Salvelinus namaycush (lake trout): 120029207
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Entry
120029207 CDS
T07522
Name
(RefSeq) U1 small nuclear ribonucleoprotein A-like
KO
K11091
U1 small nuclear ribonucleoprotein A
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120029207
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
snh03041
]
120029207
Spliceosome [BR:
snh03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
120029207
Complex B
120029207
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Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_5
DUF4523
xRRM
Motif
Other DBs
NCBI-GeneID:
120029207
NCBI-ProteinID:
XP_038830429
UniProt:
A0A8U0PSJ5
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All DBs
Position
34:4704929..4707671
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AA seq
281 aa
AA seq
DB search
MAAPDMRLNHTIYINNLNEKIKKDELKKSLYAIFSQFGQILDILVARSLKMRGQAFVIFK
EVNSASNALRSMQGFPFYDKPMRIGYAKGDSDIIAKMKGTYVERDRKKEKRAKVKGPEAA
GAKKGVPGTPVVPMGPGVPTPMPGMPPMSGAPRMMQMPGQPPYMPPPGMMPPPGMGPGGM
PPGAMPPGGMMPGQMPHAQVAENPPNHILFLTNLPEETNELMLSMLFNQFPGFKEVRLVP
GRHDIAFVEFDNDVQAGAAREALQGFKITQTNAMKISFAKK
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atggctgctccggatatgcgtctcaaccacaccatatacatcaacaacctaaacgagaag
attaaaaaagatgaactgaagaagtcgttgtacgccattttctctcagtttggtcaaatc
ttagacattttggttgcccgctccctgaagatgaggggtcaggcctttgtcatcttcaag
gaggtcaacagcgcctccaatgccctgcgttccatgcaggggttcccattctatgacaaa
cctatgcgtattgggtacgccaaaggggattctgacatcatcgctaaaatgaagggcacc
tacgtggagcgcgaccgtaagaaggagaagagggccaaggtcaagggcccagaggctgca
ggggccaagaagggtgtgccaggaacccctgtagtacctatgggccctggagttccaaca
cccatgcctggaatgccacccatgagcggggctcctcgtatgatgcaaatgccagggcag
cccccttacatgcccccgccaggcatgatgccacctcctgggatgggccctgggggaatg
ccccctggtgccatgcctccgggtgggatgatgccagggcaaatgccccacgcccaggtt
gcagaaaaccctcccaaccacatccttttcctcaccaacctcccagaggagaccaacgag
ctcatgctgtctatgctcttcaaccagttccctgggttcaaagaggtgcgtctggtacct
ggtcgccacgacatcgcctttgtagagtttgataatgacgtgcaggctggagcggccagg
gaggcactacagggcttcaagatcacccagaccaacgccatgaagatctcattcgccaag
aaataa
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