Salvelinus namaycush (lake trout): 120029004
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Entry
120029004 CDS
T07522
Name
(RefSeq) rho GTPase-activating protein 35-like
KO
K05732
glucocorticoid receptor DNA-binding factor 1
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04510
Focal adhesion
snh04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
120029004
09142 Cell motility
04810 Regulation of actin cytoskeleton
120029004
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120029004
Membrane trafficking [BR:
snh04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
120029004
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP_pG1_pG2
RhoGAP
RhoGAP-FF1
FF_RHG35_4th
Ras
GTP_EFTU
Cdh1_DBD_1
NOG1
FF
Motif
Other DBs
NCBI-GeneID:
120029004
NCBI-ProteinID:
XP_038830218
UniProt:
A0A8U0PRX9
LinkDB
All DBs
Position
Sna34:5900410..6002395
Genome browser
AA seq
1535 aa
AA seq
DB search
MMMAKKQDAKAPTYNLVVVGLSGTEKEKGQCGVGKSCLCNRFVRPSADDFYLDHTSVLST
SDFGGRVVNNDHFLFWGETGRVLEEGPECRMHVVEQTEFIDDQTFQPHRSTALQPYIKRA
ASNKLASAEKLMYFCTDQLGLEQDFEQKQMPEGKLMVDGFLLCVDVSRGMNRSFDDQMKF
ITNLYNQLAKNKKPVVLVLTKCDEGVERYIKDSHTFALAKKNLQVVETSARSNINVDLAF
LTLVQLIDKGRGKPKIIPYFEALKQQSQQIASAKDRYEWLVSRIVKNHNETWPNINRRMQ
TSSEYKEYVFLEGTAKAKKLFQQHVHRLKQEHIERRRRVYLSTLPQALGSLVPELDEIDH
LSWSVVQKVLETKQDFSHWFVVLDDTPWETTPHIDNMEDERIPQDLLETPVAETIYESHL
EHLKNERKRAEMRWEFKEKLSASPFITAGKPWEEARSFIMNEDFYQWLEEPEYLDIYNRH
QKEIIDRAKEDFQELLLEYSELFYELEVDAKPSKEKMGAIQEVLGEEQRFKALQKLQAER
DALVLKHIHFVYHPTKETCPNSPHCVDCKIEQVLASKFPTRYSFFESHKPGDGNADRINL
VILGKDGLGRELANEIRALCTNDDRYVLDGKMYELSLRPIEGNVRLPVNSFHTPTFTPHG
VLCLYNSKESLSYIMESIEKLRESTLGRRENSLFQLPMNLLLVTKRDIGGETAHTLILQG
QQVAGKLQCGYLDPASPGVGYGRNVNEKQINQVLKGLLECRRPPGSIGSSSPPLPPSFRD
SHSQPIPETDLRIVMCLMCGDDYDVEQLLSPLLLPQHCRPASSLSSGTSVLLELTVGAQR
HTIDLSLLSFHSSFALRKSRLVHGYIAVYSARRKASMETLCAFLCEVQDIIPVQLLAVGE
SQAELSDSEVAREQVSQGEELAREIEARFNTVVCGPGGVVGGLHRIDLFQPFLKEVVEKR
TIVEATHMYDNVAEACTTESMSPARCNSPSPINTLLDSEEDVEPSPPYPDVTLTSHLGGF
KLPDLESSDAFSVISEISTFESKLNNKVPPQVRPKPTIRKVNLGPYMDQQGTNRRSLPPA
VTWAPGSDGGYDPSDYAEPVDAVTKQRPTEEESIYSVPHDSTQGKIITIRNANKHSNGGG
NGSDSEADSSSLERRRKMSALGVKPRLYRDRSKRLGKFSSFRTSFSIGSDDELGPPKAPE
ELGGAHKGDNSINEEGEDPKRRNILRSLRRNTKKPRPKPRHSISKVESNYFGVPLANVVT
PDRPIPLFIDKCIRYIEATGITTEGIYRVSGNKSEMESMQRQFDQDHNLDLVEKDFTINT
VAGAMKAFFSELPEPLVPYSHQIELVEAFKINDRDQRVHAMKDILRRFPRENYDVFKYVI
NHLNKVSQNNRLNLMTSENLSICFWPTLMRPDFTTMDALTATRTYQTIIESFIHQCAFFF
YNQPLSDTPGGHASPTATLSSHGGTSAYSSLAYNSPSLTPAPAPYVMPATPPVIPHYGPP
