Salvelinus namaycush (lake trout): 120029412
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Entry
120029412 CDS
T07522
Symbol
fbxw10
Name
(RefSeq) CMT1A duplicated region transcript 1 protein
KO
K10266
F-box and WD-40 domain protein 10
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
snh04121
]
120029412 (fbxw10)
Ubiquitin system [BR:
snh04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
120029412 (fbxw10)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_WDHD1_1st
WD40_Prp19
WD40
WDR55
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
Beta-prop_EML
Beta-prop_SCAP
WD40_like
Beta-prop_DCAF4
Beta-prop_WDR90_POC16_2nd
F-box-like
Beta-prop_SPT8
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
F-box
Beta-prop_Vps41
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
120029412
NCBI-ProteinID:
XP_038830557
UniProt:
A0A8U0PUE5
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Position
Sna35:complement(15643992..15663986)
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AA seq
1055 aa
AA seq
DB search
MTTWSQDRAFDTKLLGMEMVDTWDWFSRSHHWTKSNYLLGILSLCDTGLLHMLGNLTILE
DEDHEDDTSSIPESTYSFNSQEGHPDLDLLICASSFYDPVNMHHETDIDTIDGGQETCHD
PELSKSCQLHVAPWAVVGASPTSEGLQGFGSVCMGVVKEDSDTDSTCSDDPALMVVPRSS
TSLSGVCRYRNFIRGLPVHLAKRILGLLDKTSLNSCRDVSQHWRYLTEDTQEDLNAKKMV
EKQAMLMQSNTTGVSSTYAKVRKVLVPIREDEKHMHHGEIFSKIRQERGFEAIYAGVRTR
AIQMEERNVYCGVYNVLVLLDREDPSRVVHYSGGQLVAVGSKDRVVRLLDVLTLKEVSPV
IQGHAGSIRALLLCEERGLVISASYDLSIRCWNLKTGVCLMLFRGHLGTINCLDLHGNCL
VSGANDCKVKVWNLQTGHCYEKLKFRHHHPILCVKIDKALVMSSCDKGLVKMWGMETASL
LKVIDAHQSSVKCLFFDQWHILSGGSDGQVMAWSTNCDIKKNLMTYRHPKEVLALIYLFL
RVITGCEDGKIRIFNFLTGDCLRVIKAGGQHSPIQSLHTHNNNMVVNTGTSVLIYQFTRV
RWDYSVLAEREFFNEFRGTLKSMLNKDKYPYSNVRAERMTQVGSSNRKIYDREGKKPERP
ELSHHTRSLSAPSMRRAQAAQQESMRPATWSELQGHRRSRAYIDLQPEFITKPPSAISPG
RPVSGHSQDSQSRASHTPRSETTGSARELSVMTKWVLTRSEKAVKDRVKKRGPHRPVTPQ
HVLLKVNSTHQPQGSDQAGANMKLNAQIRDAWGSPPPVQGVDPEPHASPFPPTTPKQSPQ
SQSQKAPAGPSHQVLQHGMNKTYVPLMTRTLDLKLRQSLDSREVCSSSPSPAVMRPHTSH
AASTQRTPCPEPEKKRPQTSCGIAGLAVRKVGAFTTTAQSNVQAPQRMFMKVSSKRPGRH
VDFEMPNKTISQYNPLDPFRERGAFRLHTDTQLEEYFRVQNHQLNQQGEGCYRTRNDQDR
QRKGVWKMKVKGVPALDFPKQDQVYAPELGHEIYI
NT seq
3168 nt
NT seq
+upstream
nt +downstream
nt
atgaccacttggagccaggaccgagcgtttgacaccaaacttcttgggatggagatggtt
gacacttgggactggttcagtcgcagccaccactggacaaaatccaactatcttttagga
atcctttccctctgcgatacagggcttcttcacatgcttggaaacttgacaatactggag
gatgaggatcatgaggatgacacctcctctatcccagaatccacctactctttcaactct
caggagggtcatccagacctggacctcctcatctgtgccagctctttctatgaccctgtc
aacatgcaccatgaaactgacatcgacaccatcgatggaggccaggagacatgccatgat
ccagagctctccaagagctgccaactccatgtagctccatgggcggtggtgggtgccagc
cctacctctgaaggcctgcagggctttggcagtgtgtgtatgggggtggtgaaggaggat
agtgacacagactccacctgttcagacgaccctgctctgatggtggtccctcggtcctcc
