Salvelinus namaycush (lake trout): 120029769
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Entry
120029769 CDS
T07522
Symbol
vps35l
Name
(RefSeq) VPS35 endosomal protein-sorting factor-like
KO
K25731
VPS35 endosomal protein-sorting factor-like
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120029769 (vps35l)
Membrane trafficking [BR:
snh04131
]
Protein recycling
Others
Retriever complex
120029769 (vps35l)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
Motif
Other DBs
NCBI-GeneID:
120029769
NCBI-ProteinID:
XP_038830969
UniProt:
A0A8U0TX92
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Position
Sna35:complement(29746214..29760090)
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AA seq
968 aa
AA seq
DB search
MAAVQWHSRARRYESELQSCGLEVAPVEFSDYHPLKSITVTDSKSRRGARKGSTSSSSSS
SSSVAPDPLSSMLDGTDPLSMFAAASASESPLTLSQSSSTGDVGRGKRREKEDEVGVDFE
PWSSKRGEILARFTTTEKLSINLFMGSDKGKAPSLASSAVSEKVRTRLEELDDLEEGSQR
ELLNLSQQDYVNRIEELNQSLKEAWASDQKVKALKIVIQCSKLLSDTAVIQFYPSKFVLI
TDILDTFGRLVYERIWSMCSDPRPIPDSFTADEVNDTAKETCLNWFFKIASIRELIPRLY
VEVALLKCNRFLTKCGIQETVPRLTAMIRGIGDPLVAVYARAYLCRIGMEVAPHLKDSLN
KNFFDLLGTFRQIHGDSVQNQLVLQRVEIPVYLTLYSPAIHWILQCVSYRAPEALLTEMM
ERCKKLGNNALLLNSVMWAFRAEFIATRATDFIGMIKDCDEAGFPKHLLFGSLGRSLACA
DPPEAERLPILNEAWKVITKVRSPQDYINCAEIWVEFTCRHFTKREVNTVLSDIIKHMTP
DRAFEDAYPQLQSVIKKILTYFHDFSVLFSMERFLPFMDMFQKDSVRVEVCRSIMDVFIK
HQQEPTRDPVILNALLHVCKTMHDSVNALTLEDEKRSLALLINGFIRMVSFGRDFEQQLS
FCVEARATFCNLEPVLVQLIHTVNQLAMETRRVMRGSHSRKTAAFVRACAAYSFITIPSL
TSIFSRLNLYLLSGQVALANQCLSQADAFLKAAVSVLPEVPRSISIEGKLRSSEGFLLDF
INNFLSALLVVPDHPEAGVLFLVRGLLNMVQDYTWEDNSDAKVQVYISALPLLAAMSQES
YLYSIPKVDSNETLYGGDPKFLAEINKLCETLIGQVLDHLKTLGRDESVHRQGCLAFSLF
GCLLAHGDLRNNKLNQLAVNLWNLSHKQGYCNTRTSVRTLEFIKHQAQQPDMAHLSDMIQ
RLTLQSRT
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgtgcagtggcactctcgtgcacgcaggtatgagtctgaactgcagagctgt
ggcctggaggtcgccccagtggagtttagcgactaccatcccctcaagtccatcactgtg
acagactccaagtcgcggaggggagcgcgtaaaggcagcacatcctcctcttcctcctct
tccagctccgtggcaccagatcccctgagctccatgctggatggaacggaccccctgtcc
atgtttgctgcagcctctgccagcgagtcccccctaaccctctcacagagcagctccact
ggggacgtgggtagaggaaagaggagggagaaggaggatgaggttggagtggacttcgaa
ccgtggtcatccaaacggggagaaatccttgccaggttcactaccacggagaagctctcc
attaatctcttcatgggctcagataaaggcaaggctcccagtcttgcctcctctgctgta
tcggagaaggtgcgaactcgcctagaggagctggatgacctggaagaggggtctcagcgg
gagctgctgaatctgtcccagcaggactatgtgaaccgtatcgaggagctcaaccagtct
