Salvelinus namaycush (lake trout): 120029402
Help
Entry
120029402 CDS
T07522
Name
(RefSeq) lutropin-choriogonadotropic hormone receptor-like
KO
K04248
lutropin-choriogonadotropic hormone receptor
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04020
Calcium signaling pathway
snh04080
Neuroactive ligand-receptor interaction
snh04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
120029402
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
120029402
04081 Hormone signaling
120029402
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
snh04030
]
120029402
G protein-coupled receptors [BR:
snh04030
]
Rhodopsin family
Peptide
Lutropin-choriogonadotropic hormone
120029402
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
LRR_8
LRR_5
LRR_R13L1-DRL21
LRR_14
Motif
Other DBs
NCBI-GeneID:
120029402
NCBI-ProteinID:
XP_038830551
UniProt:
A0A8U0TWM1
LinkDB
All DBs
Position
Sna35:12758666..12811643
Genome browser
AA seq
673 aa
AA seq
DB search
MAPARRTVWVLLALSVVLNLRSCWTFTCPSICKCSLKSDTCYKDTGEKLSCTRETQLRSQ
AAPSFIRNLRLTHLPLNEVPSNAFRGLINVSRIEISQSDCTRYIRNHALLSLHSLTEIQI
QNIRNLISIEKGAFTDLPKLRYLSICNTGIIHFPDFSTISSLVILDELGDNMQLHSIPAN
AFQGITEESVYMKIIKNGFKEIKSHAFNGTKLDKLILKDNRYLRNIHEDAFEGASGPTVL
DVSSTALDTLPRRGLEHLKVLIARSTPYLKTLPPLESLLELEVAEITYPSHCCAFHTWRR
KDNFYRDHSADIVTDLYDINLQYPDLQLSLCPGPFQCTPESDAFNPCEDLLGYSFLRSVT
WLITVFAVAGNMAVLVVLIISHQKLNVSRFLICNLAFADLCMGIYLLLIAAMDYHSRKEY
YNHATFWQTGAGCGVAGFLTVFASELSVYTLTMITLERWHTITNAMHKNKRLRLRHVVAM
MAGGWGFSLLAALLPVLGVSSYTKVSICLPMDIESLASQVYVVALLLLNVTAFFIICYCY
VRIYLSIHNPDLAIRHGDSKIAKRMAVLIFTDFICMAPISFFGISAALRMPLITVSHSKI
LLVLFYPINSLCNPFLYTIFTRSFRKDIRLLLSRCSFCHARAEFYRAQTFCSNNLNQTFS
VVADQTCTTDGHS
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atggcaccagcaaggcggacggtgtgggttcttctcgcgctgtctgttgttctgaatttg
cgctcctgctggactttcacttgtccgtcgatttgcaaatgttcattgaagagcgataca
tgttacaaagacacgggagagaaactcagttgcacgagggaaacgcaactgaggtcccaa
gccgctccatcgtttattcgaaacttaagactaactcatctgccgttgaatgaagttcca
agcaatgccttcagaggactgatcaacgtttccagaattgagatatctcagagtgactgc
accaggtacataagaaaccatgcactcctctctctccacagcctgactgagatacagata
cagaacatcagaaatctgatcagtatagagaagggggccttcactgatctgcccaagctg
agatacctgagtatctgtaacacaggaataatacactttccagacttctccaccatctcc
tccctggtcatactggatgagctgggagacaacatgcagctccacagtatacctgccaat
gcctttcaagggatcacagaggagagtgtgtacatgaaaattataaaaaatggattcaag
gaaatcaagtcgcacgctttcaacggaacaaagctggataaactgattctgaaagacaac
aggtatctgaggaacattcatgaagatgcctttgagggagcgtcagggccaactgtgctt
gatgtctcctccacagctctcgacacactcccccgtcgaggcttggaacatttaaaagtc
ctgattgcccgttctaccccgtacctgaagactctacctcctctagaaagcctcctagag
ctggaggtggcagagatcacttaccccagccattgctgtgccttccacacctggcgacgc
aaagacaatttctacagggaccactcagcagacattgtgacagacctgtacgacatcaac
ctccaatacccagacctgcagctgagcctgtgtcctggacccttccagtgtaccccggag
tccgacgctttcaacccctgtgaggacctgctggggtactccttcctccgctcagtcacc
tggctcatcactgtatttgctgtggccgggaacatggccgtgctggtcgtactgatcatc
agccaccagaagctcaatgtctctcggttcctgatctgtaacctggccttcgcagacctc
tgcatggggatctacctcctcctcattgcagccatggactaccactcacgcaaggaatac
tacaaccacgccacgttctggcagacgggtgcgggctgtggcgtggcggggttcctgacg
gtgttcgccagcgagctgtccgtctacacactgaccatgataacgttagagcggtggcac
accatcaccaacgccatgcacaagaacaagaggctgcggctgaggcatgtggtagccatg
atggctggggggtggggcttctccctattggccgctctgcttcctgtcctcggggtcagc
agctacactaaggtgtcaatctgcctgcccatggacatcgagtccctagcctcccaggtg
tatgttgtagcactcctcctcctcaacgtcactgcctttttcatcatctgctactgctac
gtacgcatctacctgtccatccacaaccccgacctagcaatccgtcacggtgactccaag
atcgccaagcgcatggccgtcctaatcttcaccgactttatctgcatggcacccatctcc
ttcttcggcatctcggcggctctccgcatgcccctcatcaccgtctcccactccaagatc
ctgctcgtcctcttctacccaatcaactccctctgtaaccccttcctctacaccatattt
actcgatcgtttcggaaggatatacgtttgttgttgagtcgctgtagtttttgccatgcc
agagcggagttctacagggcacagaccttttgcagcaataacctcaaccaaacgttttct
gtagtcgcggatcagacttgcacaacggatggccactcctaa
DBGET
integrated database retrieval system
