Salvelinus namaycush (lake trout): 120028439
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Entry
120028439 CDS
T07522
Name
(RefSeq) cell adhesion molecule 1-like
KO
K06781
cell adhesion molecule 1
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
120028439
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
snh04515
]
120028439
Cell adhesion molecules [BR:
snh04515
]
Immunoglobulin superfamily
Nectin family
120028439
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Motif
Pfam:
Ig_3
I-set
ig
Ig_2
C2-set_2
V-set
C1-set
KOW2_Spt5
Adhes-Ig_like
Syndecan
Motif
Other DBs
NCBI-GeneID:
120028439
NCBI-ProteinID:
XP_038829586
UniProt:
A0A8U0PPD4
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Position
Sna34:23288366..23333967
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AA seq
407 aa
AA seq
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MGRIQMDEDGGCDEPMLQVHEGSVDRWRPCERYFGRVEGQNLGTDNVSVIEGEMATISCR
VKNNDDSVIQLLNPNRQTIYFRDVRPLKDSRFQLVNFSDNELRVSLSNVSLSDEGRYVCQ
LYTDPPQEAYADITVLVPPGSPIMDSREDVVSEGNETELTCTAMVSKPAASIRWMKGEQE
LTGEMTVDETYDRMFTVTSRLRLTVSKEDDGEPVSCIIDHPAVKDLRAQRYLEVLYQPEV
KIVQAFPEGLTREGENLELTCIAKGKPQPHQISWLRVDDDVPSHTVITGSDLFIENLNKS
YNGTYRCVASNTVGDAYDDYILFVYDSRAGEGAPQKIDHAVIGGVVAVVMFAILCALIVL
GRYFARHKGTYFTHEAKGADDAADADTAIINAEGGHNNTEEKKEYYI
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgggacggatccagatggacgaggatgggggctgtgatgaaccgatgcttcaggtccac
gaaggctctgtcgaccgctggagaccatgtgaacgttactttgggagagttgaaggtcaa
aacctggggactgataatgtgtcagtgatcgagggggagatggcgaccatcagctgcagg
gtgaagaacaatgatgactcagtcatccagctcctcaaccccaacagacagaccatctac
ttcagagacgtcagacccctgaaggacagccggttccagctggtgaatttctccgacaac
gaactgcgggtgtctctgtccaacgtgtctctctcagatgagggacgctatgtgtgccag
ctctacacagaccctcctcaggaggcctacgcagacatcactgtgctggtcccaccagga
agtccaatcatggattcccgagaggatgtggtcagtgaggggaacgagacagagctcacc
tgtacagccatggtcagcaagcctgccgcctccatcagatggatgaaaggagagcaggag
ctgacaggcgagatgacggtggatgagacctatgacaggatgttcacggtcaccagtcgg
ctgagactcactgtgtccaaggaggatgacggagagccagtcagctgcatcatcgaccac
ccagccgtgaaggacctccgggcacagagatacctggaagtgctatatcaaccagaagtg
aagatcgttcaggcattccctgaaggtttaacgagagagggagagaatctagagctgacg
tgcatagcaaaaggcaaaccacagccccatcagatcagctggctcagagtggatgatgat
gtgccgtctcacaccgtgatcaccggctctgacctcttcatcgaaaacctcaacaagtcg
tacaacggcacgtaccgctgtgttgcctccaacaccgtgggggatgcctacgatgactat
atcctctttgtatatgactccagagctggtgagggggcgccacagaagatagaccacgct
gtcatcggaggtgtggttgccgtggtgatgttcgctatcctctgtgcactcatcgtcctg
gggcgctacttcgccagacacaaaggcacctacttcacacatgaagccaaaggggcagac
gacgcagcagatgcagacacggccatcattaatgcagaggggggacacaacaacacggaa
gagaagaaggagtactacatctaa
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