Salvelinus namaycush (lake trout): 120029518
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Entry
120029518 CDS
T07522
Name
(RefSeq) LLGL scribble cell polarity complex component 2-like isoform X1
KO
K06094
lethal(2) giant larvae protein
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
120029518
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120029518
Membrane trafficking [BR:
snh04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
120029518
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
Beta-prop_EML_2
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
PLN_propep
Motif
Other DBs
NCBI-GeneID:
120029518
NCBI-ProteinID:
XP_038830701
UniProt:
A0A8U0TWS0
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Position
Sna35:24377678..24404797
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AA seq
1010 aa
AA seq
DB search
MKRFRRHGQESQRERIKQELYGFNKTVEHGFPHQPSALGFSPSLQLLAIGTRSGAIKLYG
GPGVEFMGLHDENAAVTQVHFLPHQVELVTLLDDNSLHMWTLRAHHGVSELLEIGRFTLS
GPPGAPPSVTHVTAVLAHSSGDLLLLGTEGGHVFVVKVPGFRELEERNISLEKVTNSVPE
DYGGRRSLEHVESLQENPVNPRQVLIGYGRGLMVIWDLDSQSAVKHIPATQQLESVWWTE
DGGHVLSSHSDGSYCRWKVAGDDPQSEQEKSEVPYGHFPCKAISKIIQLPTEQGPPFLFL
SGGMPRASYGDRHCISVIHSKTHVALDFTSRIIDFFVIRDGPDHTGEPSALVVLVEEELV
VIDLQTEGWPVIQTPYLVPLHCSAITCSHHVSAIPLKLWERVLSAGALQNTHYSKKPWPM
TGGQNLAPDPPQRDLLLTGHEDGTVRFWDASGVCLYPMYKLSTAGVFLTDSDPNDNLNQG
TEGEWPPFRKVGCFDPYSDDPRLGIQKIHLCKYSGYLTVAGTAGQILVLELNDEAAEQTV
EATVADLLQGQEGFRWKGHTRLEVREEPVTFPPGFQPFALVQCQPPAVVTALTLHSEWKL
VTFGTSHGFGLYDYQQKNNVLVRCTLNPSDQLAMEGPLSRVKSIKKSLRQSFRRIRRSRV
SLRKHHVNNAAKLQQANARLEAELAEMELAPVQRKIEPRSPDDSFTGLVRTLYFADTFLS
DSSHNTPSLWAGTNGGSVFAYQLRLPPVERRGEDPVTAHPAKEIQLMHRAPVVGILVLDG
HGSPLPEPLEVAHDLARSPDMQGSHSLLVISEEQFKVFTLPKVSAKTKLKLTAIDGSRVR
RVGVAWFGSTRTDDYGESGLTVLTNQGDLHVVSLPGVKLQVQYPCIRREDVSGIASCVFT
KHGQGFYLISPSEFERFSLSARCVVEPRSLVEVSSQTPSTTLPRAPPDGASVERRNSTRD
GVESSRRVMEHALLNDETVLQEIQKSLEVDQTTFLENGTSALAGGKVLSN
NT seq
3033 nt
NT seq
+upstream
nt +downstream
nt
atgaagaggtttaggagacatggccaagagtcccagagagagcggatcaaacaggagctc
tacgggttcaacaagacagtggagcatggttttcctcaccaacccagtgctctgggcttc
agccccagtctacagctcctggccatcggcacacgctccggagccatcaaactttacggt
ggtccaggtgtagagttcatgggtctacatgatgagaacgctgccgtcacacaggtccac
ttcctgccacaccaggtggagctggtgactctgttggatgacaacagtctccacatgtgg
accctcagagcccaccatggtgtctctgagctgctggagataggacgcttcacactctct
ggacccccgggtgctccccccagtgtaactcatgtaacagcggtgctagcccactcttct
ggggacctgttgttgctaggaacagagggaggacacgtgtttgtagtgaaggtaccaggc
ttcagagaactagaggagaggaacatcagcctggagaaagtcaccaacagtgtaccagag
gattacggaggtcgtaggagcctggagcatgtcgagtccttacaggagaatcccgtcaac
