Salvelinus namaycush (lake trout): 120029413
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Entry
120029413 CDS
T07522
Symbol
sgca
Name
(RefSeq) alpha-sarcoglycan
KO
K12565
alpha-sarcoglycan
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
120029413 (sgca)
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Gene cluster
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Motif
Pfam:
Sarcoglycan_2
Sarcoglycan_2_C
Syndecan
Motif
Other DBs
NCBI-GeneID:
120029413
NCBI-ProteinID:
XP_038830558
UniProt:
A0A8U0PTK7
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Position
Sna35:15697037..15709708
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AA seq
391 aa
AA seq
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MYAVCVTSVLVVKADIKAYTPVGQLFVFELQRETFQNEFEPFLKHYGRVYNDPMLFKCNM
QSFPDLPGWLRFTQRHHYDNGFLYGTPLAQGKSMIEITVINKRSYDSFRDRLIITIDPPA
KRMPYQAEFFIPLREIEKVLPSTVQEEIRQDMMRMWKTDRLDFVNITSALDRGGRVPLPL
AGHYEGVYVKVGSDQYFSECLLRLQTAEHRRQCEAGGRAKIPGDCKVCSYPGNCVTWCKS
TLIDLSRPVIPPPAPTMGPGILDAGGVYDPPESPPPRDFLPDYIVTVIVPLALAIILCLL
LAYIMCCRREGVYRRDGKTPDIQLYHHHTIHGNTSELRSMAGCRGVPPPLSTLSMFNART
RETAPLFQTDSPSIPLILAQQEINTDTLPRK
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgtacgcagtgtgtgtgaccagtgtactggtggtcaaggcagacatcaaggcttatacc
cctgtgggacagctgtttgtgttcgagctgcagagagagaccttccagaatgaatttgaa
cccttcctgaaacactatgggcgggtctacaatgatcccatgctgtttaagtgcaatatg
cagtccttcccggacctgcctggctggcttcgatttacccagaggcaccactatgataac
ggcttcctctacggcaccccactggcccagggaaagagtatgatagagatcacagtgatt
aacaaacggagctatgactcattcagagacagactgatcataacgattgaccctccagca
aagagaatgccctaccaggctgagttcttcatcccactgagggagattgagaaggtgctg
ccctctacagttcaggaagagatcaggcaggatatgatgaggatgtggaagacagacagg
ctggactttgtcaatatcacgtctgcgttggaccgaggtggccgtgtccctctgcctctg
gctggacactacgaaggggtgtatgtgaaggtgggttcagaccagtacttctctgagtgc
ttgttgaggctccagactgctgaacataggagacagtgtgaggccgggggcagggccaag
atccctggggactgcaaggtctgctcctacccaggcaactgtgtcacctggtgcaagtcc
accctgattgatctgtccagaccagtgatcccccctcctgcccccaccatgggcccaggt
atcctggatgctgggggggtctatgaccctcctgagtccccccctcccagagacttcctg
ccagactacattgtgactgtgatcgtccccctggctctggccatcatcctgtgtctccta
ttggcatacatcatgtgctgcagacgagagggagtgtatagaagagatggaaagacacca
gatatccagctctaccaccaccacaccatccatggtaacaccagtgagctgcggagcatg
gctgggtgtcgtggggtccctcctcccctctccaccctttccatgttcaacgctcgcact
agggagacggccccactgttccagactgacagccccagcatccccctcatcctggcccag
caggaaatcaacactgacacactacccaggaaatga
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