Salvelinus namaycush (lake trout): 120028560
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Entry
120028560 CDS
T07522
Symbol
atm
Name
(RefSeq) serine-protein kinase ATM
KO
K04728
serine-protein kinase ATM [EC:
2.7.11.1
]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03440
Homologous recombination
snh04068
FoxO signaling pathway
snh04110
Cell cycle
snh04115
p53 signaling pathway
snh04210
Apoptosis
snh04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
120028560 (atm)
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
120028560 (atm)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
120028560 (atm)
04210 Apoptosis
120028560 (atm)
04115 p53 signaling pathway
120028560 (atm)
04218 Cellular senescence
120028560 (atm)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
snh01001
]
120028560 (atm)
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
snh03032
]
120028560 (atm)
03036 Chromosome and associated proteins [BR:
snh03036
]
120028560 (atm)
03400 DNA repair and recombination proteins [BR:
snh03400
]
120028560 (atm)
Enzymes [BR:
snh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
120028560 (atm)
Protein kinases [BR:
snh01001
]
Serine/threonine kinases: Other
PIKK family [OT]
120028560 (atm)
DNA replication proteins [BR:
snh03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
120028560 (atm)
Chromosome and associated proteins [BR:
snh03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
120028560 (atm)
DNA repair and recombination proteins [BR:
snh03400
]
Eukaryotic type
Check point factors
Other check point factors
120028560 (atm)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PI3_PI4_kinase
FAT
TAN
HEAT
HEAT_ATR
TTI1
TPR_ATM
DUF3349
Motif
Other DBs
NCBI-GeneID:
120028560
NCBI-ProteinID:
XP_038829680
UniProt:
A0A8U0PR34
LinkDB
All DBs
Position
34:24242261..24276115
Genome browser
AA seq
2957 aa
AA seq
DB search
MSLVLHELLVCCRGLENDKATERKKEADRFRQLIRSPDTVEELDRISGTRAAKSSKQLTW
NAVFRFLQKYLQKETELLQSGKANVSATTQANRQKKMQEISSLVKYFIRCANKRGPRLNC
GELLNHVMEILRSSFSCSAYGEDYSSILLKNILSVRKYWCEITQQQWHNLLDLYCGLFTG
SSKAINRVLVSRIIHTAVQGCCLQTEGFSHTLFSFFSRALLNARQERHLAVVEHLVSALN
VFLRSAAMNCRIRVCRLGEELLPSVLYVWTQMRPSTTLKEEIVEFFNLQLCVHHPKGSTT
QDTGAYAEDWVKWQSLLYNLYDALVSEISQIGSRGKYATGSRHIAVKENLMELTAEICHQ
LFSEDCNLQILEVTQAHLRATQRGSPHGTPSKRRRIELGWEVLRDHLQPHHSDFDIIPWL
