Salvelinus namaycush (lake trout): 120028534
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Entry
120028534 CDS
T07522
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 32-like
KO
K11837
ubiquitin carboxyl-terminal hydrolase 6/32 [EC:
3.4.19.12
]
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
snh01002
]
120028534
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
snh04121
]
120028534
Enzymes [BR:
snh01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
120028534
Peptidases and inhibitors [BR:
snh01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
120028534
Ubiquitin system [BR:
snh04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
120028534
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
DUSP
EF-hand_7
EF-hand_6
EF-hand_1
EF-hand_5
UCH_1
Ubiquitin_3
EF-hand_8
Ubiquitin_2
DUF2621
Motif
Other DBs
NCBI-GeneID:
120028534
NCBI-ProteinID:
XP_038829653
UniProt:
A0A8U0TV98
LinkDB
All DBs
Position
Sna34:complement(40219120..40294504)
Genome browser
AA seq
1717 aa
AA seq
DB search
MGAKESRIGFLSYDEAVKRVTDVELKRLKDAFKRTSGLSFYMAQQCFYREVLGDGIPPKV
AEVIYNSFGGTFKGLHFNNLIIGLVLLTRGRDGEKAKYLFSLFASESGGYAARDDMEAVL
RAVDGEVPPSLRKCFSEGEKVNYERFRNWLLQNTEAFTFSRWLLSGGVSVTLTDDSDTPT
FYQTLAGVTHLEESDIIDLEKSYWLLKAQSRTGRFDLETFVPLVSPPIHASLSEGLFHAF
DENRDNHIDFKEISCGLSACCRGPVAERQKFCFKVFDVNRDGVLSRDEIHEMVVALLEVW
KDNRTDTLPELLTNVPDIVEGILKMHDTTKLGHLTLEDYQIWSVQSVLANEFLNLLFQVS
HIVLSLRPATPEEEGQIIRGWLDREGRHGLQPGENRFLISSQWWTLWKDYVRYDHKSIVV
DQPSILSSLRNPQASATVEPAPLEPGVGEGLGVPSPASPSEERSPDAVSSASEATETHST
VVTTQAGPSATDICFARQHNVSDNNQCFSGANGHIPSLSQSHLAAQRPGAIDNQPLVNTD
PMKAPSLTMEGGRLKQSLQLVAGRDFETVPEPVWRALFHWYGANLSLPRPVIQQTETGCA
ELELFPRYLLFLRQQPATRTPQSNIWVNMGMTSLRMFPQHLPRGNVPSPNAPLKRVLAYT
GCFSRVGTIKDIHLYLSRRLRIKDEDMRLWLYNSENYLTLLDDEDHTLEDLKIQDEQHLV
IEVRNKDMSWPEEMSFIANSSKMDRHKVATEKGATGLSNLGNTCFMNSSIQCVSNTTPLT
DYFISGRHLYELNRTNPIGMRGHMAKCYGDLLMELWSGAQKNVAPLKLRWTIAKYAPRFN
GFQQQDSQELLAFLLDGLHEDLNRVHEKPYVELKDSNGRPDWEVASEAWENHLRRNRSIV
VDLFHGQLKSQVKCKTCGHISARFDPFNFLSLPLPMDSSMHLEITVIMLDGSTPVRFGLR
LNMDDKYTGLKKQLSELCSLKPEQILLAEVHSSNIKNFPQDNQKVRLSVNGFLCAFEIPV
PGSPTSLSSPTQTDITPVPVANGVAVTDEGHPAGNPDLIPNGMPSAVVPCREATERALVN
GGLGVPNGGLGVPNGHVSPVQDSPFIGYIIAMHRKMIRTELYFLSSQKNRTSLFGMPLIV
PCTVHTSQKDLYDAVWIQVARLASPLPPQEASNHAQDCDDSMGYQYPFTLRVVGKDGNSC
AWCPWYRFCRGCAVDCTEDRASVETAYIAVDWDPTAIHLRYRTSQERIVEEDCSVQQSRR
AQAEPISLDSCLKAFTSEEELGEDELYHCSKCKTHRLATKKLDLWRLPPILIVHLKRFQF
VNGRWIKSQKIVQFPRERFDPSVYLAPREAGLNGLHGLQSRSEGEELLRIGGGETVSSIS
APTGLLNILKASPASGRKSAPPSFISRTSSPCSSPKTGGGGPGGTGHRQTRLRLPQLASR
HRLSNSKENLEGSTRERGSGPDTEPREGAPQADTEGGLVGVMSGGFGEVGVRSGPEMSTT
DASSSLSNVIVMNGDSGGRSNELLSTEASTEPSTDLETTATAQLHQRDNSLESIYNLYAI
SCHSGIMGGNRRFSLCLHSAIQVSWEVIGGSLSVSQCHSGIMGGNRRFSLCLTVPFRYHG
REVLSLSPQCHSGIMGGGHYVTYAKNPNNKWYCYNDSSCKEVHSEEMDTDSAYILFYEQQ
