Salvelinus namaycush (lake trout): 120029201
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Entry
120029201 CDS
T07522
Name
(RefSeq) remodeling and spacing factor 1-like
KO
K11657
remodeling and spacing factor 1
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
120029201
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
snh03036
]
120029201
Chromosome and associated proteins [BR:
snh03036
]
Eukaryotic type
Chromatin remodeling factors
RSF complex
120029201
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Motif
Pfam:
PHD
WHIM1
WSD
DDT
Motif
Other DBs
NCBI-GeneID:
120029201
NCBI-ProteinID:
XP_038830422
UniProt:
A0A8U0PU58
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Position
Sna34:15121520..15142616
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AA seq
1364 aa
AA seq
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MAALAAAQGSNPGLCPSFAVVCSFLERYGQALDLPELTFPQMERYLRDTSTVPKPLVELH
VKLLRKLGKSVSADKWERYLAKVCQDINSSWAWELEHKGYQDLSMECKTSILKYLCEIQF
DDNLKFKTLVNEEEAEAMRLQPLGRDRQGLMYWLQTDAQHNIRLYTEEQDDWDGSTWRCI
VRTRNDLADALELLKTQLDPEHKEKEEGEKEMDREKEGGSNFATPVERGRRHTEEGKISV
VTSEAGGEVKEEEEEEARQKRKAEEDKNKSKEREKKEEEEDKREKSRSSTYPESTSTDDN
MASLAEKENPTKPEPLFSVKEENIAVEMKEEKEMKKYEEKEEGETESVRKEERSEVIDNR
VSTITALVKEETQTLNNSPSNAVSVVMAPVSAMTKQEVPPVKEEAERALRTDQQAKIPLK
KRELFGANRHHSNTHHNNDMHSNQHNNNSHSSSTSSSIIVRNPSVTHTKEEQLGRQSAPP
GGLAVPLPEELTNGGAPLNGLGGLTGGIGHVGVICRSASQQQDGGSFCTDRTKPLAEEGA
DRARAPDKERSRQSVLVRKSPGWGETEAPTPLEPRGQERQAGREERERKEKGGRSRERLG
EDGREKARERLDGDLSGERDDNPKEKEEKEKKTTLHMEKSEGCHGTEEEEKKSTSGEKEQ
ESKSSQTVEGQRDQGEALSTDTPAHAGVRGAGHGAADWPGPLEASSELQKEGIRLKIKIP
PNQRIENVREEEEKGEEQGDGRSLRRSARICRPSPNKVKSQDAPPGVRREEEEVKTAQWQ
KKRANPEGQSRTVKSRRRQRGARWSNTRAKRCKPNEGGEEGEERGREGSICDSDESSQSE
EMPNEDPCSHCGLPNHPELILLCDSCDSGYHTACLRPPLMVIPEGEWFCPPCQHKLLCDR
LEEQLQNLDCALKKRDRAERRRERLVYVGISVENIIPQEGEEEEEKLVKKKDAKNTKNLG
RRSTRTRKCISYRFDDFDDAIDEAIEEDVRDEDGGEVGRGKDMATILSEEGKEKRGPTTA
QAPPTRSRKRRRLNDLESDSTAAESEEEFQLSASTEEEEFVASGDEEAASDVDSFASDPG
FVSQSTRAQRRAPKQRTSRTAAKCKKRPRRRRRGWGEEEEESEEEEEMETSDLSDSDGDR
KRCGLRRGRKREVNYRETSESECSQATTNKDKAKPRRRRLSSSNSDESSHSRESEEEEKR
MRGKRRQEEVEESRTRGKKRRGEKMGRGKRRKVLIEQRKKRLALLKKSRPSTKDDEDDND
EGESESSSEEDRPIRKRLNRIDSDEEEEKEGENEEDEEEDDEEEEKKLRKPSSKDKESNS
PNGQQPSRGSTQPGSESAALPRDRAARAGQNRSNSPPPPDQSDA
NT seq
4095 nt
NT seq
+upstream
nt +downstream
nt
atggctgctttagcggcagcgcagggctcaaaccccggtctctgccccagtttcgcagtg
gtctgctcgttcctggagcgctacggacaagccctggacctccccgaactcacgtttccg
cagatggagaggtatctccgggacacatcgacagttcccaagccgctggtggagctgcat
gtcaagctcctgaggaagcttggcaagtctgtgtctgcagacaagtgggagaggtacctg
gctaaggtatgccaggacatcaacagtagctgggcatgggagctggaacacaagggctac
caggatttgagcatggagtgcaaaaccagcatcctcaaatacctatgtgagatccagttt
gatgacaacctgaagttcaagacgttggtgaacgaggaggaggcggaggcaatgaggctg
cagcccttgggcagagacagacagggcctgatgtactggctgcagactgacgcccaacac
aacattcgcctgtatacagaggaacaggacgactgggacggatccacctggagatgtatc
gtcagaacccggaacgacttggccgatgctctggaactcctgaagacccagctggaccca
gaacacaaggagaaagaggagggagagaaagagatggacagagagaaggagggaggatcc
aactttgccacgcctgtggagagggggagaagacacacagaggagggtaagatttctgtt
gttactagcgaggctggaggagaggtaaaggaggaggaagaggaggaggcaagacagaag
aggaaggctgaggaagacaagaacaagagtaaagagagagagaagaaggaggaagaggag
gataagcgagaaaagagtagatcatctacctacccagaatccactagtacggatgacaac
atggcatcgttagcagagaaggaaaacccaaccaaacctgaaccgttattctcagtgaaa
