Salvelinus namaycush (lake trout): 120028479
Help
Entry
120028479 CDS
T07522
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 3-like
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh00061
Fatty acid biosynthesis
snh00071
Fatty acid degradation
snh01100
Metabolic pathways
snh01212
Fatty acid metabolism
snh03320
PPAR signaling pathway
snh04146
Peroxisome
snh04216
Ferroptosis
snh04920
Adipocytokine signaling pathway
Module
snh_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
120028479
00071 Fatty acid degradation
120028479
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
120028479
09143 Cell growth and death
04216 Ferroptosis
120028479
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
120028479
03320 PPAR signaling pathway
120028479
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
snh01004
]
120028479
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
snh04147
]
120028479
Enzymes [BR:
snh01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
120028479
Lipid biosynthesis proteins [BR:
snh01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
120028479
Exosome [BR:
snh04147
]
Exosomal proteins
Exosomal proteins of breast milk
120028479
Exosomal proteins of breast cancer cells
120028479
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
120028479
NCBI-ProteinID:
XP_038829612
UniProt:
A0A8U0PSM8
LinkDB
All DBs
Position
Sna34:complement(30373853..30398479)
Genome browser
AA seq
560 aa
AA seq
DB search
MKLKEDLNPVLLLLFQVTVWLYSVLAFLPSYLFSSVSESDAGLGSEQERAQRLKARSVTG
CPAGPYRAMGATKRLVSSLHPGVDTLDKVFEDASRRFPDRDCLGTREVVMEEDERQSNGK
FFKKVILGQYRWLSYAETHRAAACFGIGLAALGQRAHNNIAIFCETRAEWVIAAQACFMQ
NFPLVTLYSTLGGPAITHGLNETEVSHIITSRELLETRLKLSVLQEIMDRIYKNVMTKVE
EMSSAQRTLFTLAYNYKLEQLSQGRSTPLCDNLVFKKVRSLLGGKTRVLLSGGAPLSAAT
QRFINVCFCCPVGQGYGLTETCGAGTISEMWDYSTGRVGGPLVCSEIKLKDWVEGGYHIT
DTPTPRGEILIGGPNVTMGYYKNESKNQDFFVDENGQRWFCTGDIGEVHPDGCLKIIDRK
KDLVKLQAGEYVSLGKVEAMLKNCPLIDNICAYANSDEMYVIGFVVPNQKHLLLLAEQYL
IRGSWEELCDNAAMEEVVLQVITEAALSAQLERFEIPRKIRLSPDPWTPETGLVTEAFKL
KRQQLKSKYQDDIERMYGGK
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgaaagaggatctgaacccagtgctgctgctgctcttccaggtgacggtgtgg
ctgtactctgtcctagccttcctaccctcctacctcttcagctctgtgtcagaatcagac
gcaggcctcggctcagaacaggagcgggctcagagactcaaggcccggtctgtgacgggt
tgccccgcggggccctacagggccatgggcgccacaaagaggctggtgtcgtccctgcac
cctggggtggacacactggataaggtgtttgaggatgcatccagaaggttccctgacaga
gactgcctgggcaccagagaggtagtcatggaggaggatgagaggcagagcaacggaaag
ttcttcaagaaggtgatccttgggcagtaccgctggctgtcctatgccgagacccacagg
gcagcagcctgctttggcattggtctggcagcgcttggccagagggcccacaacaatatt
gccatcttctgtgagaccagggccgagtgggtaatagccgcacaggcgtgcttcatgcaa
aacttccccttggtcactctgtactctaccctggggggtccagccatcactcacggtctg
aacgagacagaggtcagtcacatcataaccagcagagagctactggagaccagactcaag
ctctctgtgctacaggagattatggatcgtatctataagaatgtgatgaccaaggtggag
gagatgagcagtgctcagaggactctgttcactctggcctacaactacaagctggagcag
ctctcccagggacgcagcacgccactgtgtgacaacttagtgtttaagaaggttcggtcc
ctcctgggggggaagaccagggtgctgctgtcgggtggggcacccctctctgccgccacc
cagcgcttcattaatgtctgcttctgttgccccgtgggccagggctatggcctcaccgag
acctgcggagctggaaccatcagcgagatgtgggactacagtacagggcgagttggagga
ccactcgtttgttctgaaatcaagctcaaggattgggtggagggtggctaccacatcaca
gacacgcccaccccacgaggtgagattctgattggcgggcccaatgttaccatgggttac
tacaagaacgagtccaagaaccaggacttctttgtggatgaaaacggccagcgctggttc
tgtacgggagacataggagaggtccatcctgatggatgcctcaagatcattgatcgtaag
aaggacctggttaagctccaggcaggagagtatgtgtctctggggaaggtggaggccatg
ctgaagaactgcccccttatagacaacatctgtgcctacgccaacagcgatgagatgtac
gtgattggctttgtggtgcccaatcagaagcatctgcttttgctggcggagcagtatctt
atccggggctcatgggaggagctgtgtgacaacgctgccatggaggaggtggtcctgcag
gtcatcaccgaggccgccctatcagcccagctggagcggtttgagatcccccgtaagatc
cgtctgagccccgacccctggacccccgagacgggcctggtgaccgaagccttcaagctc
aaacgccagcagctgaaaagcaagtaccaggacgacatcgagagaatgtacggcgggaag
tag
DBGET
integrated database retrieval system
