaacccccgttccctgacagacgggggcca
ggtggtggaggcggaggcccaaggagagtctatgagagacgatatgagccgtatgcaggc
ctgggcacagaggactgtgggatactgcacggctgtgagaacggcaggtgtatccgtgtg
gcggagggatacacgtgtgactgctacgagggatacgagctggacatgacctccatggcc
tgcatagacatcaatgaatgtgaggatcctgacaacgtgtgtgcgagcggccgatgcatc
aacacagacggctcctatcgctgtgtgtgtcaccgaggctacgtcatgtcccgtcggccc
aaccactgtgtggcagcatag
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