Salvelinus namaycush (lake trout): 120029462 Help Entry 120029462         CDS       T07522                                  Symbol msh6 Name (RefSeq) DNA mismatch repair protein Msh6   KO K08737   DNA mismatch repair protein MSH6 Organism snh  Salvelinus namaycush (lake trout) Pathway snh03430   Mismatch repair Brite KEGG Orthology (KO) [BR:snh00001]  09120 Genetic Information Processing   09124 Replication and repair    03430 Mismatch repair     120029462 (msh6)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:snh03400]     120029462 (msh6) DNA repair and recombination proteins [BR:snh03400]  Eukaryotic type   SSBR (single strand breaks repair)    MMR (mismatch excision repair)     Mismatch and loop recognition factors      120029462 (msh6) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  MutS_V MutS_III MutS_I PWWP MutS_IV MutS_II Motif Other DBs NCBI-GeneID:  120029462 NCBI-ProteinID:  XP_038830619 UniProt:  A0A8U0TVD3 LinkDB All DBs Position Sna35:complement(13020891..13050101) Genome browser AA seq 1386 aa AA seqDB search MAKQSSIFNFFNKSPPPVLKAKPSPSPAEADLPSSVRKKNSSPKEEAKHASQTPTTKKTP AKPLNAKASKGGIGELFGNKTLTVKESPAPCPFSAGALVWAKLEGHPWWPCMVVPQPFGG QQMRGRGKSQRLHVHFFDEPPTRGWVSTKYIHEYQGSDSRDAKTGGVFFSGKPVIRRAKE LADAVMPDSPETRLKMPVCMVPSDAEEDEEEDMELDKSTLTDEDLTEEEDEETVKSKPSR CSSRATAEQGSKSKRRRIVVACDSEGSGEEFKPEQAACSSEEDEEEVVNSASEEDVESEC EAEPDSPVKPVKRKRPAEKPSSAKPKPKTPTLPETAKRAPLSSTITADTKSRLSGFSAPE SFDSQTNGSGAGGQGGATVWDHEKLDWLQEGRRKDAKRRRQSEEDYDPTTLYVPEDFLNK TTPGMRRWWQLKSETFDAVLFFKVGKFYELYHMDAVIGVNELGLTFMKGAWAHSGFPEIG FGRFSDGLVQRGYKVARVEQTETPDMMEARCKTMLKPTKFDRVVQREVCRIITRGTQTYS VLDGAPSETHSKYLLSIKEKAEEESSGHCRTYGVSFVDTSVGYFHVGQFQDDRHCSRLRT LLSHYAPAQVLFEKGNPSAETRKIFKASLSSAMQEGLTAGSQFWDAQKTLKTLAEEDYFK ESVRKDEESGSSVLPSVLKSMTSESDSLGLTPKEGYELALSALGGCMFYLKKCLVDQELL SMTNFQEYIPVDVEMEKAAGPTSFFSQTRQRMVLDGVTLANLEILQNVSGGTEGTLLERL DTCSTPFGKRLLKQWLCSPLCNPTSIGERLDALDDLMGVQAQATEVSDLLKKLPDLERLL SKIHSIGTPKGQDHPDSRAVLYEEVTYSKKKIADFLSALEGFKTMQEIVTILGPVAVDFR SRLLRQVVNLKDDGQEGLFPDLSAELKRWDTAFDHQKARATGVITPKAGFDPEFDQALSG IKACERDLQDYLDRQKKRLGCRNLTYWGTGRNRFQMEVPDSVSERNIPEEYKVKSTKKGW KRYWTREIERLFSELQSLEEKRDAALKDCMRRLFYNFDKNYRDWQTGVECMAVLDVLLSL TRYSQGGDGGPMARPQVLIPGDISQSAAFLDLRGSRHPCVTKTFFGDDFIPNDIAIGCPG GEEEGQEDKGHAPCVLVTGPNMGGKSTLMRQCGLVVVLAQLGCYVPAESLSFTPVDRVFT RLGASDRIMAGESTFFVELSETASILHHGTKHSLVLLDELGRGTATYDGTAIASAVVNEL AERICCRTLFSTHYHSLVEDYTNNPAVRLGHMACMVENEGDEDPSQETITFLYKFIAGAC PKSYGFNAARLANLPEDVIQSGHRKAKEFERSTISLRVFKKLCLYAEDPTAASTQFALLV RMISNL NT seq 4161 nt NT seq  +upstreamnt  +downstreamnt atggcgaagcaaagcagcattttcaattttttcaataagtctccgccaccggttctgaag gcgaaaccgagtccctcgcctgcagaagccgacttgccatcctcagttcgaaaaaagaac agctctccaaaagaagaagctaagcatgcatctcaaactcccaccaccaaaaagactcct gcaaaaccccttaatgcaaaagcgagcaaaggcggaatcggcgaactctttgggaataag acactaacagtaaaggagagtccagcaccatgtccattcagtgccggagccttggtgtgg gccaagctagaggggcacccctggtggccgtgtatggtagttccccagcctttcggcggg cagcagatgaggggcaggggtaaaagccagcgcctgcatgtccacttcttcgacgagcca ccaaccaggggctgggtcagcaccaaatatatccacgagtatcaaggctcggacagcaga gatgctaaaacaggaggggtgttcttcagtggtaagcctgtgatccgcagggccaaggag ctggctgatgctgttatgccagacagcccagagaccagactgaagatgcctgtctgtatg gtcccatctgatgctgaggaagacgaggaggaggatatggagcttgataagtcaacattg accgacgaagatttgactgaagaggaagatgaggagacagtgaagtcaaagcctagtcgc tgttcctcccgtgccacagcagaacagggcagcaagtccaagcgtcgccgcatcgttgtc gcctgcgacagtgaaggctcgggtgaggaattcaaaccagaacaggccgcatgcagcagt gaggaagatgaggaagaggtagtgaacagtgcatcggaggaagatgtagaaagtgaatgt