acctctctgtctggggtctgccgatacagaaacttcatccggggtctccctgttcatctt
gccaagaggattttaggtcttctagacaagacctctctgaacagctgcagggatgtctcc
caacactggcgatacctgacggaagacactcaggaggaccttaatgccaagaagatggtg
gagaaacaagctatgttgatgcagagcaacactacaggtgtcagctctacatatgccaaa
gtccgcaaggtcctagtgcccatcagggaggatgagaagcacatgcaccacggagaaatc
ttctccaaaatcagacaggagaggggctttgaggccatctatgctggcgttagaacccga
gccatacagatggaagagcggaatgtctactgtggagtgtacaacgttctggtgctgctg
gacagggaagacccctccagggtggtgcactacagtggaggtcagctggtggccgtgggg
tccaaggaccgcgtggtgcgtctgctggacgtgctgacactgaaggaggtgtccccggtg
atccagggccatgccggctccatcagggccctgctgctctgtgaggagagaggactggtc
attagcgccagctacgacctcagcatcaggtgttggaatctgaaaacaggcgtatgcctt
atgctcttccgtggccacttgggtaccatcaactgcctggacctgcatgggaattgtcta
gtctcaggggccaatgattgcaaagtcaaagtgtggaacctgcagacagggcattgctat
gagaagctgaagtttaggcaccaccaccccatcctgtgtgtgaagatagacaaggctcta
gtgatgagcagctgtgacaaagggctggtcaaaatgtggggtatggagaccgcctcactc
ctcaaggtaatcgatgcccaccagagctctgtaaagtgtctgttcttcgaccagtggcac
atcctgtcaggtggttctgatggacaggtcatggcctggagcaccaactgtgacataaag
aagaacctgatgacctatcgccatccaaaggaggtcctggcgctgatctacctcttcctg
cgtgtcattaccggctgtgaggacgggaagatccgcatcttcaacttcctgacaggggac
tgcctgagagtcatcaaggctgggggtcaacacagccctatccagtccctgcacacacac
aacaacaatatggtggtgaacacggggaccagtgttctgatctaccagttcaccagggtg
cgctgggattactccgtgctggccgagagggagttctttaacgagttcaggggtactctt
aaaagcatgctcaataaagacaagtacccctactccaacgtgcgggctgagcgcatgaca
caggtgggctcgtccaatcgtaagatctacgaccgtgagggcaagaagccggagaggccc
gagctgtcccatcacacacgctctctgtcagcccccagcatgcgccgagcacaggctgcg
cagcaggagtctatgaggccggccacgtggagtgagcttcagggccaccgtaggagccgg
gcctacattgacctgcagccagagttcatcaccaagcccccctcggccatctctcctgga
agaccagtcagcggacacagccaggactcccaaagcagggccagtcacacgcccaggagc
gaaaccactggctcagccagggagctgtctgtgatgactaagtgggtgctgacgcgcagc
gagaaagcagtgaaagaccgagtgaagaagagggggccccatcggcccgtcacccctcag
catgtcctcctcaaggtcaactccacccaccagccgcagggaagcgaccaagccggggcc
aacatgaaactcaacgcccagatacgagatgcatggggctcccctccacctgtccagggg
gtggatccagagccccacgcctcaccattcccacctacaaccccaaaacagagcccccag
agtcagtcacagaaggccccagcaggacccagccaccaggtcttgcaacatggcatgaac
aagacctacgtcccccttatgacccgcactctggatctcaaactgaggcaatccctcgac
agccgtgaagtctgttccagcagtccctccccagctgtgatgcggcctcacaccagccac
gcagcttccacccagcgcacgccatgccccgagccagagaagaagaggccccagacctcc
tgtggtatagcgggtctggcggtgcgtaaggtgggggcattcactaccactgcccagtcg
aatgtccaggccccgcagcgcatgttcatgaaggtgagcagcaagcggccaggacgccac
gtggactttgagatgcccaataagaccattagccagtacaaccctctagacccattcagg
gagcgtggggccttcaggctccacacagacacccagttggaggagtacttcagggtccag
aaccaccaactgaatcagcagggggagggatgctataggaccaggaatgaccaggacaga
cagaggaagggggtctggaagatgaaggtcaaaggtgtccctgccttagacttccccaag
caggaccaggtgtatgcccctgagctgggccatgagatctacatctga
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