Salvelinus namaycush (lake trout): 120029474
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Entry
120029474 CDS
T07522
Name
(RefSeq) leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1
KO
K24491
leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
snh04990
]
120029474
Domain-containing proteins not elsewhere classified [BR:
snh04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
120029474
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Ortholog
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GFIT
Motif
Pfam:
LRR_8
I-set
LRR_4
Ig_3
LRR_1
ig
fn3
Ig_2
Ig_VEGFR-1-like_5th
LRR_14
LRR_EndoS
LRRNT
Motif
Other DBs
NCBI-GeneID:
120029474
NCBI-ProteinID:
XP_038830634
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All DBs
Position
35:1376857..1381157
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AA seq
659 aa
AA seq
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MFRGFSLGFCLALFCFGPFVCSACPSQCNCFFHKLSDGSKARSVLCNDPQITLVPPNFPA
DTSKLRIEKTAITKISGETFHYLNSLEFLRVSFNSLNSLNVDSFRGLRSLDELRLEGNAL
TSFPWESLTDMPDLRLLDLHNNKISSIPAEATIYIKNLTYLDLSSNSLATVPPEVLSMWL
SVKPSQEDGDSSKYILGLHDNPWLCDCRLYDLVQFQKSPSSSVVLIDTKLRCADPESLSG
VQFSETELQRCQGPRVHTAVARVRSSLGNNVLLRCGTIGVPVPELSWTRADGKQMNGTVQ
EEVSKEGIIWSILSVPAVSYRDSGKYMCKATNFVGTADAIISLVITDSFKNEEQGGSSKT
RNQRGRKTGGFGKAAYQEKLVARYVPPLTTTAATPIIEPLGPSGFTGKYDIESYSISDSV
ADGQTPGPPAMEPAIKEVEKEVLSNLAANASSLQAPAPPEKRVVRSVKVIGDTDHTVSLN
WRSPTAKNTTEFSVLYAVFGERDMRRINVDVGKNRITIDGLVPRTKYIACVCVKGLIPKK
EQCVIFSTDEAASASGTQKLINVVVITVACVIAVPLTLIVCCGALKKRCKKLLGRKSKDI
QDSYVTFETLSPGQKPKGMEGEYLARQQPGESNRLLSARSSVDSEATCRNEGPPNEYFC
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgtttcgaggttttagtctgggtttctgtttggcattattttgcttcggaccgtttgtt
tgcagcgcgtgtccgtctcaatgtaactgcttctttcacaaattatcagatggatccaaa
gcaaggagcgtactttgcaatgacccacagattaccctggtcccacccaacttccctgca
gacacctcgaaactgcggatcgagaagactgccatcacaaagatctccggcgaaaccttt
cactacctcaacagtttggaatttctccgagtgtctttcaattctctgaactctttgaat
gtagacagcttccgtggcctgagaagtctggatgagctgagactggaagggaacgctctc
acctcgttcccctgggaatctctgactgatatgcccgacctgaggctactggacctgcat
aataataagatatcgtcgatcccggccgaggcgaccatttatatcaagaacctgacctac
ctggacttatctagcaacagcctagccacggttcctcctgaggttctctctatgtggtta
tctgtgaaaccgtctcaagaagatggggacagttccaaatacattctaggtctccatgac
aacccatggctatgtgactgccggctctatgacctggtccagttccagaagtctccgtcg
tcctctgtggttctgatcgacaccaagctgcgctgtgctgatccggagagcctgtcgggg
gtgcagttcagcgagacggagctccagaggtgccaggggccccgtgtccacacggctgtg
gcccgggtcaggagctccctggggaacaacgtcctgctacgctgtgggaccatcggagtc
ccagtaccagagctgtcctggactcgggcagacggcaaacagatgaacggcactgttcag
gaagaagtttcaaaggagggaatcatttggtccatcctgagtgtgcctgccgtctcttac
cgggactctggaaaatacatgtgcaaagccaccaacttcgtggggactgcagatgccatc
atctccctggttattacagactcctttaaaaatgaggaacaaggtggcagctccaagact
agaaaccaaagaggacggaaaaccggtgggtttgggaaagctgcctaccaggagaaactt
gttgccagatacgtacctccactaaccaccacggcagccacgcccatcatcgagccacta
ggtccgagtggtttcacagggaagtatgatatcgagagctacagtatttcggacagtgtg
gccgatggacagacacccggtcctcctgccatggagccggcgattaaggaagtggagaag
gaggttcttagcaacctggcagccaacgcctcttctttgcaggcaccggcgccgccggag
aaacgggtggtacgatcggtgaaggtcatcggggacaccgatcacaccgtatccctgaac
tggcggtccccgacggccaagaacaccaccgagttcagcgtcctgtacgccgtgttcggc
gagagggacatgcggaggatcaacgtagacgtgggaaagaaccgtatcaccatcgacggc
cttgtgccaaggacaaagtacatcgcctgcgtctgcgtcaaaggcctgatccctaagaaa
gagcagtgtgtaatcttttcaacggacgaggcggccagcgcaagcggcacccagaaactc
attaacgtggtggtgatcaccgtggcctgcgtgatcgctgtccccctgacactgatcgtc
tgctgcggggcactcaagaagcgctgtaaaaagctactggggaggaaatccaaagatatt
caagactcatacgtaacattcgagaccctctccccgggacagaagcctaaggggatggag
ggggagtaccttgccaggcaacagccaggcgagtccaacagactgctctctgctaggtcc
agtgtggactctgaggctacttgtaggaatgagggaccccctaatgagtacttttgttga
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