gaggaaaacattgcagttgagatgaaggaagaaaaggaaatgaaaaaatatgaggagaaa
gaagagggagagacagagagtgtgaggaaggaggagaggtcagaagtgattgacaacaga
gtgagcaccatcaccgcgctcgtcaaagaggagacccaaacgcttaacaactcccctagc
aatgctgtctccgtcgtcatggcgcccgtctcggcaatgacaaaacaggaagttcctcct
gtgaaggaggaagcggagcgggccctgaggaccgaccaacaggccaagataccactgaag
aagagagagctctttggcgctaaccgtcaccatagcaacacacatcacaacaatgacatg
cacagcaaccaacacaacaacaacagccatagcagcagtactagcagtagcatcattgtc
cgtaacccttcagtaacacataccaaggaggagcagctggggaggcagtcagcgccacct
gggggcctagctgtcccactgccagaggagttgaccaatgggggggctcccctaaacggg
cttggagggctcacagggggtataggtcatgtgggggtcatctgcaggtcggcctcacag
caacaagatggcggatcattctgtacagacagaaccaaacctttggcagaggagggggcg
gatagggccagagctccagacaaggagaggagcaggcagtcagtcctggtgaggaagagt
cctggctggggagagactgaagccccaacacccctggagcctagaggacaggagagacag
gcaggaagagaggagagggaaaggaaggagaaaggagggagatcaagggagaggttagga
gaggatggaagagagaaagcgagggagaggttagatggagacctgtctggagagagggat
gacaacccaaaagaaaaagaagagaaagagaaaaagaccaccctccatatggagaaaagc
gagggatgccatggaacagaggaagaggagaagaagagtacttcaggagagaaggagcag
gagtcaaagagcagccagactgtagaaggacagagggaccagggagaggccctcagcaca
gacacaccagcccatgccggggtgaggggagctgggcatggagcagcagactggccgggt
ccccttgaggcctcctctgagctgcagaaagaagggatcaggctgaagataaagatccct
cccaaccagaggatagagaacgtgagagaagaggaggagaagggggaggagcagggagat
gggaggtctctgcggagatcggctcggatctgcagacccagcccaaacaaggtgaagagc
caagatgcacccccaggagtgaggagggaagaagaggaggtgaagactgctcaatggcaa
aagaagagagcaaaccctgagggacaaagcaggactgtaaagagcagacgaagacaacga
ggcgcccgctggtcaaacactcgagcgaagagatgcaaaccgaatgagggaggagaggag
ggggaggagagagggagggagggaagtatttgtgactcagatgaatctagccaatcagag
gagatgcctaatgaagatccctgcagccactgtggactccccaaccaccccgaactgatc
ctgctgtgtgattcatgtgatagtggttaccacaccgcctgcctcagaccccctctcatg
gtcatacctgagggagaatggttctgcccgccctgccaacacaaactgctgtgtgacaga
ctagaggagcagctgcaaaatctggattgcgctctgaagaaaagagaccgagctgagagg
aggagggagcgtctggtgtatgtgggaatcagtgtggagaacatcattcctcaggaaggg
gaggaagaagaggagaaactggtgaagaagaaagatgcaaaaaataccaaaaacctggga
aggaggtctaccagaaccaggaagtgtatcagctacaggtttgatgactttgatgacgcc
attgatgaagcgatagaggaagacgtcagagatgaggatggaggagaggtggggcggggt
aaggacatggccaccatcctatcagaggaggggaaggagaaacgaggaccaaccacagct
caggcccctcccaccaggagcaggaagaggcggagactcaacgacctggagagcgacagc
acggctgcagagagcgaggaggagtttcagctcagcgccagtacggaggaggaggagttt
gtagcgtcaggtgatgaggaagcagccagtgatgtggacagctttgccagcgacccgggc
ttcgtgagccagtccacacgggcacagagacgggcacctaaacagagaacctccaggacc
gcagcaaagtgcaagaaacgcccacgcagacggaggagaggatggggggaggaggaggag
gagagtgaagaggaagaggagatggagaccagtgatttgagtgacagcgatggagacagg
aagaggtgtggtttaaggaggggccggaagcgggaggtgaactaccgcgagacgtcagaa
tccgagtgttcccaggcaaccaccaataaggataaggccaaaccccgccgccgtcgtctc
tccagctcaaacagcgatgaatcctcccattcgagagagtctgaggaggaagagaagaga
atgaggggaaaaaggcggcaagaagaggtggaggagagtagaacaaggggaaagaagagg
agaggagagaagatgggcagagggaagcggaggaaggtgttgatagaacagcggaagaaa
cgtctagctctgctgaagaaaagcagaccctccactaaagatgatgaggatgataacgat
gaaggggaatcggagtcgtcatccgaggaagatcgtcctatccgcaaacgacttaaccgc
atcgactctgatgaagaggaggagaaagagggggaaaatgaggaggacgaggaagaagat
gatgaagaggaggagaagaagctgagaaagccgtcatcaaaagacaaggaatcaaacagc
cctaatggacagcagccctctagaggctcaacacagcctgggtctgagagtgcagcatta
cccagggacagagctgccagagctgggcagaacaggtctaacagccccccacctcctgac
cagtcagatgcatga
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