Salvelinus namaycush (lake trout): 120029465
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Entry
120029465 CDS
T07522
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A-like
KO
K03267
peptide chain release factor subunit 3
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
120029465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
snh03019
]
120029465
03012 Translation factors [BR:
snh03012
]
120029465
Messenger RNA biogenesis [BR:
snh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
120029465
Translation factors [BR:
snh03012
]
Eukaryotic type
Release factors
120029465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
PAM2
Motif
Other DBs
NCBI-GeneID:
120029465
NCBI-ProteinID:
XP_038830623
UniProt:
A0A8U0PSP9
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Position
Sna35:complement(20690550..20701973)
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AA seq
585 aa
AA seq
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MDPRDTAPDSWEQEEDVKARAAAGLQSALAALNVNAKPFIPNVDAAVFVPTFLQSSPTEI
SNSDGHGAEPVASMEVLETVAPVENGGGTEADVVVEVETWEQKEEPGEGEPGGGALGGEG
GSSEEAQGREEVEMMEEEEEEELPVLKVIPLPPNAPKKEHVNVVFIGHVDAGKSTIGGQI
MYLTGMVEKRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKHF
TILDAPGHKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKH
LIILVNKMDDPTVNWSLERYEECKEKLVPFLKKVGFNPKKDIYFMPCSGLTGANLKDPIE
ECTWYTGLPFIPHLDSLPSFNRITDGPVRLPIVDKYKDMGTVILGKLESGSIAKAQQLVM
MPNRHTVEVLSLLSDEVETDEAVPGENLKLRLKGIEEEEILPGFILCNAENLCHSGRTFD
AQIVIIEHKSIICPGYNAVLHIHTCIEEVQITALICLVDKKTGEKSKTRPRFVKQDQVCI
ARLRCAGTICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVPEKD
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atggacccgcgagacacagcaccggattcgtgggagcaggaggaggatgtcaaggcccga
gctgccgcggggctccagtccgctctcgccgctctcaacgtcaatgccaagccatttatc
ccgaatgtcgacgcggcggtgtttgtgccgactttccttcaaagtagccctacggaaatc
tcaaattccgacggtcacggtgctgagccagttgccagcatggaggttttagaaacagtt
gctccggtggagaacggaggagggacagaagcagacgtggtggtggaggtagagacgtgg
gagcagaaagaggagcccggggaaggagaaccaggagggggagccctgggaggagaggga
ggttccagtgaagaggcacagggaagggaggaagtggagatgatggaggaggaagaagag
gaggagttgcccgtgctaaaagtaatcccgctcccaccaaatgccccgaagaaggagcat
gtcaatgtggtgttcatcggtcatgtggatgctggtaaatcaactattggaggacagatc
atgtatttgacaggtatggtggagaaaagaaccctggagaaatatgaaagagaagcaaaa
gaaaaaaacagagaaacatggtacctgtcctgggccctggacactaaccaggaggagaga
gacaagggaaagacggtggaggtggggagagcctactttgagacagagaaaaagcacttt
actatcctggatgctcccggccacaaaagctttgtccccaacatgattggtggggcatca
caggctgacttggcagtgcttgtgatctcggccagaaaaggagagtttgagacaggcttt
gagaagggaggccagacgcgggagcacgccatgctggccaagacggctggagtcaagcac
ctcatcatcctcgtcaacaagatggatgaccccaccgtcaactggagcttggaaaggtat
gaggaatgtaaagagaaattagtgccatttctgaagaaggtgggcttcaacccaaaaaag
gacatctacttcatgccttgctctgggctaacaggagccaacttgaaggaccccatagag
gagtgcacgtggtacacggggttgccattcatcccacacctagacagcctgccaagcttc
aacagaatcacagacggccccgtcagattacccatcgtagacaaatacaaggatatgggc
acggtgatcctggggaagctggagtctggctccattgccaaagcccagcagctggtcatg
atgcctaacaggcacacagtggaggtgctgagcctgctgtctgatgaggtggagacagat
gaagctgttcctggagagaacctgaagctaaggctgaagggcatcgaggaagaggagatt
ctgcctggcttcatcctctgtaacgctgagaacctctgccactccggacgcacctttgat
gcccagatcgtcatcattgagcataaatccataatctgcccaggttacaacgcagtccta
cacatccacacctgtattgaagaagtacaaatcacagccttaatctgtcttgtggacaag
aagacaggtgagaagagcaagacgcgacctcgctttgtcaaacaggaccaggtgtgcatc
gcccggcttcggtgtgccggaaccatctgcctcgagaccttcaaagacttcccacagatg
gggaggttcaccctacgagatgaaggcaaaaccattgctattggcaaagtgctgaagctg
gtaccagagaaggactaa
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