Salvelinus namaycush (lake trout): 120029028
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Entry
120029028 CDS
T07522
Symbol
slc8a2b
Name
(RefSeq) sodium/calcium exchanger 2b isoform X1
KO
K05849
solute carrier family 8 (sodium/calcium exchanger)
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04020
Calcium signaling pathway
snh04260
Cardiac muscle contraction
snh04261
Adrenergic signaling in cardiomyocytes
snh04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
120029028 (slc8a2b)
04020 Calcium signaling pathway
120029028 (slc8a2b)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
120029028 (slc8a2b)
04261 Adrenergic signaling in cardiomyocytes
120029028 (slc8a2b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
snh02000
]
120029028 (slc8a2b)
00536 Glycosaminoglycan binding proteins [BR:
snh00536
]
120029028 (slc8a2b)
Transporters [BR:
snh02000
]
Solute carrier family (SLC)
SLC8: Na+/Ca2+ exchanger
120029028 (slc8a2b)
Glycosaminoglycan binding proteins [BR:
snh00536
]
Heparan sulfate / Heparin
Others
120029028 (slc8a2b)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Calx-beta
Na_Ca_ex_C
Na_Ca_ex
Motif
Other DBs
NCBI-GeneID:
120029028
NCBI-ProteinID:
XP_038830241
UniProt:
A0A8U0PTC4
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Position
Sna34:complement(12186748..12216406)
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AA seq
933 aa
AA seq
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MSYPSMSPEFWSNSSTGLGGSSKCSQPVVCRPGTMLPVWKPLSPGLGDQVARAVVYFTCL
MYMFLGVSIIADRFMASIEVITSQEKEVTITMPSGETSVATVRIWNETVSNLTLMALGSS
APEILLSVIEVCGHGFEAGELGPGTIVGSAAFNMFVIIAICVWVIPEGETRKIKHLRVFF
ITAFWSIFAYIWLFLILSVISPGVVEVWEALVTLLYFPVCVILAWIADRRLLFYKYMAKR
YRADKHGIVVETEGDTTPKGFEMIMDGKFPPRGGAVGMMPSENCQDGANNAAGTVAYLPN
SNSTMVTVENTKELDESRKEVIRILKQLKQKFPDKELDQLVDLANYYALLHQQKSRAFYR
IQATRMMTGAGNVLKRHAADHSRRAAAVDEEVVCEDDDLAECSRLAFESTHSQCMENCGV
LRLAVVCQGGLGESTFYVDYRTEDGSANAGSDYEYSEGTLVFKPGETRKEIKVGIIDDDI
FEEDEHFFVRLLNLRIGDAEGMFESDEPGARPKGRLVEPLVATVTILDDDHAGFFTFRNR
LVRISESVGTMEISVVRNSGARGTVILPYHTEEGTAKGGGVDYEDTQGELEFSNDQTTQT
LQVRIIDDEEYEKKENFFIVLEEPRWLKRGISGVCTCSFEYDPDGQMSAEEEEARRIAEM
GKPILGEHSRLEVVIEESYEFKSTVDKLIKKTNLALVIGTHSWREQFVEAVTVSAGDGDD
DDEEGREERLPSCYDYVMHFLTVFWKVLFAFVPPTEYWNGWACFFVSISVIGILTAIIGD
LASHFGCTVGLRDTVTAVVFVALGTSIPDTFASKVAATQDQHADASVGNVTGSNAVNVFL
GIGVAWSVAAVYWNVQGKEFRVDPGSLAFSVTLFTSFAFICMGVLLFRRRPSIGGELGGP
RTARIITSLLFLGLWFLYVLFSSLEAYCHIEGF
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
atgtcctatccctccatgtctccggagttttggagcaacagcagtacggggctgggcggc
agttcaaagtgctcgcagccggtggtgtgcaggccgggcaccatgctgcctgtgtggaag
cccctgagccccgggctgggcgaccaggtggccagggctgtggtctacttcacctgcctc
atgtacatgttcctgggagtgtccatcatcgcagaccgcttcatggcctctatcgaggtc
