Salvelinus namaycush (lake trout): 120028819
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Entry
120028819 CDS
T07522
Name
(RefSeq) eukaryotic translation initiation factor 4 gamma 1-like isoform X1
KO
K03260
translation initiation factor 4G
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
snh03019
]
120028819
03012 Translation factors [BR:
snh03012
]
120028819
Messenger RNA biogenesis [BR:
snh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
120028819
mRNA cycle factors
Stress granule specific factors
120028819
Translation factors [BR:
snh03012
]
Eukaryotic type
Initiation factors
eIF-4
120028819
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
MA3
W2
Motif
Other DBs
NCBI-GeneID:
120028819
NCBI-ProteinID:
XP_038829987
UniProt:
A0A8U0PTB5
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Position
Sna34:complement(30142616..30207892)
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AA seq
1684 aa
AA seq
DB search
MNKAPQSLTRPHPAPSPGLQLPTFPPGQRPSVVFATPPPQMNPAPQPQQAYYSRPSLPSN
ASRVPPGNTPRPVAPTHVYQPGQQMMMIPSQQIPFPNQQGPAYFIPGQYRSTYVATPQQY
PVPPGTPGFYPGTSPAEYGTYAGAYYPAQQQYTPSVPAAPVIMNPPPQQQQLPPQQQIQP
KRERKQVQIIIRDPNQGGKDITEEIMSGGTRSGTTPTPPQMSDDSSESSGSEGPAVAQAN
GENVTPVVVRPDDRGKPAATLITGPPALSKTSELVKTAPAPTEVKLPDTDCKSPSLPQDL
PTPPRVTTTLHTTAPGTPPPSTSPIADMMDAPAPAAAPALSAPKVPAYPAPLPEPRPTPA
AEEQPSAAKETWEEVKKKKEEIKEVTEARAVTTSSKPEPSLAPVTNPSSSTNGVSATQPL
PEEEPAALSITMPSPQAAKPPLESPIAQPEELRLPNGLPLPSPQDPEKVSAESSECDLSP
IAEPEVTPLQREAPASVAAMVTRDPVVQATVAPVVLAETASTTEVTPHQMEDEMDSPPSQ
RTTPPGANSMQAAVSVPKKKRKMKHLNRKEAVGDLLDAFKEEQVVQSPPEQATPTSASDT
EEPRPAATPAVAEVDETWEEKEDKLDAENIEPKPGDLKYQYKEELCRPIDPEEKKRYDRD
FLLGFQFISAAMSKPEGLPQISDVVLDKANKAPLRQLDPSRLPGMNMGTDFTPSFANLGR
PGMGGGGGHRGGPPSGMGGGGPRRSQQGQRKEPRRIINISSSLTDDVKLNKAEDAWKPAV
KKAASGQAAPEEESDDPEQAKTQELFKRVRSILNKLTPQMFQQLMKQVKELTIDTEERLK
GVIDLIFEKAISEPNFSVAYANMCRCLMGLKVPTTDKPEVTVNFRKLLLNRCQKEFEKDK
DDDVIFEKKQKELDAAAVEEKDRLKAELEEAKNMARRRSLGNIKFIGELFKLKMLTEAIM
HDCIVKLLKNHDEESLECLCRLLSTIGKDLDFEKAKPRMDQYFVQMDKIIKEKKTSSRIR
FMLQDVLDLRRNTWVPRRGEQGPKTIDQIHKEAELEEHREVLKVQQQLLNQNTRGGGGGR
GGGGGGGRDQGNRGGQHPQAGQRSQPQDEGWNTVPISTKSRPIDTSRLSKITKPGALDFN
NQLLAPQLGGKGMWGSWGKGSSGGTTGAKPAGEATPESGGRPATSTLNRFSALQPQQPSS
GPSQDSDRRVPLRSAPLSRNSSSRDRGSDRFERHDRGSNDRFDRRDDRDRNRHPVTKRSF
SRETEEHSREREHRGPSDPIRRVASMTDDRGSRDRARSKENVKREAAATPPTQTKPSLTE
EELEKKATAIIEEYLHINDMKEALQCVVEMNSTQLLFVFVRSGLESTLERSPIARERTGL
LLHQLYKAGTLPTEQYYRGLQEILEVAEDMAIDIPHIWLYLAELITPMLHEGGIPMGPLF
KEISKPLVPQGTAGVLLVQILTLLCRGMSRKKAGTMWREAGLSWKDFLPEDEDVNKFVTE
KNVEFTLGGEGDETEKSSKKELSSEELNKQLDRLIQDRADNQRIYDWVEANLDETQISSN
VFVRAVMTAICQSAILCENPYKLDAKVITRRAKLLHKYLKDEQKELQALYALQALMVEME
QPANLLRMFFDTLYDEDVIKEDAFYKWESSKDPAEMQGKGVALKSVTAFFTWLREAEDEE