GVDFSQFLPKTDGKKMADTTSMDEDFESDYKKYCVLQ
NT seq
5154 nt
NT seq
+upstream
nt +downstream
nt
atgggtgccaaggagtcaaggataggtttcctttcgtatgatgaggccgtcaaaagagta
actgatgtggagttgaagcggctgaaggatgcctttaagaggaccagcggcctgtccttc
tacatggcccaacagtgcttctacagagaagtactgggagatgggatccctccgaaggtt
gcagaggtgatctacaactcgtttggaggcacctttaaaggactacactttaacaacctc
atcattggcctggtgctgctgaccagaggacgagatggggagaaggccaagtacctcttc
agcctgtttgccagtgagtcgggtggctatgcggcgcgggatgacatggaggccgtacta
cgggcggtggacggggaagtcccgccctctctcaggaagtgcttcagcgagggggagaaa
gtcaactatgagcgctttaggaactggctccttcagaacacggaggcgttcaccttctcc
cgttggctgctctccggaggcgtgtctgtcaccctcacagacgacagcgacacgcccacc
ttctaccagactctggccggagtcacacacttagaagagtctgatatcattgacttggag
aagagctactggctgctgaaagcccagtccaggaccggacgctttgacttggaaaccttt
gtcccgctggtctctcctcccattcacgcttcgctaagtgaaggtttgtttcatgccttt
gatgagaaccgggacaatcacatagactttaaggagatctcctgtggcctgtctgcctgt
tgccgggggcccgtcgccgagcggcagaaattttgtttcaaagtttttgatgtgaaccgg
gatggggttctgtctcgagacgaaatccatgaaatggtggtcgcactcctggaggtgtgg
aaagacaatcgcacagacacactccccgaattgctcaccaacgtgccggacatagtggaa
ggaatcctgaagatgcacgacacgaccaagctgggtcacctgaccctagaggactatcaa
atatggagtgtgcagagcgttctggccaatgagttcctcaacctgctgttccaggtgtcc
cacattgtcctgagccttcggcctgctactcctgaagaggaggggcaaatcatcaggggg
tggctggacagagagggcagacatgggcttcagcctggtgagaacaggtttctcatctcc
agccagtggtggacgctgtggaaagactacgtcagatatgaccacaagtccatcgtggtg
gatcagccctctatcctctcctctctgaggaatcctcaggcctctgccaccgtcgagcct
gcccccctggagccaggggtaggtgaaggtctgggggtccccagcccagccagcccctca
gaggagaggtcccctgatgctgtgtccagcgcctctgaagccacagagacccacagcaca
gtggtgaccacccaggccggcccctcagccacagatatctgttttgcccggcaacacaac
gtgtcagacaacaaccagtgtttctctggggccaacggccacatcccctccctctctcag
tcccatctggcagctcagaggcctggagccatcgacaaccagcccctggtcaacacagac
ccaatgaaggccccctcattgaccatggagggaggccggctgaagcagtccttacagctg
gtggcgggcagggactttgagacggtaccagagcctgtgtggagggcactgttccactgg
tatggagccaacctcagcttgccgcgaccggtgatccagcagacagaaacaggctgtgct
gagctggagctcttcccacgctatctcctcttcctgcggcagcagcccgccacacgcacc
ccccagtccaacatctgggttaacatgggtatgaccagcctgagaatgttcccccagcac
ctccccagaggtaacgtgccctcccccaacgctcctctgaagcgtgtcctggcctataca
ggctgtttcagccgcgtgggcaccatcaaggacatccacctgtacctgtctcggaggcta
cgcatcaaagatgaggacatgaggctgtggctctacaacagcgagaactatctgaccctg
ctggatgatgaggaccacactctggaggacctgaagatccaggacgagcagcacttagtt
atcgaggttcggaacaaagacatgagctggccagaagagatgtccttcatcgctaacagc
agtaaaatggaccgacataaagttgctacggagaagggtgccacgggcctcagtaaccta
ggcaacacgtgctttatgaactctagtatccagtgtgtgagcaacaccacgcccctcact
gactacttcatctcaggaagacacctctatgaactcaacagaaccaatcccatcgggatg
cgaggtcacatggctaaatgttacggagacctgctgatggagctgtggagtggagctcag
aagaacgtcgctcctctcaaactcaggtggacgatagcgaagtacgccccgcgtttcaac
ggcttccagcagcaggacagtcaggagctcctggccttcctattggacgggctccatgag