QITSVLTSKYPSMVPGQELVPLLSVLCQLLGEQRRGDRGPYVLRCLREVARCQATHPERA
QSYRVELGRLWGRVWALALRGVSSPQTEALSLALLSTILQGAFIPIDRELWKLFSGSACK
PSDAAALCLAQALLKCPVLKSLGTGWDHAGAVEGVGPPSLKENIMSWLLMNEQSEEAEES
SRPHPIICRDFPHNLIPRILVPLTLKDTRAGIMFLLGAKGLESAVMQDQTQVEVKGALSE
IESMYLQFSFDEMPSNPMVKEMVSSAGTQLTVVPSLKHKLEQGLLSVADHLLNCYSPDSQ
TTPPECLVRCSSLLTGVLAGYVSTGLLTEEEACHSQLFLKAKALVQDFSEYISNVKVKMA
EDGTMTTLRSVMRLCTQCVNRGVKDSMSSVSCNLFMKIFPARLLTELAEICKLLLNSSCK
RGSVGIEEETTDEDWDMTRTQADQQEDIDLFDDGDEPQTSTSKGTHRQNVDPNDTQCGPD
AKSLLAEEHLAQQDLAILASLEFLSLCVSAEFIHGLSFKPVEVRRKLLLLLEQIDCTKPL
HLNMYLVLLKKLPAEDTSLAAEEFDSLLSPLADLCSLYRQDQEICAAVLLGLLPSIRSLG
RTQDQHNDMRHVQGALLQVVSGFCILGRTGKCTAIVKVALIHCLLALLEADPCCKWAVLT
LREEELPVSVILPSHLSDSHHHVRMLAAMTVERLFLEMTPDSLEKRKMLPLKCQQTAFEN
IYLKAQEGMRVQKNSSPEDLSDETFNRKATLLKSVSVVLCCSPVCEKQSLFALFQSYKEN
NIEEPLIKKVLGSVSRALGYRSVEAFVSSHLDYLVAEWLGQHGYTLESFPYTLLNHATLK
DFYSSSYQVLIPHLVFLDDFKQVKSISTHLGKDWKKLLANCFPKIMVNILPYFAVSGQDA
QVAQQREKAHRVYDLLKDSNCLGKPQIDSLIHSNLSDIVVELLMTLYEGAATEEGGRGDL
RRFIGELDPAPNPPYFSSYVIKATLDYLSSCHSANLKSLVAILSKTPISIQRILLAVCQK
AAETINAYERHRILLIYYLFVSLLLKEVKDGLGGAWAFVLRDIIYTLIHHINSRPAQLDE
VSSRSFSLCCDLLTSVCRTAVQFCDDAVESHLQVIVGTLTAQVTNQLAISQQVLSLLKFL
VVESQDKLKSAIQKLEPFPDRPEFRELRAVQHTLKYSTGKFTLRQEIAHFLSVASCDSLP
LTRLEGLKDLRRQLHNNKSQIRPLLRECLADPEESVLVLLVLNLLQLCKLAANHPGGRDI
LEAAGSCLGELGPVDFSTIALLHGKDQLNARAVSLFSPVEPQWLYIILNCINNALTHHCI
EVRQAAVQSLKDILATQAGADFWEIHKDNRDPMLAYLNPFRSTKKKVVGMSEEVSLVARE
RLESQDLWVPEAGGHKAWLKTLCMVLLDSGGVRSEALLLSRPLCLVKTDFCQRVLPLIIH
DILLGDSDGSWRKLLSTHIQDFFTSCSSRARASSRSTTPLPSDSGESDISNQGPLDKASL
RTMLSVINYLRQQQRPLESDSNLCGTVCHSNFWLELNYLEVARAAQSCSAHFTALLYSEI
YVDKIKTNMEENRRNPARASRRITFDESSQNFPIFSLTEESVKDTGISLQDLLIEVYRSI
GEPDSLYGCGGGKMTSALTRIRTYEHEAMWGKALTSYDLHSNLPDGTRQVGIVEGLQNIG
LSSILATYLRGLESEGVEWGAELRELRFQAAWRNMQWDCDLSERNEKLNPGFNESVFCSL
QALRDKEFSTFDQTLKYARGNEVEELCRGSLEAVSSLYPALRNLQRISELESIRQLFSKP
LTDVGLAEVCSHWQQHSQLLADSDFTLVEPILALRSVAQETLISQERDPEKNKYLSTVLT
SHLMELCQLARAAGNTQLAERAVFQMKQHGGGGARGSTASSWQLEEAQVFWAKREQGLAL
GLLRQMIHTLEEQVNFNPALVPVFTECLRLCGNWLAETCLESPGVILEKYLERAVEVIEG
HAIGSDTKLQSQRTQAFLSLARFSDAQYQGIDNYMKSSEFENKQALLEKAKEEVDLMRER
KVGTNRYTVKVQRELELDERALSNLQADRRRFLCKAVENYIHCLEQGEEHDTWVFRLASL
WLENADVKIVNDMMKGGVNRIPSYKFLPLMYQLAARMGTKMSATVAEDVGFHGVLNELIC
LSCLEHPHHTLFIILALVNANKDESFSRSRLSKSTPRHSSQLDLERSEVAQRIMNKIRKK
RAQMIRGIEVLCDAYITLAYMDASRHKTEKKAILIPSDQPIMQIKNLDDVIIPTMEIKVD
PSGKYDNLVTIKSFKPHFHLAGGVNLPKIIDCVGSDGKSRRQLVKGQDDLRQDAVMQQVF
