Salvelinus namaycush (lake trout): 120028638
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Entry
120028638 CDS
T07522
Name
(RefSeq) phenylalanine--tRNA ligase beta subunit-like
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
120028638
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
snh01007
]
120028638
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
snh03016
]
120028638
Enzymes [BR:
snh01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
120028638
Amino acid related enzymes [BR:
snh01007
]
Aminoacyl-tRNA synthetase
Class II (U)
120028638
Transfer RNA biogenesis [BR:
snh03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
120028638
Prokaryotic type
120028638
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GFIT
Motif
Pfam:
tRNA_synthFbeta
PhetRS_B1
B5
B3_4
EAD7
DUF383
Motif
Other DBs
NCBI-GeneID:
120028638
NCBI-ProteinID:
XP_038829780
UniProt:
A0A8U0PRZ6
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Position
Sna34:30438799..30449448
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AA seq
589 aa
AA seq
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MPTVSVKRDLLFHALGRTYTDEEFDELCFEFGLELDEITSEKDIISREQGDTKAEGASDV
ILYKIDVPANRYDLLCLEGLVRGLQVFKQKMEAPRYRRVSPASSEPQRLVITEETTVVRP
HAVAAVLRNITFTQERYDSFIELQEKLHQNVCRKRTLVAIGTHDLDTISGPFTYTAKPPG
DIRFKPLNQAKEYTAQELMILYKTDSHLRHYLHIIEDEAVYPVIYDSNGIVLSMPPIING
DHSKISLNTKNVFIECTATDLTKAKIVLDMMVTMFCEYCEEPFTVEEAEVVYPDGRTCQY
PELAYRKETLSADFINRKVGISESTEHIAQLLTKMCLRSEVMSDGEQIEVEIPPTRSDVI
HACDIMEDAAMAYGFNNIPRTTPRTYTVANQLPLNKLSELLRQDLAAAGFTEALTFALCS
QEDIADKLLKNISETRACHISNPKTAEFQVARTTLLSGLLKTVAANRKMPLPLRLFEISD
VVLKDETKDVGARNNRRLCAVYYNKSPGFEVIHGLMDRVMQLLEVKPGQGNGYHIQAADD
STFFPGRCAEIFARGKSIGRLGVLHPDVINRFELTMPCSALDIDIEPFL
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgccgactgtcagtgtcaaaagggatcttctgtttcatgcattgggcagaacatacact
gatgaagaatttgatgagttgtgttttgagtttgggctggagctcgatgagattacctca
gagaaggacatcatcagtcgtgagcagggggacaccaaggcagagggggcgtctgatgtg
attctgtataagatcgatgtcccagctaaccgctatgaccttctgtgtctggaagggctg
gtcaggggcctgcaggtcttcaagcagaagatggaagcccctcgctacaggcgtgtgagt
ccagccagcagtgagcctcagaggctggtcatcacagaggagacaactgttgtgcgaccc
cacgctgtggctgcagtcctgaggaacatcaccttcacacaggaacgctacgacagcttt
atcgaactacaggaaaaactccatcagaacgtctgtaggaaaaggactctggttgccatc
ggcacccatgacctggacaccatttcaggccccttcacctacacagccaaaccacctggt
gacatccgcttcaaacctctcaaccaggcaaaggagtacaccgcacaggaactcatgatt
ctctacaagacagacagccacttgcgacactatctacacatcattgaagacgaggctgta
tatcctgtcatctatgacagcaacggcattgtactgtctatgcctccaatcatcaatggg
gaccattccaaaatctccttgaatacaaagaatgtttttatcgagtgcacagccactgat
cttaccaaggcaaaaattgtgttggacatgatggtgacgatgttctgcgagtattgtgaa
gagcctttcacggtagaggaggctgaggtggtgtacccagacggaaggacctgtcagtac
ccggagctggcttacaggaaggaaactctgtcggccgacttcatcaaccgcaaagttggc
atcagtgagtcgactgagcatatcgctcaactgttgaccaagatgtgcttgcgctcagag
gtcatgagtgacggcgaacagatcgaggtggagatcccgcccacgcgctctgacgtcatc
cacgcctgtgacatcatggaggacgccgccatggcatacggtttcaacaatattccccgc
accacgccgcgcacatataccgtagccaatcagctcccacttaataagctgtcagagcta
ctgagacaggacctggctgctgctggattcacggaggccctcaccttcgccctgtgttct
caggaggacatagctgacaagctgttgaagaacatctcagagaccagagcatgtcacatc
tccaaccccaagacagctgagttccaggtggcgcgcaccaccctgctctcaggcctgctg
aagactgttgctgccaacaggaagatgcctctgcctctgaggctgtttgagatttcagac
gtggtgctcaaggatgaaaccaaagacgtgggggccaggaacaaccgtcgcctttgtgct
gtctactacaacaagagtccggggtttgaggtgatccacggtctgatggacagggtcatg
cagctgctggaggtcaaaccaggccagggcaatggctaccacatccaggctgctgacgat
tccaccttcttccctggtcgctgtgctgagatctttgcgcgcgggaagagcataggacgc
ctcggggtccttcaccctgatgtcatcaaccgctttgagctcaccatgccatgctccgcc
ctggacatcgacatcgagcccttcctgtga
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