Salvelinus namaycush (lake trout): 120028573
Help
Entry
120028573 CDS
T07522
Symbol
brca2
Name
(RefSeq) breast cancer type 2 susceptibility protein
KO
K08775
breast cancer 2 susceptibility protein
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03440
Homologous recombination
snh03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
120028573 (brca2)
03460 Fanconi anemia pathway
120028573 (brca2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
snh04121
]
120028573 (brca2)
03036 Chromosome and associated proteins [BR:
snh03036
]
120028573 (brca2)
03400 DNA repair and recombination proteins [BR:
snh03400
]
120028573 (brca2)
Ubiquitin system [BR:
snh04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
120028573 (brca2)
Chromosome and associated proteins [BR:
snh03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
120028573 (brca2)
DNA repair and recombination proteins [BR:
snh03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
120028573 (brca2)
FA (Fanconi anemia) pathway
Downstream FA components
120028573 (brca2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCA-2_helical
BRCA2
BRCA-2_OB3
BRCA-2_OB1
BRCA2DBD_OB2
Tower
BRCA2_TR2
Motif
Other DBs
NCBI-GeneID:
120028573
NCBI-ProteinID:
XP_038829696
UniProt:
A0A8U0TVT4
LinkDB
All DBs
Position
Sna34:complement(1892291..1915755)
Genome browser
AA seq
2623 aa
AA seq
DB search
MSWTSSLNTPVMSPTIILTKSEEHRTMCPVRIATEEQVMFVRKLFPSAMESGSTMLSPEQ
NDRPLCQHNGPDSHLPGVIDISPGFQDTLPGDSGSHWKQTLPDAIEDGEIRSTVAGVLDG
AEDVLSIFFSNRSLALQRVKTKERIKRKQSGATKEHVPTSTIEHDKVSSERAGEYQHTRE
TSEPLESRTDMKSGDLATSQWTPINVPDISGYDMDSFHHEGSSSTKHIIPQDGISETFRD
YTGSQQPDRGFSKQTVQVESALSRRTLPYTSQPEGSQLTGSVVESSLEHTFPRKTRTFVY
CVKNPLLSVQEKNVTQMLPASPGTAPRGENQNIKQSETIPNEAEFNHLNKTALDGKKPLV
EQKSATEENIVSQAPTKDPDLDMSQLCRVFAQDFSQVVDYSQPCSKRADAIKNGFSASAC
LLAMRLRNRKQLNKLEWGQKPEHLNSGISDEMHISGAQFSNSANTSRMNSTVCDSGFPPS
TLSDVTQTESSHVHPSSEKSYGNQSSRGFETGNNWIISLPPEAIKKAKASLDDLTEENMT
DVVTAASEVKAVLSCVTGSQLSTEVKFISPLNIAKRSKQTSVKLNGQVHVQTPRSVNVSV
SSHPGSGFKMASNKKIHFFSANLEKDKDLFKEIEDEMPAVNIPEISLPEEGNMSCGLELV
DGSHLPPLLYTHQRSVDSQGPLTASQRADVSELCSLLEAADSQFEFTQFKPAKLNFYVPD
GSTPRQSEKELGPDFLTGIDFDDSFNSDVEKQSVKMATPDKNTTISHCKEICQVTTTKIK
SSGGSSSNSTEKPKEHVIHRRVLYIPSYSSENIAERSFGLLTKTTNKNHLLDMDTNTSGM
ECESKNLPKLGVGFKTAGGNAMIVSEKCLSKARALFADFEEKNCAPKCAVKNPEQVETSP
VQYRGEVDRNVDSNVTHFHGPEKKVDLKEPRDEYIDKIKVDFTHSHKHGDGGFQTASGKG
VTISAKALQKANAVFKDCDAMEGSGCASEKLSKTSVVSETGSNNFERNNCGFSTARGKRV