ataacctcacaggagaaggaggtgaccatcaccatgccaagcggagagacgtctgtggct
actgtacgtatctggaacgagactgtgtccaacctgactctgatggctctaggctcctcc
gccccagagatcctgctgtctgtcatagaggtgtgtgggcatgggtttgaggcgggtgag
ctgggccctggtaccattgtgggcagcgccgccttcaacatgtttgtgatcatcgccatc
tgtgtgtgggtcatccctgaaggagagaccaggaagatcaaacacctgcgtgtgttcttc
atcacagccttctggagtatcttcgcctatatctggctcttcctcatcctctctgtcatc
tcacccggagtagtggaggtgtgggaggctctggtcaccctgctctacttcccagtgtgt
gtgatcctggcctggatcgccgaccgacgcctgctcttctacaagtacatggccaagcgt
taccgcgccgacaagcacggcatcgtcgtggagacggagggggacacaaccccgaaaggc
ttcgagatgattatggacggaaagttcccacctaggggaggggcggtgggaatgatgccc
agtgagaactgccaggatggggccaacaatgcggcgggcaccgtggcctacctacccaac
tccaacagcaccatggtgaccgtagagaataccaaggagctggacgagagccgcaaggag
gtgatccgcattctgaagcagctgaaacagaagtttccggacaaggagctggatcagctg
gtagatctagccaactactacgccctcctccatcagcagaagagccgcgccttctaccgc
atccaggctacgcgcatgatgaccggcgccggcaacgtgctcaagaggcacgccgccgac
cactcccgccgcgccgccgccgtggacgaggaagtggtctgcgaggacgacgacctggct
gagtgcagccgcctggcgttcgagagcacccacagccagtgtatggagaactgcggcgta
ctgaggctggctgtggtgtgtcaagggggcctgggggagagcaccttctacgtggactac
cggaccgaggacggctcggccaacgccgggtctgactacgagtacagcgagggaacgctg
gtgttcaaacccggagagacccgcaaggagatcaaggtcggcatcatcgatgatgacatc
ttcgaggaggacgagcactttttcgtgcggctgctcaacttgcgcatcggtgacgccgag
gggatgttcgagagtgatgagccaggtgcgagacccaagggtcgcctggtggagccactg
gtcgccacggtgaccatcctggacgacgaccatgctggattcttcacattccgtaatcgg
ctggtgcgcatcagcgagagcgttggcaccatggagatctcagtggtgcggaactcgggc
gcccgcggcacggtgatcctgccctatcacacggaggagggcacggcgaaggggggcggc
gtggactacgaggacacccagggagagctggagttctccaatgaccagacaactcagacc
ctgcaggtgaggatcattgacgatgaggagtatgagaaaaaggagaacttcttcatcgta
ctagaggaaccacgctggctgaagaggggaatctcaggtgtgtgtacttgtagttttgaa
tatgatcctgatggccagatgagtgcagaggaggaggaggcgaggcgcattgcagagatg
ggaaagcccatcttgggggagcacagccggctggaggtggtcattgaggagtcttatgag
ttcaagagcaccgttgacaagctcattaagaagaccaacttggcccttgtgattggcact
cactcctggagggagcagttcgtggaagctgtgactgtcagcgcaggtgatggtgatgat
gatgacgaggaggggcgtgaggagcgtctgccatcctgctacgactacgtcatgcacttt
ctgacggtgttctggaaggttcttttcgccttcgttccgcccaccgagtactggaatggc
tgggcctgcttcttcgtgtccatctcggtcatcggcatcttgactgccatcatcggggac
ctggcctcccactttggctgcactgtgggcctcagggacactgtcactgccgtggtgttt
gtggctcttggcacctccattcctgacacgtttgccagcaaggtggcggccacgcaggac
cagcacgctgatgcgtcggtgggcaacgtgactggcagcaacgcggtcaacgtgttcctg
ggcatcggggtggcgtggtcagtggcggccgtctactggaacgtgcagggcaaggagttc
cgcgtggaccctggctccctggccttctccgtcaccctcttcaccagcttcgccttcatc
tgcatgggtgtgctgctgttccgccggcggccctctatcgggggggagctgggcgggccg
cggacagcacgcatcatcaccagcctcctcttcctgggcctctggttcctctacgtcctc
ttctccagcctggaggcctactgccacatagagggcttttag
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