Salvelinus namaycush (lake trout): 120028490
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Entry
120028490 CDS
T07522
Symbol
trpc2a
Name
(RefSeq) short transient receptor potential channel 2
KO
K04965
transient receptor potential cation channel subfamily C member 2
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
snh04040
]
120028490 (trpc2a)
Ion channels [BR:
snh04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
120028490 (trpc2a)
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GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
PKD_channel
Ank
Motif
Other DBs
NCBI-GeneID:
120028490
NCBI-ProteinID:
XP_038829621
UniProt:
A0A8U0TVR1
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Position
Sna34:33509128..33515078
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AA seq
884 aa
AA seq
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MENITPDQWQAIVNKKLTFPPELITAIQEDNSILVGSLLSTGDGIIRQLDESEDRLWREA
LNLSIRMGNEDIFSALMLGVKFDFRQIYEALLVAVDTNQPRVVKRLLDRLDQEKGNKMDV
RSFSMAIFDHSIDDSQFAPGVTPLTLACQKDLYDIVTMLTKKGHAIPLPHSISCTCLECR
NGRQYDLLKFSLSRINTYRGMASRAYLSITTEDAMLSAFRLSRELRKLSKKEPEFKPQYL
SLEELCQEFAVEMLAMCRNQSEVTTILNICDEDNEDELDEQTFEEGIPTLSRIRLAVNYN
QKLFVSHPICQQVLSSIWCGNIPGWRGSKTVWKLTVSLGIFFTMPLLCMIYWVAPKSKIG
KTLKIPVIKFLLHSASYLWFIITLLAESIFMELYRDEFASRQQNILYNSLHMIWVVGFFW
SECKNVWAEGLRGYIVDWSNILDMIVLSMYLASFGLRVLIMAIGHFVCQDQNLVEKCAYF
TQTVRDEWWQEDPQLISEILFAVTSMLSFTRLAHILPAHESLGTLQISIGIMIDDMMRFM
FLLMIIGTAFLCGLNNIYVPYATSPHLGRFNETFNFLFWTMFGASNQGYVDMPDFVLAQF
VGRVLYGVFTLVIVIILLNLLIAMITNSFQKIEDDADVEWKFARSKLYLSYFREGSTIPV
PFNLVPTPKALFYLLRSFFCCCNRKKIPDYPPIASVSNSTMNNSGEAGIDRVSYRLQVVK
ALVQRYIEAARREFGEATRKDVGNRITELNKGVGRLHSDMKKFHQNLQNNKSFGSKGDGG
DFLGKYIKGAKNNFKNFDKNEAMGNSPDLLRVNLHLVGVVEEGKKEEGKTEMIPEVFTEK
NTPTNNSESSPDISPESHSGQEFLERDTESTCTQGTVEENTNII
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atggagaatattacgccagaccaatggcaggcgattgtgaacaaaaagcttactttcccc
ccggagctgataacagccattcaggaagacaactcaattctggtgggcagcctgctgtcc
acaggggacggcatcatccgccagctggatgagtctgaggaccgtctgtggagagaagcc
ctgaacctgtccatccgcatgggcaacgaggacattttctccgctctgatgctgggcgtc
aagtttgacttcaggcagatctacgaggcgctgctggtggcggtggacaccaaccagccc
cgggtggtcaagaggctcctggaccgcctggaccaggaaaagggcaacaagatggatgtg
cgctccttctccatggccatatttgaccactccattgacgactcccagtttgcccccgga
gtgaccccgctcaccctggcctgtcagaaggacctgtatgacattgtcaccatgttgact
aagaaaggtcatgccatccctctgcctcactctatctcctgtacctgtctggagtgcagg
aacggccgtcagtatgacctgctgaagttctctctgtctcgtatcaacacctaccggggc
atggccagccgggcatacctctccatcaccacagaggatgccatgctcagtgccttcaga
ctcagtcgggagctacgcaagctctccaagaaagagcctgaatttaagccccagtacctg
agcctggaagagctgtgtcaggagttcgcagtggagatgctggccatgtgtcgcaaccag
agtgaggtcacaacaatcctgaacatctgtgatgaagataatgaagatgaactggacgag
cagaccttcgaggaggggattccaaccctgtcacgcatacgccttgcagtcaattacaat
caaaaactgtttgtgagtcatcccatctgccagcaagtgctgtcgtccatttggtgtgga
aacatcccagggtggcggggcagcaagacggtctggaaactcacggtgtctcttgggatc
ttcttcaccatgcctctcctctgtatgatctactgggtcgctcccaagtccaagattgga
aagactttgaagatacctgtgatcaaattcctgctgcactctgcctcctacctgtggttc
atcatcacccttctagctgagtctattttcatggagctgtaccgcgatgagttcgcatcc
cggcagcaaaacatcctctacaactccctccatatgatctgggtggtcggtttcttctgg
agtgagtgtaagaatgtgtgggcggagggtctgaggggttacatcgtggactggtccaac
attctggacatgatagtactcagcatgtacttggcctccttcggtctgagagtcctcatc
atggcaattggtcactttgtttgccaagaccaaaacttggttgagaagtgtgcctacttc
acccaaacagtgcgggatgaatggtggcaggaggaccctcagctgatctcagagattctg
ttcgctgtgaccagcatgctcagcttcacccgactggcccacatcctgcctgcccatgag
tctctgggtactctgcagatctccattggtataatgatagatgacatgatgaggttcatg
tttctcttgatgatcattggaacagcttttctctgtggactgaataatatctatgtgccc
tacgcaacttctccacatcttggacgcttcaatgaaaccttcaactttctcttctggacc
atgtttggtgcatctaatcaaggctatgtggacatgccagattttgttctggctcagttt
gtgggcagggtcctgtatggggtcttcactctcgtcattgtcattatcctgctcaatttg
cttatcgccatgatcactaattcattccagaagatagaggatgatgctgatgttgaatgg
aagtttgctcgttcaaagctctacttgagttacttcagagagggctccactataccggta
cccttcaacctcgtccccactccaaaggccttgttctacttactgaggagctttttctgt
tgttgcaaccgaaagaaaattccagactatcctcctattgcctctgtgtccaacagtaca
atgaacaacagtggagaggcagggatagaccgagtgtcataccgcctgcaggtggtcaag
gcgctggtacagcgctacatagaagcagcccgcagggagtttggagaggcgacacgtaaa
gatgtggggaacaggatcacagagctgaacaagggggtggggagacttcactctgatatg
aagaagttccatcagaacctgcagaacaacaagtccttcggctcaaagggcgatggaggc
gacttcctgggcaagtacataaaaggagcaaagaacaactttaagaactttgataaaaat
gaggcaatggggaatagcccagacctgttacgagtcaatctgcacctcgtaggggtggtg
gaggaggggaagaaagaggaggggaaaacagaaatgatcccagaggtgtttacagagaaa
aacacccccacaaacaacagtgagagctccccagacatcagccctgagtctcatagtggg
caggagttcctggagagagacacagagagtacctgcacacagggaacagtggaggaaaac
actaacatcatatag
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