DVSAKSLLKARTLLNDCDELENSKPGKIPSLNAKIPSQNIQQKSDCDFKKPSSKAASISA
KIPFTAKTPFDGGTSHDVLGAKSKMLEPENSHTHAKDPLKNGYGFSTASGKSVSVSEGAL
LKAQALLSECNVDGEELSKSKKKIRVDLHTIQNPTQKHSGFKTASVKEVTVSPKAHKQAK
AVFNNCDSNMDSLISAEAKQGNIDVKSADGLMNNPGKSYCAFMTAGGKNVHVSEKGILKA
RSILNENLDNCTDSNAIEEAWFSDGRFSLLTEDGTGVKKGAGNKSNSSDLNGDEKSCDFS
TAGGRTVHMSDGALQKAKSILNECDVIENPQPENGHKVHLEKIPKKETHEISHGSTASGK
GVFISEKALQEACDDTLASDTDPHRRSEANRPLKVPTPPHINVQRVPVKAVRLEDREVIQ
TIVGMACQSSSVECQAESSLLHFESLGFSGCSVTQRRYFAQEAMDCTKALLEDEDLTDHC
PGTPIQANPMSCKGGFEMRSGIRKRSAEDLGMTDQPPLKRRLLTKFDRTVDCSRRSQLTP
AKSSSDGIFKDRRVFKYNVALQPNVTRPYRANQRCVDTRLNKTEPQKTTSDPTAEDRKPV
SSKTAVFVPPFRKNVKLEPQRSSGLQDKTRAPGVFVSPFRKDNRVTREGSFKPSEDNHSP
FISEMPSKTTSVPLPEYNPITDTGSDNAKESIKEQDPQNIDKTDLGDDGGHCLPVTLGGE
DATAEESIADAECLQLARDMQDMRIKKKKRQTIRPLPGSLYLAKTSGVARLTLREAVGGR
HPVQHTHKQLYGYGVHRHVSDISSESAEAFRFVCRHFFRREAFVEGCIQLADGGWLIPRN
DGTAGKHEFHRALCDSPGVDPKLISEAWVFNNYRWVVWKRACMERAFPAVMGSLCLTPEQ
VLLQLKYRYDLEVDNSKRSALRKIMERDDTAVKTMVLCVCGVVTKGHNSTRQSWSETKTK
TPPGSAAGSKATSSPVGLIWLTDGWYAIKAQLDVPLTAMLHRGRLAIGGKVMVHGAELVG
SQDACSPLEAPDSLMLKIGANGTRAARWYTRLGFYSNPSPFLLPLSSLYSNGGPVGCVDI
VVLRSYPTQWMEKKSDGGFVFRAGRAEEREARRHGDAKHKAMEILFAKIQAQFEKEDVCG
KPRGRRRTLRGRDIETLLDGEELYDAVENDPVYLEGRLSEQQREALNSYRRCVGERRQAA
LQGRFRQALESTQEGEGGSCHNRDVTPIWKLSVADSRAKPGSNVYLLNIWRPSMDLQSLL
KEGCRYKAYKLSTSEGKKQAGNTSIQLTATKKTQFQNLQASAGWLSERFQAREAVGFRVL
LNRDFKPLCGEVDLVGYVISITDIQGHSPVVYLVDGWLDFVKVRCCSSLVQQGLEEVVKP
LALVALSNLQLRAHPSSPTPIRSAIPGLYAGELVSFSTNPKEPHLQEAATQLRTLVQGQE
HFFRTAEERLSNLVQGSVQCLPPPPWTPDAKPDARTTMTPQQSVRSVGPFTPLNRVVPPP
PACSSGGDNKDPKSLKRKRGLEYLCRVPSPPPLCPLGTMTLLSPSVNKTFNTPRRTETHR
ILKTPLAPAPQHVHLPQEDEWVEDEELVMIDTQALHDGIGIDT
NT seq
7872 nt
NT seq
+upstream
nt +downstream
nt
atgtcctggaccagttctctcaatacacctgtcatgtcgcccaccatcattttgactaaa
agtgaggagcataggactatgtgcccagtaagaattgctaccgaagagcaggttatgttt
gtgcgaaagcttttcccctcggccatggagtctggaagcacaatgctgtcaccagaacag
aatgatagacctctctgtcaacacaatggaccggattcccacttgcctggtgtgattgac
atctcccctggctttcaagacacgctacctggtgacagtggcagccattggaaacagact
ttaccagacgctattgaggacggagaaatccgcagcactgtggccggtgtcctagatgga
gctgaggatgtcctctccatattcttcagcaacagaagtttggctttacaaagggtgaag
accaaagagagaatcaaaaggaagcaaagtggcgcaactaaggaacacgtacctacttct
acaatagaacatgacaaagtatccagtgagagagcaggagaataccaacacactagggaa
acctctgagcctcttgagtccaggactgacatgaagtctggggatttggcgacttctcag
tggactccaataaatgtacctgacatttcaggctatgatatggattcatttcaccatgag
gggtcttcctctactaaacacataattccacaagatggcataagtgaaacattccgtgac
tacactgggagccagcagccggatcgcggtttctctaagcagactgtccaggtggagtct