HMCSMLLQRNTETRKRKLNIRRYKVVPFSQRSGVLEWCSGTVPIGDFLIDPQKGAHTRFC
PQDWTSITCRKKMMESQRLGSGGKTQAFSEVCQNFRPVFRYFCMERFLDPAVWLEKRLAY
TRSVATSSIVGYIVGLGDRHIQNILIDEQTAELVHIDLGVAFEQGKILPTPETVPFRLSR
DIVDGMGITGVEGVFRR
NT seq
8874 nt
NT seq
+upstream
nt +downstream
nt
atgagcttggtcctacacgagctcctggtctgctgcagaggtttagagaatgacaaagca
actgagagaaagaaagaggctgatcgcttcagacagctcatccggtctcctgacacagtg
gaggagctggatcgcatttctggaaccagagctgctaaaagttccaagcagctcacctgg
aatgcagtcttcaggtttctgcagaagtatctgcagaaagagactgagctgctccagtca
gggaaagccaacgtgtcagccaccacacaggctaaccgtcagaagaagatgcaggagatc
agcagcctggtcaaatacttcatccgctgtgccaacaagagagggcctcggctgaattgt
ggtgagctcctgaatcatgtgatggagattctgcggagctcattcagctgctcggcctat
ggggaggactacagcagcatcctgctcaagaacatcctgtctgtccgcaagtactggtgt
gagatcacccagcagcagtggcacaatttgctggatctgtattgtggccttttcactggt
tcctccaaggccataaatcgtgtgcttgtgagcaggatcatccacactgcagtccagggc
tgctgtctgcagactgagggcttcagccatacactcttcagcttcttctccagagcactg
ctcaatgccaggcaggagagacacttggcagtggtggagcacttggtctctgctctgaac
gtcttcctgaggtctgctgccatgaactgccgtatcagggtgtgtcggctgggtgaggag
ctcctgccctctgtgctctatgtgtggacacagatgaggcccagcaccactctcaaagag
gagatagtagagttcttcaacctacagctctgtgtacatcatcctaaaggatcaacgaca
caagacacaggagcctacgctgaggactgggtcaaatggcagagtctactctataacctg
tatgatgccctggtgagtgagatcagccagattgggagccgggggaaatatgccacaggg
tcgcgccacatcgctgtgaaggagaaccttatggagctaactgcagaaatctgccatcag
ctctttagcgaggattgtaacctccagattctggaggtgactcaggcccacctcagagcc
acccagagaggcagtccacacggcacgcccagcaagcgtagacgcatcgagctgggctgg
gaggttctccgagaccacctgcagccacaccatagtgactttgacatcataccatggtta
cagatcacatcagtgttgacctctaagtacccctccatggtgcctggccaggagctggtt
cctctgctgtccgtcctgtgccagctgctgggggagcagcggcggggtgacagggggccc
tacgtgctgcgctgcctgagggaggtggctcgctgccaggccacacacccagagagggcc
caatcctacagggttgaactgggcaggctgtggggccgtgtctgggccctggctctacgg
ggggtcagctccccccagactgaggccctcagtctggccctgctgtccaccatcctccag
ggagccttcattcccattgacagagagctctggaagctcttctctggctcggcctgcaag
ccctctgatgctgctgctctgtgtttggcccaggcccttctcaagtgtcctgttcttaag
agcctgggcactgggtgggaccatgcaggggctgtggagggggtcgggccacccagcctc
aaggagaacatcatgagctggctgctgatgaacgaacagagtgaagaggcagaggagagc
tcaagaccacaccccatcatctgcagggattttcctcataacctaatccccagaatcctt
gtgcctttgaccctcaaagacacccgagctggcattatgtttctccttggagcaaaggga
cttgagagtgctgtgatgcaagatcaaacacaagtggaagttaaaggtgccctgagtgag
attgagagcatgtacctgcagttcagctttgacgagatgccctctaaccccatggtgaaa