SDNS
NT seq
5055 nt
NT seq
+upstream
nt +downstream
nt
atgaataaagcaccacagtctttaacgcgaccccaccctgccccctcccccggactccag
ctacccaccttccctcctggacagcgcccctctgttgtctttgccaccccacctccacaa
atgaacccagcgccacagccccaacaggcgtactacagccgtcccagtctgcccagcaat
gcctcccgggtgccccccggcaacacgccgaggcccgtggcgcccacacacgtctaccag
ccgggccaacagatgatgatgatcccctcacagcagatccccttccccaaccaacaaggc
cccgcctacttcatacccggacagtaccggtcaacgtacgtggccaccccccagcagtac
ccggtcccgccgggcaccccaggcttctacccaggcaccagcccagctgaatatggtact
tatgcaggggcatactacccagcccaacagcagtacacgccctctgtgccggctgctccg
gttatcatgaaccctcccccccagcagcagcaactacctccacagcaacagatccagccc
aaaagggagcgcaaacaggtacagatcataatacgagaccctaaccagggtggtaaagac
atcactgaggagattatgtcagggggcactcgcagtggcaccacccccacacccccacag
atgagcgacgactcttcagagtcatctggatcagagggcccagccgttgcccaggccaac
ggtgaaaacgtgacacctgtcgtggtcagaccagatgacagagggaaacctgcagccaca
ctcatcactggccccccagccctgtctaaaacctctgaactggtcaagactgcccctgcc
cctacagaggtcaaactcccagacacggactgtaaatctccttccttaccccaggaccta
cccacacccccgcgggtaactaccaccctccacactactgcccctggtacccccccaccc
tcaactagtcccattgcagacatgatggatgcaccagccccggccgctgctccagcccta
tctgcccctaaagtgcctgcttaccctgcacccctgcctgaaccccgccccactcctgca
gccgaggagcagccctcagccgccaaggagacgtgggaggaggtgaagaagaagaaagag
gagattaaagaggtgacggaggctagagcagtgactacatcatctaaacctgagccttcc
cttgctccagtgaccaaccctagcagcagcactaacggtgtgtctgccacccagccactc
ccagaggaggagccagcagccctgtccatcaccatgccctctccccaggcagcaaaaccc
ccgctggagtctcccatcgcccagccagaggagctccggctgcccaacggcctgccgctc
cctagcccccaggaccctgagaaggtttctgcagagtcgtctgagtgtgacctcagcccc
atcgctgagcctgaggtgaccccattacagagggaggcacccgcgtctgtcgccgccatg
gtcacgcgcgaccccgttgtccaggcgaccgttgcccccgtggtcctagctgagactgct
agtactacagaggtaacccctcaccaaatggaagacgagatggactctccaccatcacag
cgcaccaccccacccggggcgaattctatgcaagctgctgtttctgtgcctaagaagaag
aggaagatgaagcatctgaacaggaaggaggctgttggagacctcctggatgcctttaag
gaggagcaggtagtgcagagcccgccagagcaggccacacccacttctgcctctgacacc
gaggagccccgcccagccgccacccctgccgtcgcagaggtggatgagacgtgggaggag
aaggaggacaaactggatgcagagaacattgaacccaagcccggggatctgaagtaccag
tacaaagaggaactatgtaggcctatagacccagaggagaagaagaggtatgacagggac
ttcctgctgggcttccagttcatcagtgctgccatgtccaagcctgagggcctgcctcag
atcagtgatgtggtgctggacaaggcgaataaggcccctctccgccagttggaccccagc
cgtttgccggggatgaacatgggcactgacttcacgccctcatttgccaacctgggcaga
cctggaatggggggggggggtggacacagaggaggaccaccctctggtatgggtggtgga
ggaccgcgtcgctcccagcagggccagcgtaaggagcccaggaggatcatcaacatctct
tcgtctctgacggacgacgtgaagctcaacaaggctgaggatgcctggaagcccgctgtc
aagaaggctgccagtgggcaagctgctcctgaggaggagagcgacgacccagaacaggcc
aagacccaggagctgtttaagagggtccgtagtatcctgaacaagctgacccctcagatg
ttccaacagctgatgaagcaggtcaaggagctgaccatcgatacggaggagaggctgaag
