KEGG   Salvelinus namaycush (lake trout): 120028439
Entry
120028439         CDS       T07522                                 
Name
(RefSeq) cell adhesion molecule 1-like
  KO
K06781  cell adhesion molecule 1
Organism
snh  Salvelinus namaycush (lake trout)
Pathway
snh04514  Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:snh00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    120028439
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:snh04515]
    120028439
Cell adhesion molecules [BR:snh04515]
 Immunoglobulin superfamily
  Nectin family
   120028439
SSDB
Motif
Pfam: Ig_3 I-set ig Ig_2 C2-set_2 V-set C1-set KOW2_Spt5 Adhes-Ig_like Syndecan
Other DBs
NCBI-GeneID: 120028439
NCBI-ProteinID: XP_038829586
UniProt: A0A8U0PPD4
LinkDB
Position
Sna34:23288366..23333967
AA seq 407 aa
MGRIQMDEDGGCDEPMLQVHEGSVDRWRPCERYFGRVEGQNLGTDNVSVIEGEMATISCR
VKNNDDSVIQLLNPNRQTIYFRDVRPLKDSRFQLVNFSDNELRVSLSNVSLSDEGRYVCQ
LYTDPPQEAYADITVLVPPGSPIMDSREDVVSEGNETELTCTAMVSKPAASIRWMKGEQE
LTGEMTVDETYDRMFTVTSRLRLTVSKEDDGEPVSCIIDHPAVKDLRAQRYLEVLYQPEV
KIVQAFPEGLTREGENLELTCIAKGKPQPHQISWLRVDDDVPSHTVITGSDLFIENLNKS
YNGTYRCVASNTVGDAYDDYILFVYDSRAGEGAPQKIDHAVIGGVVAVVMFAILCALIVL
GRYFARHKGTYFTHEAKGADDAADADTAIINAEGGHNNTEEKKEYYI
NT seq 1224 nt   +upstreamnt  +downstreamnt
atgggacggatccagatggacgaggatgggggctgtgatgaaccgatgcttcaggtccac
gaaggctctgtcgaccgctggagaccatgtgaacgttactttgggagagttgaaggtcaa
aacctggggactgataatgtgtcagtgatcgagggggagatggcgaccatcagctgcagg
gtgaagaacaatgatgactcagtcatccagctcctcaaccccaacagacagaccatctac
ttcagagacgtcagacccctgaaggacagccggttccagctggtgaatttctccgacaac
gaactgcgggtgtctctgtccaacgtgtctctctcagatgagggacgctatgtgtgccag
ctctacacagaccctcctcaggaggcctacgcagacatcactgtgctggtcccaccagga
agtccaatcatggattcccgagaggatgtggtcagtgaggggaacgagacagagctcacc
tgtacagccatggtcagcaagcctgccgcctccatcagatggatgaaaggagagcaggag
ctgacaggcgagatgacggtggatgagacctatgacaggatgttcacggtcaccagtcgg
ctgagactcactgtgtccaaggaggatgacggagagccagtcagctgcatcatcgaccac
ccagccgtgaaggacctccgggcacagagatacctggaagtgctatatcaaccagaagtg
aagatcgttcaggcattccctgaaggtttaacgagagagggagagaatctagagctgacg
tgcatagcaaaaggcaaaccacagccccatcagatcagctggctcagagtggatgatgat
gtgccgtctcacaccgtgatcaccggctctgacctcttcatcgaaaacctcaacaagtcg
tacaacggcacgtaccgctgtgttgcctccaacaccgtgggggatgcctacgatgactat
atcctctttgtatatgactccagagctggtgagggggcgccacagaagatagaccacgct
gtcatcggaggtgtggttgccgtggtgatgttcgctatcctctgtgcactcatcgtcctg
gggcgctacttcgccagacacaaaggcacctacttcacacatgaagccaaaggggcagac
gacgcagcagatgcagacacggccatcattaatgcagaggggggacacaacaacacggaa
gagaagaaggagtactacatctaa

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