HTQIQHSPPHTPQSPIQALLPPLHPHHPPTEQHML
NT seq
4608 nt
NT seq
+upstream
nt +downstream
nt
atgatgatggcaaaaaagcaagatgcaaaggcgcccacctacaacctggtcgtggtgggc
ctgtccggcacagagaaagagaaggggcagtgtggtgtgggcaagtcctgcctgtgcaac
cgcttcgtccgtcccagcgcagacgacttttacctggaccacacctccgtgctaagcacc
agcgacttcgggggacgtgtggtgaataatgaccacttcctgttctggggggaaacgggg
cgggtgctggaggaggggccggagtgcaggatgcatgtggtggagcagacagagttcatt
gatgaccagacgttccagccacaccgttccacagccctccagccctacatcaagagggct
gcctccaacaagctggcctctgcagaaaagctgatgtacttctgcacagaccagctaggg
ctggagcaggactttgagcagaagcagatgccagaggggaagctgatggtggatggcttc
ctcctctgtgtggacgtcagcaggggcatgaaccgcagctttgacgaccagatgaagttc
atcactaatctctacaaccagctagccaagaacaagaagccagtggttctggtgctcacc
aagtgcgatgagggggtggaacgctacatcaaggactctcacaccttcgccttggccaag
aagaacctccaggtggttgagacatcagcacgctctaacatcaacgtagacctggccttc
cttaccctggtgcagctgatagacaagggccggggcaaacccaagatcatcccctacttt
gaggccctgaagcagcagagccagcagattgcctcggctaaagaccgctatgaatggctg
gtcagccgcatcgtgaagaaccacaatgagacatggcccaacatcaaccggcgcatgcag
acctcctcagagtacaaggagtatgtcttcctggagggcacggctaaagccaagaagctc
ttccagcagcacgtccacaggctcaaacaggaacacattgagcgaaggagaagggtctat
ctcagcaccctgcctcaggcactgggttccctagtccctgagctggatgagatcgaccac
ctgagctggtccgtggtccagaaggttctggagaccaagcaagacttctcccattggttt
gttgtgttggacgacaccccctgggagaccacgccacacatagacaacatggaggacgag
aggattccccaggatctcctggagacccctgtggccgagacgatttacgagagccacctg
gagcacctgaaaaatgagcgcaaacgggcggagatgaggtgggagttcaaggagaagctc
agtgcctctcccttcatcacagcaggcaaaccctgggaggaggcacgcagcttcatcatg
aatgaagacttctatcagtggctcgaggaaccagagtacctagacatctacaacaggcac
cagaaggagatcatcgaccgagccaaggaggacttccaggagctgctgctggagtactca
gagctcttctatgagctggaggtagacgccaagcccagtaaggagaagatgggggccatc
caggaggtgttaggggaggagcagaggttcaaggcactgcagaagttgcaggcagagagg
gacgctttggttctcaagcatatccactttgtctaccaccccaccaaggagacctgccca
aatagcccacactgtgtggactgtaagattgaacaggttctagcctccaagttccccact
cgatactccttcttcgagagccataaacccggcgacgggaacgcagatcggataaacctg
gtcattctgggtaaagatggcctgggtagagaactggccaatgagatcagggctttgtgc
accaatgatgaccggtacgtgctggatgggaaaatgtatgagttgtccctccggcccata
gagggtaacgtgcgtctgccggtcaattccttccacacgcctaccttcaccccccatggc
gtcctgtgtctctacaactctaaggagtcactatcctacattatggagagcattgagaag
ctcagagagtccacgctaggccgaagggaaaacagtctatttcagctacctatgaacctg
ctcctagtcaccaaacgggacattgggggggaaacggcccacacgcttatcctccagggg
cagcaggtggctgggaagctacagtgtggttacctagaccccgcctcccctggggtgggc
tatggacgcaatgtgaacgaaaagcagatcaaccaggtgttaaaaggtctgttagaatgc