gaggctgaacccgacagcccagttaaaccggtgaaacgcaaacgacccgcagagaagcca tccagtgccaaaccaaaacccaagactcccactcttccagaaaccgccaagagagccccc ttatctagcaccatcacagccgacaccaagtctcgactctcaggcttttcggccccggag agcttcgacagccagacgaatggctcaggtgccggcgggcaaggtggggctacggtatgg gaccatgagaagcttgattggctacaggaaggccggaggaaagacgccaagagacgaaga cagtctgaggaagactacgaccccacgactctgtatgtcccagaagacttcttgaacaaa acgaccccaggcatgcggcgctggtggcagctcaagtcggagacgttcgatgccgtactc ttcttcaaggtgggtaagttctatgagctgtaccacatggatgctgtgattggtgtcaac gagctgggtctgaccttcatgaagggggcctgggcccactctggcttccccgagataggc tttggacgcttctcagacggactggtgcagaggggatacaaggtggcacgtgtggagcag acggagactccagacatgatggaggctcgctgtaagaccatgctgaagcccaccaagttt gaccgggtggtacagcgtgaggtgtgccgaatcatcacacggggaacgcagacctacagc gtgttggacggagccccttctgagacacacagcaaatacctcctcagcatcaaggagaag gcagaggaggagagttcagggcactgcaggacctatggggtcagcttcgtggacacatct gtagggtacttccatgtgggccaattccaggatgaccgacactgctcccggctccgcacc ctgttgtctcactacgcccctgcacaggtgctctttgagaaagggaacccttcagccgaa acccgtaaaatcttcaaggcttctttgtcctcggctatgcaggaggggctgactgcaggc tcccagttctgggatgcacagaagaccctgaagaccctagctgaagaagactactttaag gagagtgtgaggaaggatgaggagtctgggagcagtgttctcccctctgtcctcaaatcc atgacgtctgagagcgattcgttgggtctgacccctaaggaggggtatgagttggccctg tcggccctgggaggctgtatgttctacctaaagaaatgtctggtagaccaggagctgctg tccatgaccaacttccaggaatatatcccagtggacgtggagatggagaaggcagccggg ccgaccagtttcttctcccagacccgtcagcgtatggtcctggatggggtgaccctagcc aacctagagatcctgcagaatgtgtcggggggtacagaggggaccttgttggaacgcctg gatacctgtagtactccatttggtaaaaggttgctgaagcagtggctctgttccccgctc tgtaaccccacatccataggggaacgtctggatgccctggatgacctgatgggagtgcag gcccaggctacggaggtctcagacctgctcaagaagctccctgatctggagaggctcctt agtaagatccacagcatcggtactccgaagggtcaggaccacccggacagcagggctgtt ctgtatgaagaggtcacctacagtaagaaaaagattgcggacttcctctctgctctggag ggcttcaagaccatgcaggagattgtgaccatactaggaccggtcgcggtcgacttccgg tccaggctgctgcgccaggtggtcaacctgaaggatgacggtcaggagggcctcttccct gacctgtcggccgagctgaaacgctgggacacagccttcgaccaccagaaggcccgcgcc accggagtcatcacccctaaggctggctttgacccagagtttgaccaggctctcagtggc atcaaggcctgtgagagggacctacaggactacctggacaggcagaagaagaggctgggc tgcaggaacctgacctactgggggacgggacggaaccgctttcagatggaagtaccagac agtgtctcggagaggaacattcctgaggagtacaaggtgaagtccactaagaagggctgg aaacgctactggaccagggagatagagcgtctgttctcagagctccagagtcttgaggag aagagagacgcagctctgaaggactgcatgagaagactcttctacaactttgacaagaac tacagggactggcagactggggtggagtgcatggctgtgctagatgtgttactgagtctg acacggtacagccagggaggagatggaggaccaatggcacggcctcaagtactaattcct ggtgacatcagccaatcagcagccttcctggacctgaggggctcccgccacccctgtgtc accaaaaccttcttcggtgatgacttcatccctaatgacattgctattggctgccctggc ggcgaggaggagggccaggaggataaaggacatgcaccctgcgtgctggtcactgggcct aacatgggaggaaagtcgactcttatgagacagtgtggtctggtggtggtcttggcccag ttgggttgctatgttcctgctgagagcctgtcctttacccctgtggacagagtcttcaca cgcttgggagcatcggaccgtatcatggctggggagagcaccttctttgtagagctcagt gagactgctagtatcctccaccatgggaccaagcactccctggtgctgctggatgaactg ggaaggggcacagccacatatgacggcacagcgatagccagtgctgtggtgaacgagctg gcggaaaggatatgctgtcggaccctcttctccacacattaccactccttagtagaagac tacaccaacaaccctgctgtacggctcggacacatggcctgtatggtggagaatgaggga gatgaggaccctagtcaggagaccatcaccttcctctacaagtttatcgcgggagcatgt cctaaaagctacggtttcaacgctgctcgcctcgccaacctgcctgaggatgttattcaa tcaggccacaggaaggccaaggagtttgagaggagcaccatttccctacgagtcttcaag aagctgtgcttgtatgctgaagaccccacagcagccagcacacagtttgccttgctcgtc cggatgatcagcaacctgtga

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