ggagtgatagatctgatctttgagaaagccatttctgaacccaacttctctgtggcctac
gccaacatgtgccgctgccttatggggctcaaagtccccactacagacaagccggaagtc
actgtgaatttccgcaagctgcttctgaaccgctgtcagaaggagtttgagaaggacaag
gacgatgatgtcatctttgagaaaaagcaaaaagagctggacgctgcagccgtggaggag
aaggatcgcctgaaggcggagttggaggaggccaaaaacatggcacggcggcggtcgcta
ggcaacataaagttcatcggtgagctgttcaagctcaagatgctgacggaggccatcatg
cacgactgcatcgtcaagctgctgaagaaccatgatgaggagtcactagagtgcctctgt
agactcttgtcaactatagggaaggacctggactttgaaaaggcgaagcctcgtatggac
cagtactttgtccagatggacaagatcatcaaggagaagaagacatcgtccagaatccgc
ttcatgctgcaggacgtactggacctcaggaggaatacgtgggtccccaggagaggagag
cagggccccaagaccatagaccagatccacaaggaggcagagctggaggagcacagggag
gttctcaaggtgcagcagcaactcctcaaccagaacacccgaggaggaggtggaggacgt
ggtggtggtggtggaggaggaagagatcaggggaaccgcgggggtcaacacccccaggcg
ggccagaggagtcagccccaggacgagggctggaacacagttcccatctccaccaagagc
aggcccatcgacaccagccgactcagcaagatcactaagcctggggctttggacttcaac
aaccagctgctggcgccccagctcgggggtaagggcatgtggggcagttggggcaagggc
agcagtggaggcaccaccggagccaaacccgccggggaagccaccccagagtcaggaggc
cgcccagccaccagcacccttaacaggttctcagccctgcagccacagcagccctcctca
ggtccctcacaggactcggacagaagagttcctctaaggtcagcaccactgagccggaac
agctcgagccgggaccgtggcagcgacagattcgagcgtcatgaccgtggcagcaacgac
cgcttcgacaggcgggacgaccgggacaggaaccggcacccggtcaccaagcggagcttt
agcagggagacggaggagcacagcagagagagggagcaccgcggcccttctgatcccata
cgccgcgtagccagcatgaccgacgaccggggcagcagagaccgagctaggagcaaagag
aatgtgaagagggaagctgctgcaacacctcctacccagaccaaaccttccttgacggaa
gaagagctggagaagaaggccacagctatcatagaggagtacctacacatcaatgacatg
aaggaggcgctgcagtgtgtagtggagatgaacagcacccagctgctctttgtgtttgta
cggagcggtctggagtctactctggagcgcagccccatcgccagagaacgcacaggcctg
ctgctgcaccagctgtacaaggcaggcaccctgcccacagagcagtactacagagggctt
caggagatactggaggtggcggaggacatggccatagacatcccccacatctggctctac
ctggctgagctcatcacccctatgctccacgaaggaggcatccccatgggaccgctcttc
aaggagatatccaagcccctggttcctcaggggacggctggagttctgctggtccagatc
ctcaccctactctgcagaggaatgagccgtaaaaaggcaggcaccatgtggagggaggcg
gggcttagctggaaagactttctgcctgaggacgaggacgtcaacaagtttgtgacagaa
aagaatgtggagttcacccttggaggagaaggtgatgagacagagaagagcagtaagaag
gagctgagctcagaggagctgaacaaacagctggacagactcatacaggacagggctgac
aaccagaggatctacgattgggtcgaggctaacctggacgagacacagatatcctccaac
gtgtttgtcagagcagtcatgacagccatctgccagtcggccatcctgtgtgagaaccct
tacaagttggatgcaaaggtgatcacccggagggccaagctgctccacaagtacctgaag
gatgagcagaaggagctgcaggctctctacgccttgcaggccctcatggtggagatggag
cagcctgccaacctgctgcggatgttctttgacacgctgtacgacgaagatgtgatcaaa
gaggacgccttctacaagtgggagtccagcaaggaccccgctgagatgcagggcaagggt
gtggcactgaagtcagtcactgccttctttacctggctccgtgaggccgaggacgaggag
tctgacaacagctag
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integrated database retrieval system