gagatggtgtcctcagccggcacccagctcactgttgtccccagcctaaaacacaagctg
gagcagggcctcttgtctgtggctgaccacctactcaactgctactccccagattctcag
accacaccaccagaatgcctggttcgttgttcaagtctccttactggcgttttagcagga
tatgtctctactggtctcctgactgaggaagaagcctgccattcccaactcttcctaaag
gccaaggcactggttcaggattttagtgagtacatatctaatgtgaaggtgaagatggca
gaggatgggacaatgaccacactcaggtctgtcatgcggctgtgcacacagtgtgtcaac
agaggggttaaggacagtatgagctctgtctcttgcaacttgttcatgaagattttccct
gcgagacttttgactgaactggcagaaatatgcaaactgttgctgaacagctcctgtaag
agaggcagtgtggggattgaggaggagaccacagatgaggactgggacatgacgaggaca
caggctgaccagcaggaggacattgacctgtttgatgatggagacgaaccacagaccagc
acatctaaggggactcacagacagaatgtggaccccaatgacacccagtgtggtcctgat
gctaaaagcctactggctgaggagcatttggcccagcaggatttagccatcttggccagt
ctggagttcctgtccctgtgtgtatcggctgagtttatccacgggctctctttcaaacca
gtggaggtccgccgcaagttactactgctgctggagcagatagactgcaccaagccacta
cacctcaacatgtacctggtccttctgaagaaactacctgctgaggacacatcgctggca
gctgaagagtttgactcactcctcagccctctggcggatctttgctcattgtaccgccag
gaccaggagatctgtgctgcagtgctgctgggtctgctaccgtctatccgtagtctgggc
cgtactcaggaccagcataatgacatgagacacgtccagggagctctgctccaagtggtc
tctggattctgcattttgggcagaacggggaaatgcacagcaattgtaaaggtggcatta
attcactgtctactggctctactggaggctgacccttgctgtaagtgggcggtccttacc
ctgagggaggaggagcttccagtgtccgtcatcctcccgtcccacctgtccgactctcac
catcacgtacgaatgcttgcagccatgacagtggaaaggctgttcttggagatgacacca
gacagcttggagaagagaaagatgcttcctctgaaatgccagcagacagcctttgagaac
atctacctgaaagcccaagaagggatgagggtccagaagaacagctctcctgaagacctg
agtgacgagacctttaaccgcaaggccacgctgctgaagagtgtgtcggtggtgctgtgc
tgcagccccgtctgtgagaaacagtccctcttcgccctcttccagtcctacaaggagaac
aacatagaggagccgctcatcaaaaaggtcctgggcagtgtgtccagagctctgggctac
aggagtgtggaggcatttgtcagctctcacctggattacctggtggcagagtggctgggc
cagcatggctacactctggagtccttcccatacactctgctcaaccacgccactctcaag
gacttctacagctcctcctatcaggtccttatcccacacctggtcttcctggatgacttt
aagcaggtgaagtccatcagcacccacctgggtaaggactggaagaagctgctggccaac
tgcttccctaagatcatggttaacatcctgccctactttgccgtgtcgggccaggatgcc
caagtggcccagcagagagagaaggcccacagggtctatgacctactcaaggacagcaac
tgcctgggcaaaccgcaaatcgacagcctgattcacagtaacctgtcagacattgtggtg
gagctgttgatgaccctgtatgaaggggctgctactgaggaggggggcagaggggacctg
agaaggttcataggggaactggacccagccccaaacccaccctatttcagctcctatgtc
ataaaagccacactggactatctcagctcgtgtcacagtgccaatctcaagtccctggtg
gccattttatccaagactccgatctccatccagaggatcttactggcggtgtgtcagaag