gacctgaacagggtgcatgagaaaccctacgtagagctgaaggacagcaacggacgaccc
gactgggaggtcgcgtcagaggcgtgggagaaccacttgcggaggaaccgttccatcgtg
gtggatctgttccacggccagctcaagtcccaggtcaagtgtaagacgtgtggtcacatc
agcgcccgcttcgaccccttcaacttcctgtctttacccctccccatggacagctccatg
cacctggagatcactgtcattatgctggatggttctacccctgtacggttcggcctgagg
ctcaacatggatgacaagtacaccggtctgaagaaacagctgagtgagctgtgtagtctg
aaaccagaacagatactactggctgaggtccacagctccaacatcaagaacttccctcag
gataaccagaaggtgcgtctgtcggtgaacggcttcctgtgcgcgtttgagatccccgtc
ccaggctcccccacctccctctcctctccaacacagacagacatcacccctgtgcccgtg
gctaacggagtggcggtgacagatgaagggcatcctgccggtaaccctgatctgatcccc
aacggcatgcccagcgccgtggtgccctgcagagaggccacagagagagccctggtcaac
ggagggctgggggtgcccaacggagggctgggggtgcccaacggacacgtgtcccccgtc
caggacagtcccttcattgggtacatcattgccatgcacaggaagatgatccggacggag
ttgtatttcctgtccagtcagaagaaccgtaccagtctgtttgggatgcctctgatcgtt
ccctgtacggttcacaccagtcagaaggacctgtacgatgctgtctggatacaggtggcc
cgtctggccagccctctgcccccgcaggaggccagcaaccatgcacaggactgtgatgac
agtatgggttaccagtaccccttcacactgagagtggtggggaaggatggcaactcatgt
gcctggtgtccctggtacaggttctgtcgaggctgtgcggtggactgtacggaggacagg
gcctcggtagaaaccgcctacatagctgtcgactgggatcccactgccatacaccttcgt
taccggacctcacaggagaggatagtggaggaggactgtagtgtgcagcagagtcgcagg
gcccaggctgagcccatcagtctagacagttgtctgaaggccttcaccagtgaggaggag
ctgggagaggatgagctctaccactgctctaagtgcaagacccaccgcctggccaccaag
aagctggacctgtggaggctaccgcctatactgattgtacacctgaagaggttccagttt
gtgaacggccgctggatcaagtctcagaagatcgtccagtttcccagagagaggtttgac
cctagtgtttacctggctcctcgggaggcggggcttaacgggctacacggtctgcagagc
cgcagcgagggggaggagctactgaggataggaggaggagaaacggtctcctccatctcc
gcccctactgggctcctcaacatcctcaaagcctctccagcgtcaggcaggaagtcagcc
cctccctccttcatcagccgtaccagcagcccctgcagcagccccaagacaggaggaggc
ggtccagggggcacgggccacagacagacccgcctcaggctcccccagctggccagccga
caccgcctctccaacagcaaggagaacctggagggtagtaccagggagaggggcagcggc
cctgacacagagcccagggagggagcaccgcaggcggacacggagggtgggctcgtgggg
gtgatgagtggaggttttggggaggtcggggtgaggagcgggccagagatgtccaccaca
gatgcgtccagcagcctcagtaatgtcatcgtgatgaacggggacagcggtggccgtagc
aacgagctactaagcacggaggccagtacggagcccagcacggacctagagaccactgca
acagcccagctgcaccaaagagataacagcctggagagcatctataatttatatgctatt
tcatgccattcaggtatcatgggaggtaataggaggttctctctctgtctccacagtgcc
attcaggtatcatgggaggtaataggaggttctctctctgtctcacagtgccattcaggt
atcatgggaggtaataggaggttctctctctgtctcacagtgccattcaggtatcatggg
agggaggttctctctctgtctccacagtgccattcaggtatcatgggaggaggacactat
gtgacctatgccaaaaaccccaacaataaatggtactgttacaacgacagcagctgtaag
gaagtgcactcggaggagatggacacggactcggcctacatcctgttctatgagcagcag
ggagtggacttctctcagttcctgccaaagactgacggcaagaagatggccgacaccacg
agcatggacgaggattttgagtctgactacaagaagtactgtgtccttcagtga
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integrated database retrieval system