ctaaaagaggcctgggcctccgaccagaaggtcaaggccctcaagatcgtcatccagtgc
tccaagctgctgtcagacacagctgtgattcagttctacccaagcaagtttgtcctcatc
acagacattctggacacctttggacgtctggtgtatgagaggatctggtccatgtgttct
gaccctcgccccataccagactcctttacagctgatgaagtgaatgacacggccaaggag
acctgcctcaactggttcttcaaaattgcctccatcagagaactcatcccacgactatat
gtagaggtagctctcctgaagtgtaaccgtttcttgaccaagtgtgggatccaggagacg
gtgcctcgcctcacagctatgatccgggggataggggaccccctggtggccgtgtatgcc
cgggcctacctctgtaggattgggatggaggtggctcctcacctgaaggacagcctgaac
aagaacttctttgacctgctggggacgttccgtcagatccacggcgacagtgtccagaac
cagctggtcctgcagagggtggagatccccgtctacctgaccctctactcccccgccatc
cactggatcctgcagtgtgtctcctacagagcaccagaggccctgctaacagagatgatg
gagaggtgcaaaaagcttgggaataatgccctgctgctgaactcggtgatgtgggcgttc
agggcggagtttatcgcgacgagagccaccgacttcatcggcatgatcaaggactgcgat
gaggcaggattccctaagcacctgttgtttggctctctgggccgcagtctggcctgtgct
gaccctcctgaggcagaaaggctgcccatcctcaatgaggcctggaaggtcatcaccaaa
gtgcgaagtccacaggattacatcaactgtgctgagatctgggtggagttcacctgtcgt
cacttcactaaacgtgaggtcaacactgtgctctctgacatcatcaagcacatgacccca
gaccgggcctttgaggatgcctatcctcagcttcagtccgtgataaagaagatcctcacc
tactttcatgacttctctgtcctcttctccatggagcgtttccttcccttcatggacatg
ttccagaaggacagcgtcagggtggaggtgtgtcgctccatcatggacgtcttcatcaaa
caccagcaggagcccactagagatcctgtcatcctcaatgctctactccacgtctgcaag
accatgcacgactctgtcaatgctctgacgctggaggacgagaagagatctctggcctta
ttgatcaatggcttcatacgcatggtgtcgtttggccgtgactttgagcagcagctgagt
ttctgtgtggaggcccgggccaccttctgtaacctggagccagtgctggtgcagctcatc
cacactgtgaaccagctggccatggagacgaggcgtgtgatgagggggagccactcccgc
aagactgctgcttttgtcagggcatgtgctgcatacagcttcatcaccattccctccctc
accagcatcttcagccgcctcaacctctacctgctgtctgggcaggtggccctggccaac
cagtgtctttcccaggcggatgcattcctgaaggcagcggtcagtgtgttgccagaggtg
ccacgcagtatcagtatcgagggcaaactgcgctcttctgagggcttcctgcttgacttc
atcaacaacttcctgtcagcactactagttgtgccggaccacccagaggcaggggtgttg
ttccttgtgcgtgggctgctcaacatggtgcaggactacacctgggaggacaacagtgac
gccaaggtccaagtctacatcagcgccctgccactactggctgccatgagtcaggagagc
tacctctattccatccccaaagtggactcgaatgaaaccctttatggaggagatcccaag
tttttggcagagatcaacaagttatgtgaaactctgattggacaagtgttggaccacctc
aagaccttgggtagagatgagagtgttcatagacagggttgtctggccttctctctgttt
ggctgcctcctagctcatggggacctacgcaacaacaaactcaaccagctggctgtcaac
ctgtggaatctgagccacaagcagggttactgcaacacacgcacctctgtgcggacacta
gagttcatcaagcaccaggcccagcagcccgacatggctcacctttcagacatgattcaa
cgcctcaccttgcagtccaggacctga
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