gcagctgagacgatcaatgcctacgagaggcaccgcatcctgctgatctactacctgttt
gtcagcctgctgctcaaggaggtcaaggacggcctggggggagcctgggccttcgtcctc
cgagacataatttacacactcatccaccacatcaacagcaggccggcccagttggacgag
gtgtccagccgtagtttctccctgtgttgtgacctactgacctctgtgtgtcgcacggcc
gtgcagttctgtgacgatgctgtggagagccacctccaggtcattgttggtactctcact
gcccaggtgacaaaccaacttgctatctcacagcaggtgctcagtctgttgaagttcctg
gtcgtagagagtcaggacaagctgaagagtgccatccagaagttagagcccttcccagac
cgacctgagttcagagagctgagggccgtgcagcacacactgaagtacagcacagggaaa
ttcactctcagacaggagatagcccacttcctgtctgtggcttcctgtgactccctgcct
ctgaccagactggaggggctgaaggacctgaggagacagctccacaacaacaagagccag
atcagaccgctgctgagagagtgcctcgcggaccctgaagagagtgtgttggtgctgctg
gtccttaacctactacagctctgtaagctagcagccaatcaccctggaggaagagacatc
ttagaggctgcagggagctgtctgggagagctggggcctgtggatttctccaccatcgct
ctactccatgggaaggaccagctcaatgccagagctgtatcactcttctctccagtggaa
ccacagtggctctacatcatcctgaactgcatcaacaacgccctcacacaccactgtatt
gaggtgaggcaagctgctgtccagagtctgaaggacatcttggccactcaggctggagct
gacttctgggagatccataaagacaaccgtgaccccatgctggcttacctcaaccctttt
agatctaccaagaagaaggtggtcgggatgagtgaggaggtgagcttggtggctagggag
cggttggagagccaggacctgtgggtgcctgaggctggcggccataaggcctggttgaag
acgctctgcatggttctgctggacagtggaggggtcaggagtgaggctctgctgctttcc
cggcccctgtgtctggtgaaaacagacttctgccagagggtgctgccgctcatcatccat
gacatcctgctgggggactctgacggctcctggaggaagctcctctccacacacatccag
gactttttcaccagctgttccagtcgtgcccgggcctccagccgctccaccactcctctc
ccctcagactctggagagtcggacatctccaaccagggtccgttggataaggcctctctg
cgcaccatgctctctgtcattaactatctgaggcagcaacaaagacctctagaatctgat
agtaacttgtgtggtacggtgtgccactctaacttctggttggagctgaactacctggag
gtggccagggcggcccagtcctgctcagcccacttcacagccctgctctactctgagatc
tacgtagacaagatcaagactaacatggaggagaaccgcagaaatccggccagagcgtcg
cgcagaatcacatttgatgagagcagtcagaacttccccatcttcagtctgacagaggag
agtgtgaaagacactggtatcagtctacaggacctactgattgaggtgtatcgtagtatt
ggggagccagacagtctgtatgggtgtggaggtgggaagatgaccagcgctctcaccagg
attcggacctatgagcatgaggcgatgtggggaaaggctctgacctcctacgacctccac
tccaatcttcctgatggcacacggcaagtgggcattgtggagggtctgcagaacattggt
ctgagcagtatcctggccacctacctgcggggtctggagagtgagggggtggagtggggg
gcggagctaagggagctcaggtttcaggccgcctggaggaacatgcagtgggactgtgac
ctatcagagaggaatgagaaattgaaccctggcttcaacgagtcagtgttctgctccctg
caggctttgagagacaaagagttttccacattcgatcaaactcttaaatatgccaggggc
aatgaggtggaggaactgtgcagaggcagtctggaggcagtgtcctctctctaccctgct
