Salvelinus namaycush (lake trout): 120028790
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Entry
120028790 CDS
T07522
Name
(RefSeq) extracellular calcium-sensing receptor-like
KO
K04613
vomeronasal 2 receptor
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
snh04030
]
120028790
G protein-coupled receptors [BR:
snh04030
]
Others
Chemoreception
Vomeronasal pheromone
120028790
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Gene cluster
GFIT
Motif
Pfam:
7tm_3
ANF_receptor
NCD3G
Peripla_BP_6
Ephrin_rec_like
Motif
Other DBs
NCBI-GeneID:
120028790
NCBI-ProteinID:
XP_038829959
UniProt:
A0A8U0TUS3
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Position
Sna34:38327555..38335745
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AA seq
845 aa
AA seq
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MSSWFSWLTPAIPLLLPWLVKHGVGMAQATVCSRWDHSVGLDDIGLSQEGDVVIGAVFPI
HILPPAPDLSFSQHPDLQSCVNFQEEPLRWVHALVFAVDEINRNPFLLPGVRLGYRVLDS
CGQHPWSLRGALSLVSGGNLRSWPSSDFHVPLVIGDASSTQAIILARTLGPLSVPVISYQ
ASCGCLSDRQEFPNFFRTIPSDVYQALTMARLTWLLGWTWVGAIAADNDYGRQAIQVFEA
AVRGTGVCLAFFETLNRANLVRDVVRAADTVQASTARVILVFLWYTDMGALLLELGRRNV
TDRQFLASEAWSTSGQLLRNPALFNVSRGVVGVAIRSAPMPGFEAHLRSLHPSRRPRDVL
LKELWETEFNGAETLEVVQSPFTDTSQLRITYNVYLAVYAAAHALHSLLSCPQRDSPTWG
NSFTCSPPHNISPAELLQHLNQVNFTTPLGEPFYFRGADVPAVYDLVNWQATPQGLLKLV
TIGRVEGSNILIDQSAIQWNAGSNMVPVSVCSDSCPPGTRVARKKGEPVCCFDCIPCAEG
EVSNTTGSLQCDRCPLEFWSNSNRTACIPRQLEFLSFSDTMGVTLTTVAVCGTVATAAVF
MLFVYHRHTPLVRANNSELSFLLLLSLKLCFLCSLVFIGRPSAWACRIRQAAFGVIFVLC
LSCLLVKTIVVLAAFRSARPGAGQLMRWFGPVQQRGSVFLFTSVQVIICAVWLSISPPLP
YRDLGLKGSKVILECEMGSVAGFSLVLGYIGLLASLCLLLAFLARKLPDNFNEAKFITFS
MLIFCAVWISFVPAYVSSPGKYADAVEIFAILASSFGLLFCLFAPKCFIILLRPERNTKK
HMMDK
NT seq
2538 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcctggttcagctggctgacaccggccattcccctgctactgccctggctggtc
aagcatggggtagggatggctcaggcaaccgtgtgttcacggtgggaccattcagtcggt
ctggatgacattggtctatcccaggaaggtgatgtggtgatcggggctgtcttccctatc
catatcctcccccctgctccagacctgagcttcagccaacaccctgacctgcagtcctgt
gtcaatttccaggaggaaccgttgagatgggtgcacgcactggtgttcgcagtggacgag
attaaccgtaaccccttcctgctgccaggagtccggctgggctaccgtgtcctggacagc
tgtggtcagcacccctggagcctgcgaggggcactgtccctggtgtcaggggggaacctc
agatcgtggccatcaagtgacttccatgttcctctggtcattggtgatgcatcgtccact
caggccatcatcctggccaggaccctggggcccctctctgtgcctgtgatcagttaccag
gccagctgtggctgtctcagtgacagacaggagttccctaacttcttcaggaccatcccc
agtgatgtctaccaagccctcactatggcccggctcacctggctcttgggatggacctgg
gtcggggctatcgctgcagacaatgactacggtcgtcaggccatacaggtgtttgaggcg
gcggttcggggaacgggggtgtgcctggcgttctttgagaccctcaaccgggcgaacctg
gtgagggatgtggtgcgagcagcagacacggtccaggcctcgacagcacgggtgatccta
gtcttcctctggtacactgacatgggggcgttactcctggagctggggaggagaaacgtg
acggacaggcagtttctggccagtgaggcatggagcaccagtggacaactgctacggaac
cccgccctctttaatgtctctcggggcgttgtgggtgtggcaatccgtagtgcacctatg
cctggctttgaggcccaccttcgaagtctccacccgtctaggcgtcccagagacgtgctg
ttgaaggaactctgggaaacggagtttaatggggcagagactctggaggtggtgcagagc
cccttcacagatacctctcagctgagaataacctataacgtgtacctggctgtgtatgct
gcggcccacgctctccacagcctgctgtcctgcccccagagagacagccctacctggggc
aacagcttcacctgctcccctcctcacaacatcagcccagcagagctgttgcagcacctg
aaccaggttaacttcaccactccacttggggagccgttttatttccggggcgcggacgtc
cctgctgtctacgaccttgtgaactggcaggccacgccccaggggttgctcaaacttgtc
acgattggccgagtagaggggtccaatatcctcatcgaccaatcagccatccagtggaac
gcaggatctaatatggtacctgtgtcagtgtgcagtgacagctgtcccccaggcacccgt
gtagccaggaagaagggggagcctgtctgctgcttcgactgtatcccctgtgctgaggga
gaggtcagcaacaccacaggctctctacaatgtgaccgctgtcctctggagttctggtcc
aacagcaatcggaccgcctgcatccctcgtcagctcgagttcctctccttcagcgacact
atgggcgtcactctgaccactgttgccgtgtgcggcaccgtggcaacagcggctgtgttt
atgctctttgtgtaccaccgccacacccctctggtgcgggccaacaactcagagctgagt
ttcttgcttctcctgtcactcaagctctgcttcctgtgttcgttggtgttcattgggcgt
ccctcagcgtgggcgtgtcggatccgccaggcggcgtttggggtcatcttcgtgctctgt
ctctcctgcctccttgtcaagaccatcgtggttctggctgcgttccgctcagccaggccc
ggtgctgggcagttgatgaggtggtttggacccgttcagcagagagggagtgtcttcctc
tttactagtgttcaggtgatcatctgtgccgtgtggctgtcgataagtcctcccctgcct
taccgtgacctaggcctcaaggggtctaaggtcatcctggaatgtgagatgggctctgtg
gccggcttctctctggtgctgggctacataggcctactggcctccctctgtctcctccta
gctttcctggccaggaaactcccagacaacttcaacgaggccaagttcatcaccttcagc
atgctgatcttctgtgccgtatggatctccttcgtccctgcctacgtcagctctcctggg
aagtacgctgacgctgtggagatattcgccatcttagcttccagctttgggctgctgttc
tgtctgtttgctccaaagtgtttcatcatcctcctgagaccagagagaaacaccaagaaa
cacatgatggacaaatag
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