cgtaggccccctgggagcataggcagcagctcccctcctttacccccttccttcagagac
tctcactcccagcccatccccgagacagacctgcggatagtcatgtgcctgatgtgtggg
gacgattatgacgtggagcagctcctctcgcctctcctgctgccccagcactgtcggccg
gcctccagcctgagcagtggcacgtccgtgctcctagagctcacggtgggggcccagagg
cacaccatcgacctctccctgctctccttccactcctcatttgccctacggaagagccgg
ctggtgcacggctacattgccgtgtattctgccaggcgcaaggcgtccatggagaccctg
tgtgcgttcctgtgcgaggtgcaggacatcatccccgtgcagttgcttgcggtgggggag
agccaggctgagctgtcggactccgaggtggccagggagcaggtgagccagggggaggag
ctggcccgggagatcgaggccaggtttaacacagtggtgtgtgggcctggaggggtggtg
ggaggactgcacaggatagacctcttccagcccttcctgaaggaggttgtggagaaacgc
accattgtggaggccacacacatgtacgataatgtagcagaggcctgcaccactgagagt
atgagcccggcccgctgcaattcccccagccccatcaacaccctgctagactctgaggag
gacgtggagccctcgcctccctaccctgacgttaccctcacctcccacctggggggcttc
aagctccccgacctggagtccagcgacgccttctcagtcatctccgagatcagcaccttc
gagagcaagctcaacaacaaggtccccccccaggtgcggcccaagcccaccatacggaaa
gtcaacctggggccctacatggaccagcaagggaccaaccgccgctccttaccccctgct
gtcacctgggcgccgggcagtgatggtggctacgacccctcggactacgccgagcccgtg
gatgccgtgaccaaacagaggcccacagaggaggagagcatctactcggtgccccatgac
agcactcagggcaagatcatcaccatccgcaacgccaacaagcattctaacggcgggggc
aatggctcggatagcgaggctgacagcagctccctggagcggaggcggaagatgtctgct
ctgggggtgaagccgcggctgtaccgcgaccgctcgaaacgcctgggcaagttcagcagc
ttccgcactagcttctccatcggcagtgacgacgagctggggccgcccaaagcaccagag
gagctgggcggggcgcacaaaggggacaactccattaacgaggagggcgaggaccccaag
agaaggaacatcctcagaagcctgcgcagaaacaccaagaaaccgcggcccaagcccagg
cattccatatccaaagtagaaagcaactactttggcgtgccattggccaacgtggtgaca
cctgaccgacccatcccgctcttcattgacaagtgcatccgatatatcgaggcaacaggt
atcactacagaagggatctacagggtgagtgggaacaagtcagagatggagagcatgcag
aggcagtttgaccaggaccataacctggacctggtggagaaggacttcactatcaacacg
gtggccggggccatgaaggcctttttctctgagctgccagaacccctggtgccctacagc
catcagatcgaactggtggaggccttcaagatcaacgacagggatcagcgagttcacgcc
atgaaggacatcctgcgccgcttccccagggagaactacgacgtcttcaaatacgtcatc
aatcacttgaacaaggtgagccagaataaccgtttgaacctgatgaccagtgagaaccta
tccatctgtttctggcccactctgatgcggcctgacttcaccaccatggacgccctgacg
gccacacgaacctaccagacaatcatcgagtccttcatccaccagtgtgctttcttcttc
tacaatcagcccctgtctgacacccctggcgggcacgcctcccccaccgccaccctctcc
tcccacggaggaacctcggcctactcctccttggcgtacaactctccctccctcacaccg
gccccggccccttacgttatgcctgccacgccgcccgtcatcccacactacgggccgccc
catacccagatccagcattccccgccccacaccccccagtcccccatccaggccctactg
ccccccctgcacccccatcacccccccacggaacaacacatgctgtga
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integrated database retrieval system