ctacggaacctccagaggatcagtgagctggagagcatccgacaactcttctccaagccc
ctgaccgacgtaggcctggccgaggtgtgttcccattggcagcagcactcccagctgctg
gcggacagtgactttacgctggtggagcccatcctggccctgcgctccgtggcccaggag
accctaatctcccaggagagagaccctgaaaagaacaagtacctcagcactgtcctcacc
tcccacctcatggagctctgccaactggcccgcgccgcaggaaacacacagctggcagag
cgggcagttttccagatgaagcagcatggcggaggaggggcgcggggctccacagcgtcg
tcatggcagctggaggaggcccaggtgttttgggcgaagagagagcagggtcttgctctg
gggctactgagacagatgatccacactctggaggagcaggttaactttaaccctgccctg
gtgccggtgttcacggagtgcctgaggctgtgtgggaactggctggcagagacgtgcctg
gagagccctggggtcatcctggagaagtacctggagagggcagtggaggtgatcgagggc
catgcgataggttcagacaccaagctgcagagccagaggacgcaggccttcctgtccctg
gccaggttctcagatgcccagtatcagggcattgataactacatgaagtcatctgagttt
gagaacaaacaggctctgctggagaaggccaaggaggaggtggacttgatgagggagcgc
aaggtcggcaccaacaggtacacagtgaaggtgcagagggagttggagctggatgagagg
gctctgtccaacctgcaggctgacagaaggaggttcctgtgtaaggctgtggagaactac
atccattgtctggagcagggtgaggagcacgacacctgggtgttccgcctggcctcactg
tggctggagaacgctgacgtcaagatagtcaacgacatgatgaagggaggtgtgaacagg
atcccgtcctataagtttctgcctctcatgtaccagctggctgcccgcatggggaccaaa
atgtctgctacagtggcagaggatgtgggcttccatggtgttctcaatgagctgatctgc
ctgtcgtgtctggagcaccctcaccacaccctcttcatcatcctggctctggtcaacgct
aacaaggacgagagcttctcccgcagccgcctgtccaagagcaccccgcgccattcctcc
caactggacctggagcggtctgaggtggcccagaggataatgaacaagatcaggaagaag
agagcccagatgatcagaggcatagaggtcctctgtgatgcctacatcactctggcctac
atggacgccagtcgacacaagacagagaaaaaagccatcctcatcccctctgaccagccc
atcatgcagataaagaacctagatgatgtcatcattcctacaatggagatcaaggtggac
ccctcgggtaaatatgacaacctggtgaccatcaagtccttcaagcctcactttcacctg
gccggaggggtcaacctgcccaagatcattgactgtgtgggatcagacgggaagagcaga
cgacaactggtcaagggccaggatgacctgcggcaggatgctgtgatgcagcaggtgttc
cacatgtgttctatgctgctgcagcgcaacactgagacacgcaagaggaaactcaacatc
cgacgctacaaggtggtgcccttctcccagcgtagtggggttctagaatggtgctcgggg
accgtccctataggggatttcctcatagacccacaaaagggcgctcacacacgcttctgc
ccccaagactggaccagcataacctgccggaaaaagatgatggagtctcagaggcttggt
tccggtgggaagacccaggctttcagtgaggtgtgtcagaacttccgccctgtcttccgg
tacttctgcatggagcgattcctggacccggcagtgtggctggaaaaacggctggcctac
actcgcagtgtggccacttcctccatcgtgggctacattgttggactgggggataggcac
attcagaacatccttatagacgaacagacagctgaactggtgcatattgatttgggtgta
gcgtttgaacagggcaagattctcccaactcctgagactgttcccttcaggctatccaga
gatattgtggatgggatgggcataacgggggtggagggcgttttcagaaggtga
DBGET
integrated database retrieval system