gccctttccagaagaacattaccatacaccagccagccagagggatctcaattgacaggg
tctgtagtcgaaagctctctggaacacacctttcccaggaaaacaaggacatttgtttac
tgtgtcaaaaatccacttctgtcagtgcaagaaaaaaatgttactcagatgttacctgca
tcacctggaactgctcccagaggtgaaaatcagaacataaaacaaagtgaaaccatacca
aatgaagcggagtttaatcatcttaacaaaactgccttggatgggaaaaagccgctagtt
gagcagaaaagtgcaactgaagaaaatattgtttcacaagcaccgaccaaagaccctgat
cttgatatgtcacagctttgcagggtatttgcgcaagattttagccaagtagttgactac
agtcaaccatgcagcaaaagagcagatgctattaaaaatggcttctctgcgtcagcttgt
ctcttagcaatgagactaaggaacagaaaacagttgaataaactagaatggggccagaaa
cctgaacatcttaactctggcatcagtgatgaaatgcatatttctggtgctcagtttagc
aactctgcaaacacctctagaatgaatagtacagtgtgtgatagcggcttccccccctcc
accctttctgatgtcacacaaacagaatcatcccatgttcaccctagctctgaaaaaagt
tatggaaatcagtcatctagagggtttgaaacgggtaacaactggattatctctttgcct
ccagaagcaataaagaaagcaaaagcatcattggatgacttaactgaggaaaatatgact
gatgttgttactgctgccagtgaagtgaaagctgtgttgtcatgtgtgacaggaagccaa
ctgtccacagaagtgaagttcattagtccactcaacattgccaaaaggtcaaagcaaacc
agcgtaaaattgaatggtcaagttcatgttcagacccctcggagcgtcaatgtttcggtt
tcctcacaccctgggtctggtttcaaaatggcctccaataagaagatacattttttttca
gcaaatctggagaaagacaaggatctgtttaaggagattgaggatgaaatgcctgcagtc
aatattcctgagataagccttcctgaggaaggtaacatgtcatgtggattggagcttgtt
gatggatctcatttaccacctctactctatacacaccagaggtctgttgatagccaaggt
ccgttgacagcctcacagagagctgatgtttcagaattgtgcagtctcttagaagctgca
gacagccaatttgagttcacacagtttaaaccagcaaagctgaacttctatgtaccagat
ggtagcacccctcgtcaatctgagaaagaattgggtcccgactttctcactggcatagat
ttcgatgacagtttcaactctgatgttgagaagcaatctgtgaagatggccacccctgac
aaaaatacaactatttctcattgcaaggaaatttgccaagtaacaaccaccaaaattaaa
tctagtgggggatcatccagcaattcaacagagaaacccaaagaacatgttatccacaga
agagtactttacattcccagttatagctctgaaaacatagctgagcgttcctttggtttg
ttgacaaaaaccacaaacaagaaccatctactcgatatggatacgaacaccagtggaatg
gagtgtgaaagcaaaaatctccccaagttgggtgtgggttttaaaactgctggcggaaat
gctatgatagtttcagagaagtgtctgagcaaagcaagggccttgtttgcagattttgag
gaaaaaaactgtgcacccaagtgtgcagtaaaaaatccggaacaagttgaaacgtcacct
gttcaatatagaggcgaagttgatagaaatgttgattcaaatgtgacacattttcatggc
cctgaaaagaaagtagatctgaaggaaccacgtgatgaatacattgacaagattaaagtg
gactttacacattctcacaaacatggggatggtggattccagacagccagtggtaaagga
gtgaccatctcggcaaaggcccttcaaaaagcaaatgcagtcttcaaagactgtgacgct
atggaaggttcaggttgtgcatcagaaaagctgagcaaaacaagtgttgtatcagagact
ggcagtaataattttgagagaaacaattgtggcttcagcactgctcgagggaagagagtt
gatgtttctgcaaaatctctactgaaggcaaggactctcctgaatgactgtgatgaattg
