Salvelinus namaycush (lake trout): 120028713
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Entry
120028713 CDS
T07522
Name
(RefSeq) vacuolar protein sorting-associated protein 26B-like
KO
K18466
vacuolar protein sorting-associated protein 26A/B
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120028713
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120028713
Membrane trafficking [BR:
snh04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
120028713
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps26
Arrestin_N
Motif
Other DBs
NCBI-GeneID:
120028713
NCBI-ProteinID:
XP_038829865
UniProt:
A0A8U0TVW0
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Position
Sna34:23554489..23558059
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AA seq
333 aa
AA seq
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MSFFSFGQSAEIDVVLTDAETRKKAEHKTEDGKKDKYFLFYDGETVAGKVNVTLKNPGKR
LEHQGIKIEFVGQIELYYDRGNHHEFVSLVKDLARPGELTQSQTFDFEFTHVEKPYESYT
GQNVKLRYFLRATVSRRLNDISKEMDIVVHTLSTYPELNSSIKMEVGIEDCLHIEFEYNK
SKYHLKDVIVGKIYFLLVRIKIKHMEIDIIKRETTGTGPSVYHENDTIAKYEIMDGAPVR
GESIPIRLFLAGYEMTPTMRDINKKFSVRYYLNLVLIDEEERRYFKQQEITLWRKGDVVR
KSMSSQATIGAQRFEGSVSSESALEKAAREDSA
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgagtttcttcagttttggccaaagtgcagaaattgatgtagttctgactgatgctgag
acgagaaaaaaggctgaacataagactgaagatgggaagaaggacaaatatttcttattt
tatgatggggagactgtggcaggaaaggtcaacgttacactgaagaaccctgggaaaaga
ctggaacatcaaggcatcaaaatcgaatttgtaggccagattgagctgtactacgacaga
ggaaaccatcatgagtttgtctccctggtgaaagatctggcaaggcctggtgagcttact
cagtcacagaccttcgactttgagttcacccatgttgagaagccctatgagtcatacaca
ggccagaatgtgaagctacggtattttctgcgcgctacggtgagcaggagactgaatgac
atcagtaaagagatggatattgtggtgcacacactcagcacttacccagagctcaactcg
tcaataaaaatggaagttgggatcgaagactgtctccacattgagtttgagtacaacaaa
tccaagtaccacctgaaagacgtcattgtgggtaagatctacttcctgctggtgcggatt
aaaatcaagcacatggagattgacataatcaaaagggagacaactggcaccggtcctagt
gtataccatgaaaatgacaccatcgccaaatatgagatcatggatggagctcctgtccga
ggagagtcaattccaatccggttgtttctggctggctatgagatgacccctaccatgcga
gatatcaataagaagttctctgtgcgttactaccttaatctggtgctgattgatgaggag
gagagacgctacttcaaacagcaggaaatcacactgtggaggaaaggggatgtggtgagg
aagagcatgtcgagccaggccaccatcggagcccagcggttcgagggctcagtcagctca
gagagtgctctggagaaggcggctagggaagacagcgcctaa
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