Salvelinus namaycush (lake trout): 120028812
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Entry
120028812 CDS
T07522
Name
(RefSeq) sodium-dependent serotonin transporter-like
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
120028812
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
snh02000
]
120028812
Transporters [BR:
snh02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
120028812
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Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
120028812
NCBI-ProteinID:
XP_038829981
UniProt:
A0A8U0TW27
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Position
Sna34:9959226..9975266
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AA seq
644 aa
AA seq
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MEMKQSMMVDRENEGGEKEKGEESSQENGRLMLADGGVAEKGGPKVNSGGGSGGVSNGYP
TSTAPSPKEGAGGVPAGALRTLVVQQTSLDQPRETWSKKMDFLLSVIGYAVDLGNVWRFP
YICYQNGGGAFLLPYMLMAVFGGVPLFYMELALGQFHRSGCISIWKHICPIFKGIGFAIC
IIALYIAFYYNTIMAWALYYLLASFRPTLPWTTCSNPWNTVNCLRYLSTDSNVTWTNTST
SPAEEFYTRQVLQVHMSPGLHQLGSVSWQLALCLLFIFTIVYFSIWKGVKTSGKVVWVTA
TFPYLVLLVLLVRGATLPGAWRGVVFYLKPDWGKLLSTTVWIDAAAQIFFSLGPGFGVLL
AFASYNPFHNNCYKDALLTSSVNCLTSFLSGFVIFTVLGYMAEMRKIGVETVAKDAGPSL
LFIIYAEAIANMPAATFFAIIFFLMIIMLGLDSTFAGLEGVITAMLDEFPQLLSRRREWF
VLGLVCVCYLGALSTLTYGGAFVVKLFEEYATGPAVITVVFLEVIAVSWFYGTSRFCADV
HMMLGFSPGLFWRVCWVAICPIFLLFIIVSFLAFPPEVKLFDYVYPPWTTVLGYCIGVSS
FICVPAYMVYHLLTAKGTFKQRLLKGITPVPSGPHSDIIITHAV
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atggagatgaaacagtcaatgatggtggacagagagaacgaaggaggagagaaagagaaa
ggggaggagtcatcgcaggagaacggcagactcatgctggctgacggaggggtggcagag
aaggggggccccaaagtgaactctggtggggggtcaggaggggtgtccaacgggtacccc
acgtccacagcaccgagccccaaggagggagcggggggtgtacccgcaggggccctcagg
actctggtggtccagcagaccagtctggaccagccccgggagacctggagcaagaagatg
gactttctgttgtctgtgattggctacgccgtggacctgggaaatgtgtggcgcttcccc
tacatctgctaccaaaacggaggaggtgccttcctgctgccctacatgttgatggcggta
ttcggcggcgtgcctctgttctacatggagctggcactggggcagttccaccgcagtggc
tgcatctccatctggaaacacatctgccccatcttcaagggtatcggcttcgccatctgc
atcatagcgctgtacattgcgttctactacaacaccatcatggcgtgggccctgtactac
ctgctggcgtcgttccggcccaccctcccctggaccacgtgctccaacccctggaacacg
gtcaactgtctccgctacctgtccaccgacagcaacgtcacctggaccaacacgtccacc
tcgcccgccgaggagttctatacgcgtcaggtactgcaggtgcacatgtctccaggtctg
caccagcttggcagtgtgagttggcagctggctctctgcctcctgttcatcttcaccatc
gtctacttcagcatctggaagggagtcaagacctctggcaaggtggtgtgggtgacagcc
accttcccctaccttgtcctgctggtgctgctcgttcgtggggccactctgcccggggcc
tggaggggcgtggtcttctacctcaaacctgattgggggaaactactcagcaccacagta
tggattgatgcagcagctcagatcttcttctctctggggccaggtttcggggttctcctg
gcctttgccagctacaacccctttcacaacaactgttacaaggatgcattgctgaccagc
tctgtgaactgcctgaccagtttcctctctgggtttgtcatctttaccgtgctcggctac
atggctgagatgcgcaaaataggtgtggagaccgtagccaaggatgctggtcccagtctg
ctgttcatcatctatgctgaagccatcgccaacatgcccgctgccaccttcttcgccatt
atcttcttcctcatgatcatcatgctggggctggacagcacgtttgccggtctggagggg
gtgatcacagccatgctggatgagttcccccagttgttgtctaggaggagggagtggttt
gtcctgggcctggtgtgtgtctgctacctgggagcgctctccaccctcacctacggaggt
gcgtttgtggtgaaactgtttgaggagtacgccacgggacctgctgtcatcactgtcgtc
ttcctagaagtcatcgccgtttcctggttctacggcacaagtcgtttctgtgctgatgtc
catatgatgctgggcttctcgcctggattgttctggagggtgtgctgggtggccatctgc
ccaatcttcctactgttcatcattgtcagtttcctggcattccccccggaggtcaagttg
tttgactacgtctacccaccttggacaactgttctgggctactgcatcggagtgtcctcc
ttcatctgtgtaccagcctacatggtgtaccacctgctcactgccaaagggacctttaaa
cagcgtctcctgaagggcatcacccctgtacccagtgggcctcacagtgacattatcatc
acccacgctgtctga
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