gaaaattctaagccagggaaaatccccagcttgaatgcaaagataccaagtcagaatatt
cagcagaaaagtgactgtgattttaagaaacccagtagtaaagcagcctccatatcagca
aagatcccttttacagcaaaaactccatttgatggtggcacgtcacatgatgttctaggg
gcaaagagcaaaatgctcgaaccagaaaattctcatacccatgccaaagatcctttgaaa
aatggatatgggttcagcactgccagtggtaagagcgtgtctgtgtccgaaggggcgctg
ttgaaagcacaggctcttttgagtgaatgtaatgtagatggagaggaactttctaaatca
aagaaaaagatcagagtagatcttcatactattcagaatccaacacaaaagcacagtgga
tttaagactgcaagtgtcaaagaagttaccgtatcacctaaggctcataagcaagcaaag
gctgttttcaacaactgcgattccaatatggacagcttaatcagtgctgaagcaaagcaa
gggaatatagacgtaaagtcggcggatggtctgatgaacaatccagggaaaagctattgt
gccttcatgacagctggtggaaagaatgtgcatgtatctgaaaagggtattttgaaggcc
aggagcattctgaatgaaaaccttgataactgcacagactcaaatgccattgaggaggct
tggttttcagatggtagattttcgttactcactgaagatggtacaggtgtcaaaaaagga
gcagggaacaaatcaaattcttctgacctcaacggtgatgaaaagagctgtgatttcagc
actgccggtggcaggactgtgcatatgtccgatggagcactccagaaagcaaagtctatt
ctgaacgaatgtgatgtaattgaaaatccacaacctgagaatggccacaaagtgcatctg
gaaaagattccaaaaaaggaaacgcatgaaatctctcatggtagcacagccagtgggaaa
ggggtgtttatttcagagaaggcacttcaagaagcgtgtgatgatacccttgccagtgat
actgaccctcacagaagatctgaagcaaataggccactgaaggtccctactcccccccat
attaatgttcagcgtgtgccggtcaaagcagtccgactggaggaccgcgaagtgatccag
accattgttggaatggcatgtcagtcttcatctgtggaatgtcaagcggagtcttccttg
ttacattttgaatcccttggattcagtggctgctctgtgacccagaggaggtactttgcc
caggaggccatggattgtaccaaggctcttttagaggacgaagacttgaccgatcattgt
cctggaacaccaatccaagctaaccccatgtcctgcaaggggggttttgagatgagaagt
ggaattaggaaaaggtcagcagaggatttagggatgacagaccagcctcctctgaaaaga
agactcttgaccaaattcgacagaactgtggattgtagtagacggtctcaactcactcca
gctaaaagcagttcagatggtatatttaaagacaggagagtcttcaaatataatgtggct
cttcaacctaatgtcaccaggccatatcgcgctaatcagagatgtgtagacacaaggctg
aataagaccgagccacagaagacaacgtcagatccaaccgccgaagaccgtaaaccagtt
agctccaagacagctgtatttgtccccccattccggaagaatgtcaagcttgagccacag
aggagcagtggtcttcaggacaagactagagcacctggtgtgtttgtttccccgtttcga
aaagacaaccgcgtaaccagggagggttcctttaaaccttcagaagataatcattctccc
ttcatctctgaaatgccttccaagaccacatctgttccacttcctgagtacaaccccatc
actgacactggtagtgataacgcaaaggagtccattaaggaacaggacccacaaaatatt
gacaaaacggatctaggcgatgatggtggccattgccttcctgtcaccctaggaggagag
gatgccactgcagaggagtctattgcagatgcagagtgcttgcagctggcccgagacatg
caggacatgagaatcaagaagaagaagcggcagaccattagacctctccctggcagcctg
tacctggccaagacatctggggtggccaggctgaccctcagggaggctgttggaggtcgg
cacccggtacaacacacacacaaacagctgtatggctacggagtgcaccggcatgtttcg
gatatcagcagtgagagtgccgaggcgttccgctttgtctgccgacacttcttcagacgc
