KEGG   Salvelinus namaycush (lake trout): 120029315
Entry
120029315         CDS       T07522                                 
Name
(RefSeq) chondroadherin-like
  KO
K06248  chondroadherin
Organism
snh  Salvelinus namaycush (lake trout)
Pathway
snh04510  Focal adhesion
snh04512  ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:snh00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    120029315
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    120029315
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:snh00535]
    120029315
Proteoglycans [BR:snh00535]
 Extracellular matrix (ECM) proteoglycans
  Small leucine-rich proteoglycan (SLRP) family
   class IV
    120029315
SSDB
Motif
Pfam: LRR_8 LRR_4 LRR_1 LRR_5 LRR_14 LRRNT LRR_9 LRR_LRWD1 LRR_NXF1-5
Other DBs
NCBI-GeneID: 120029315
NCBI-ProteinID: XP_038830463
UniProt: A0A8U0TW09
LinkDB
Position
Sna35:33862637..33873910
AA seq 363 aa
MPCVSFLLVGTCLLVLGPAVWGAPSQCPAQCHCHGDLQHVICDNVGLKKIPQVSEATRLL
NLQRNNLGSLPTGSFASSKGLISLHMQHCQLKEIGGQAFKGLKKLIYLYLSNNEITSIKP
GAFEDLTELTYLYLDGNRISDLPKGIFSPMINLFILQLNDNKLRDIKPGTFAGAKDLRWL
HMSGNEMNSLQPGSLDDVENLAILHLDRNRLSTYPGLAMSKLRVVEELSLAKNPLRSIPD
NAFQSFGRYMEKLHLDGMGLEKFSDAAFNGVTAIKSLHLDNNKLKSLPNSLEFTTITNLT
LSNNPWSCTCTLAPLRKWMDSSRQRPDALCVSPSSQRGKQIRDSSAFSSCKVKTKRAKKG
TRH
NT seq 1092 nt   +upstreamnt  +downstreamnt
atgccgtgtgtgagcttcctgttggtggggacttgcttgctggtcctcggcccggctgtt
tggggcgcccccagccagtgcccggctcagtgtcactgccatggggacctgcagcatgtc
atctgtgacaacgtggggctgaagaagatcccgcaggtgtccgaggccacccgtctgctc
aacctgcaaaggaacaacctgggcagcctgcccaccggctccttcgccagcagcaagggt
ctcatctcgttgcacatgcagcactgccagctcaaggagattggtggccaggccttcaag
ggactcaagaagctaatctacctctacctgtccaacaacgagatcaccagcatcaagcca
ggtgccttcgaggacctcaccgagctcacttacctctacctggatggcaaccgcatcagc
gacctgcctaagggaatcttctcacccatgatcaacctgttcatcctgcagctcaacgac
aacaagctgcgtgacatcaagccaggcaccttcgccggagccaaagacctgcgctggctg
cacatgagtggcaatgagatgaactcgctgcagccgggctctctggacgacgtggagaat
ctggccatcctgcacctggacaggaacaggctgtccacctatcctggcctggccatgagc
aagctgagagtggtggaggaactgagcctggccaagaaccccctgaggagcatccccgac
aacgccttccagagcttcggacgctacatggagaagctgcacttggatggcatggggctg
gaaaagttctctgacgctgcattcaacggagtgacggccatcaagtctctgcacctggac
aacaacaagctcaagtccctccccaacagcctggagttcaccactatcaccaacctcacg
ctctccaacaacccctggagctgcacctgcacgcttgcccctctgcgcaagtggatggac
tctagccgccagcgccctgatgcgctctgtgtctctccgtcctcacagagaggaaagcag
atcagagacagctctgccttcagcagctgcaaagtcaagacaaagagagccaagaagggc
acgcgtcattaa

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