ccacgccaggttctgattggctacggacgaggcctcatggtcatctgggacctggacagc
caatcagctgtcaaacacatccccgctacacagcaactggagagcgtgtggtggacggag
gacggtggccatgttctcagttcccatagcgacggcagctactgccgctggaaggtggct
ggggatgacccacagagcgagcaggagaagtctgaagtaccgtatggccacttcccctgt
aaagccatctctaaaatcatccagctgccgacagaacaggggcctccgttcctgttcctc
agtggcggcatgccccgggccagctacggcgacagacactgtatcagtgtgatccacagt
aaaacacacgtggctctggacttcacctccagaatcatcgacttctttgtcatcagagac
ggaccagaccatacaggcgaacccagtgcgttggtggtcttagtagaagaggagttggta
gtgatagatcttcagactgaagggtggccagtcatccagactccatacctggtgcctctc
cactgctctgccatcacctgctcccaccatgtctctgctatacccctgaagctgtgggag
agggtcctgtctgccggggcactgcagaacacacactactctaagaagccgtggcctatg
acaggaggacagaacctggccccagacccccctcagagagacttactgctcacagggcac
gaggacggtacggtgcgtttctgggacgcgtcgggggtgtgtctgtaccccatgtacaag
ctgagcacagcaggggtgttcctcactgactcagaccccaatgacaacctgaaccagggc
acagagggagagtggccacctttcagaaaggtgggttgttttgacccgtacagtgacgac
cctcgtctcggcattcagaaaatccacctgtgtaaatacagcggctacctgactgtagct
ggcactgctggacagatcctggtgttagagctgaatgatgaggcagcagaacagactgtg
gaggccaccgtagcagacctgcttcagggacaggagggcttccgctggaagggccacacg
cgtctggaggtgagggaggagccggtgacgttccccccaggtttccagccctttgccctg
gtccagtgccagcctccggccgtggtcactgccctcaccctgcactctgagtggaaacta
gtaacattcgggaccagccacggcttcggactctacgactaccagcagaaaaacaacgtt
ctcgtcaggtgtactctgaaccccagtgaccagctggctatggaaggtcctctgtccaga
gtgaagagcattaagaagtctctccgccagtccttcagaaggataaggcgcagccgtgtg
tccctacgcaaacaccatgtcaacaacgcagctaagttgcagcaggccaatgctcgtcta
gaggcggagctagctgagatggagttggcgcccgtccagagaaaaatagagcctcgatcc
cctgacgactccttcaccggcctcgtgcgcacgctatacttcgctgataccttcctttca
gacagctcccacaacacaccctctctgtgggcagggaccaatgggggatcagtattcgcc
taccagctccgcctaccgcctgtggaacgcagaggagaggaccctgtcacagcacaccct
gctaaggagatccagttgatgcaccgggctccagtagtgggcatcttggtgttggacggc
catggttcccctctgcctgagcccctggaggtggcacacgacctggctcgctcacctgac
atgcagggttcacacagcctactggtcatatcagaggaacagttcaaggtgttcaccctg
cctaaggtgagcgccaaaacgaagttgaagctgacggccattgacggctcacgcgtgcgc
cgggtgggcgtggcctggttcggcagcacccgtacggatgactacggcgagagcggcctc
accgtcctgaccaatcagggagacctccacgtggtgtcgttgccgggggtgaaattacag
gtccagtacccctgtatacgtagggaggacgtcagcggcattgcatcctgcgtcttcacc
aagcatggacaaggtttctacctgatctctccgtcagagtttgagcgtttctctctgtct
gctcgctgtgtggtggagccccggtctctagtggaggtgtcctctcagacacccagcacc
actctgccacgggcgccgccggacggggcctctgtggagcgcagaaattctacgagggat
ggcgtggagagctctagacgtgtgatggagcatgctttgctgaatgacgagactgtgctt
caggagatccagaaatctctagaagtagatcagacgacattcctggagaatgggacgagt
gctctcgctggagggaaggtgctgagcaattga
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