gaggcgtttgtagaggggtgcattcagctggccgacgggggttggctcatccctcgcaac
gatggaaccgcagggaaacatgagttccacagagcgttgtgtgatagccctggcgtggac
cccaagctgatcagtgaggcctgggtgttcaacaactaccgctgggtggtgtggaaacga
gcctgcatggagagggcattcccagcggtgatgggcagcctctgtctcacaccagaacag
gtgctcctacaactgaaatacaggtacgacttggaggtggacaacagcaagaggtcagct
ctaaggaagatcatggagagagacgacacggcagtcaagaccatggtgctttgtgtatgt
ggtgttgtcaccaaaggccataactcaacaaggcagagctggagtgagaccaagaccaaa
acaccacccgggagtgctgcagggtctaaagccacgtcgtccccagtaggcttgatctgg
ctgacggatggctggtacgccatcaaggcccagctggacgtcccactgaccgccatgctc
caccggggccgcctggcgattggggggaaggtgatggtccacggggctgagctggtggga
tctcaggatgcctgctccccactagaggctcccgactccctcatgctgaagattggggcc
aacggcaccagagcggcgcgttggtacaccaggctagggttctacagcaaccctagtccg
ttcctcctccccctctcctccctctacagcaacggaggccccgtgggctgtgtggacatt
gtggtgctgaggagctaccctacccagtggatggagaagaagtcggacggagggtttgtg
ttccgcgcaggccgtgcagaggagagggaggcgcggcgtcacggagacgccaaacacaaa
gccatggagatcctgttcgccaagatccaggcccagtttgagaaggaggacgtttgcggt
aaacccagaggccggagacggaccctgcgtggtcgagacattgagacactgctggacggg
gaggagctgtacgacgcggtggagaatgacccagtttatctggagggccgtctgagtgag
cagcaacgggaggcgttgaacagctataggcgttgtgtcggtgagaggaggcaagcggca
ctgcaggggaggttccgccaggctctggaaagcacccaggagggcgagggcgggagctgt
cacaaccgagacgtgacccccatctggaagctcagcgtcgctgactccagggccaagccg
ggcagcaatgtgtacctgttgaatatctggcgcccctccatggatctgcagtccttgctg
aaggagggctgtcgatacaaggcctacaaactatccacgtcggagggcaagaaacaagcc
ggtaacacctccattcagctcaccgccaccaagaaaacccagttccagaatttacaggct
tctgcagggtggttgtctgagcgtttccaagcccgagaggcggttggctttcgcgttctc
ctgaaccgggactttaagccgctctgtggagaggtggatctggtaggctacgtcatctcc
atcacagacatacaaggtcactctccagtggtgtatctagtggatggctggctggacttt
gtcaaggtgcgctgctgcagcagtctggtccagcagggcttggaggaggtggtcaagcct
ctggctctggtggctctcagtaaccttcagctcagagcccatccctcctcccccacccct
atccgcagcgccatccctggcctatacgctggagaactggtctcgttttccaccaacccc
aaggagccacatctacaggaggctgccactcaactcagaacccttgtccagggccaggaa
cacttcttcaggactgcagaggagaggttatctaacttagtccaggggtctgtccagtgt
cttcctccgccgccatggactccagatgccaaaccagatgccaggactactatgacaccc
cagcagtcagttcgaagcgttggccccttcacccccctgaacagggtcgtcccccctcca
cccgcctgctcctccgggggggacaacaaagaccccaagagcctgaaaagaaagaggggc
ctggagtacctgtgtcgtgtcccctctccccctccactctgccccttgggcaccatgacc
ttactctcgccgtccgtcaacaagaccttcaacacccctcgcaggaccgagacccaccgg
atcctaaagacacctctggcccccgctccacagcatgtccacctgccccaagaggatgag
tgggtggaggatgaagagctggtcatgattgacactcaggccctacacgatggcataggg
atagacacgtga
DBGET
integrated database retrieval system
