Salvelinus namaycush (lake trout): 120028880
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Entry
120028880 CDS
T07522
Name
(RefSeq) nectin-3-like protein
KO
K06592
poliovirus receptor-related protein 3
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04514
Cell adhesion molecules
snh04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
120028880
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
120028880
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
snh04515
]
120028880
04090 CD molecules [BR:
snh04090
]
120028880
Cell adhesion molecules [BR:
snh04515
]
Immunoglobulin superfamily
Nectin family
120028880
CD molecules [BR:
snh04090
]
Proteins
120028880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2-set_2
Ig_3
ig
V-set
Ig_2
I-set
C1-set
Motif
Other DBs
NCBI-GeneID:
120028880
NCBI-ProteinID:
XP_038830061
UniProt:
A0A8U0PT04
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All DBs
Position
Sna34:18654584..18722936
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AA seq
558 aa
AA seq
DB search
MAKRLLLDYHKTLPLNGLQAVTVLLLIYGFTCVSSNEVLVPERVSAVLGKNITLGCRVEV
DTNLSLTQSSWERRLPSGTITLAVFNPQFGISISPDYARRLSFMNPSVHDATIILEGVGF
QDIGSYTCKVATFPLGNTQASITVNILVEPKVYVSAGSMALVDGGNESVAATCIAERGRP
AAEVSWETELFGRSEVQTQDEPNGTYTTQVRYVLEPRRHSQGHTLTCVVRHPALQTEFRI
PYVLNVQFAPEVTVVGYDQNWFVGQENVKLDCGAKANPPAHHFSWIRLDGPMPDGVDIVN
NTFSFTRPLERNDSGLYRCEVYNDIGPRSHDVHVWIQDPPPTTAPVPTTSTLLFLDTSDT
SMAPNKRRGASGHFTSPTLASLSDSSLGTIVGGAVGGVLLLGLLLILGGACFMRKRRTFR
GDYYTKQYLGPSDMQKESQLDVLQPHELQEVYGDGHNSTCKDSQELKPKPGLGGDIIYPN
DIKDKEDWGDGHRGLREGSYYPVENHNNIHHPKGPLVHTPTVTNGSPYLPEDCYDNGTDS
EYVSHMDGSVISRREWYV
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaaagattgctgctcgattaccacaagactctgccgctcaatggactgcaagcc
gtcacagttttgcttctcatttatgggtttacctgtgtgagcagtaatgaggtgctggtc
ccagagagggtgagtgctgtgctggggaagaacattactctgggctgcagggtggaggtg
gacaccaacctcagcctcacccagagctcctgggagcgtcgcctgccctcaggcaccatc
accctggccgtcttcaacccccagtttggcatctccatctccccagactacgccaggcgc
ttgtccttcatgaacccctccgtgcacgatgccaccatcatcctggaaggcgtgggtttt
caggacattgggtcttacacgtgtaaagtggcgactttcccgttgggaaacacgcaggca
tccatcaccgtcaatatactcgtggagcccaaggtctacgtctctgccggttcaatggcc
ctggtggatggtggtaatgagtcggtggcggccacctgcatagcggagcgcggccggcct
gcagctgaggtgtcctgggagactgagctgtttggccgctctgaggtccagacgcaggac
gagcccaacggcacctataccacccaggtgcgctatgtgttggagccacggagacactcc
cagggccacaccctcacctgcgtggtgcgccacccggccctgcagactgagttcaggata
ccctacgtgctcaatgtgcagtttgctcctgaggtgacggtggtgggatatgatcagaac
tggtttgttggtcaggagaatgtgaagttggactgtggagccaaagcaaacccacctgcc
caccacttctcctggatcaggttggatgggccgatgcctgacggtgtggatatagtgaac
aacacttttagtttcactcgtcctctggagagaaatgactctggactgtacaggtgtgag
gtgtacaacgacatcggtccacgcagtcatgacgttcacgtctggatacaagatcctccc
cccaccacggcaccagtccccaccacctctactctcctcttcctggacaccagtgacacc
agcatggcccccaacaagcggcgaggagcgagcggccacttcacctcacccaccctggcc
tccctgtcagacagcagcctgggtaccatagtgggcggggctgtgggcggggtcctgctc
ctggggttgctgctgatcctgggcggagcttgcttcatgcgcaagcggaggaccttcagg
ggtgactactacaccaaacagtacctgggcccctccgacatgcagaaggagtcccagctg
gacgtgctccagccccacgagctgcaggaggtctacggggacgggcacaactctacctgc
aaggacagccaggagctgaaacccaagccgggactgggaggtgacataatttaccccaat
gacatcaaggacaaggaggactggggcgacggccacaggggcctccgggagggcagctac
taccctgttgaaaaccacaacaacatccaccaccccaaagggccgctcgttcacactccc
actgtgaccaacggctccccctacctgccggaggactgctatgacaacggcacagacagc
gagtatgtgtcccacatggatgggtctgtgatctcacgcagagagtggtatgtctga
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