Salvelinus namaycush (lake trout): 120028608
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Entry
120028608 CDS
T07522
Symbol
sars2
Name
(RefSeq) serine--tRNA ligase, mitochondrial isoform X1
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
120028608 (sars2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
snh01007
]
120028608 (sars2)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
snh03016
]
120028608 (sars2)
Enzymes [BR:
snh01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
120028608 (sars2)
Amino acid related enzymes [BR:
snh01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
120028608 (sars2)
Transfer RNA biogenesis [BR:
snh03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
120028608 (sars2)
Prokaryotic type
120028608 (sars2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
Syntaxin
DUF4349
Motif
Other DBs
NCBI-GeneID:
120028608
NCBI-ProteinID:
XP_038829748
UniProt:
A0A8U0PS19
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All DBs
Position
34:11936001..11941524
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AA seq
519 aa
AA seq
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MATCIGIAVRLGTLNVLKPVSRHFTRQGTNVFTPSRSTHEVRSSLYEHVRDGYSDKPDLD
MRLVCEETDKVIANVETRKGDLRGADVREIVCVWQQLEAVRKEISQLEKQKKVISHRVRA
LVDQNDKKALSNIPEFKEATKEGREIRHRLSQLYPRESELEEEHYGRALRLPNTTHPDVP
IGDESQARVVELVGQKPEFDFKPRRHLEIGEELGLIRQRRLAHVSGHRSYYLRGAGARLQ
SALQNFALETLQQRGFIPMVVPDMLKGAVFEGCGMQPHAHRSQVYSLDPACFPDLNLAGT
GEVGIAGYFMDHAVNWKDLPVRSVCSSTCYRAETDTGRETWGLYRVHHFNKVEMFGVTAD
ETGEESSQMLEEFLSLQKEIFSSLELHYRVLDMPTQELGRPAHRKYDIEAWMPGRDSYGE
ISSGSNCTDYQSRRLNILYEGEDGSLHYAHTVNATACAIPRTIIAILETHQTKEGTVLVP
RALQPFLGLEVIEKPKYIPLKYIGPNQPNRMPRPVPKPR
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atggcgacttgcattggcattgctgttcggcttggcacattgaatgtcttaaaacctgtt
tcaagacactttacaaggcaggggacaaacgtatttacccccagccgctccacacatgag
gtgcgaagtagtctgtacgaacatgtccgcgatggctacagtgacaagccagacttggac
atgcgacttgtgtgcgaggagactgacaaagtcattgccaatgtggagactcggaaaggg
gacctacggggagcagatgtcagggagatcgtgtgtgtttggcagcaacttgaggcagtg
cgaaaggaaatctcacagctggagaagcagaagaaagtgatcagtcatagagttcgggct
cttgtggaccagaatgacaagaaagccctatctaatattcctgagttcaaggaggctacg
aaggagggtcgggagatccgtcatcggctgagccagctttacccccgagagagtgagctg
gaggaggagcactatggccgagccctgaggctgcccaacaccacacaccccgatgtgcca
attggagatgagagccaagcgagagtggtggagctggttggacagaagccagagtttgac
ttcaaacccaggagacacctagagatcggggaggagcttggtcttatcagacagaggcgt
cttgcccatgtctcaggtcataggtcatactatctaaggggagcgggggccagactccag
tctgctctacagaacttcgccctggaaacactgcagcagcgggggtttatacctatggtt
gtgccagacatgctgaagggggctgtatttgagggttgtggaatgcagccccatgcccac
aggtctcaggtgtactctctggaccccgcctgcttccctgacctcaacctggctggcaca
ggggaggtgggcatagcaggttattttatggaccatgctgttaactggaaggaccttcct
gtcaggtctgtgtgcagtagcacatgttacagggctgagacggacacaggcagagagact
tggggcctttacagagtacatcacttcaacaaggtggagatgtttggtgtgactgcagat
gagactggggaggagagctctcagatgctggaggagttcctgtccctgcagaaggagatc
ttctcctccctggagctccactatagagtactggacatgcccacccaggagctaggtcgc
ccagcacacaggaagtacgacattgaggcctggatgccagggagggacagctatggcgag
atctccagtgggtctaactgtacagactaccaaagcagacgcctcaatatcctatatgag
ggggaggatggtagcctacactatgctcatacggtgaatgccacagcgtgtgctattccc
cgtactatcattgctatactggagactcatcagaccaaggaagggacagtgttagtgcct
cgtgccttgcagcccttcctggggttggaggtgattgaaaagcccaaatacattcctttg
aaatacatcggaccaaaccagcccaatcgcatgccccgccctgtcccaaagcccagatga
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