KEGG   Salvelinus namaycush (lake trout): 120029849
Entry
120029849         CDS       T07522                                 
Symbol
itga9
Name
(RefSeq) integrin alpha-9
  KO
K06585  integrin alpha 9
Organism
snh  Salvelinus namaycush (lake trout)
Pathway
snh04510  Focal adhesion
snh04512  ECM-receptor interaction
snh04514  Cell adhesion molecules
snh04810  Regulation of actin cytoskeleton
snh04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:snh00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    120029849 (itga9)
   04514 Cell adhesion molecules
    120029849 (itga9)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    120029849 (itga9)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    120029849 (itga9)
   04810 Regulation of actin cytoskeleton
    120029849 (itga9)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:snh04515]
    120029849 (itga9)
Cell adhesion molecules [BR:snh04515]
 Integrins
  Integrin alpha subunits
   120029849 (itga9)
SSDB
Motif
Pfam: Integrin_A_Ig_1 Integrin_A_Ig_2 Integrin_A_Ig_3 FG-GAP FG-GAP_3 FG-GAP_2 Integrin_alpha
Other DBs
NCBI-GeneID: 120029849
NCBI-ProteinID: XP_038831084
UniProt: A0A8U0TVU2
LinkDB
Position
Sna35:13342451..13468447
AA seq 1030 aa
MRKRMAHFQNQKRSLLNVLYVYLSVSVVHSYNIDLEHPIVFRGPDSSFFGYSVLEHYHDN
TRWVLVGAPKANSSHSSSVHTPGAVFKCRVHSNPERRCTEMDLGRGNKPRESCGKTCQGD
RDDEWMGVSLARQDKSNGKILACAHRWKNVYYDSELILPHGYCSIIPPTLQGRTQALIPC
YEDYKQKYGEEHGSCQAGIAGVFTEELVVMGAPGSYYWTGTVKVYNLTSNTFYNPNKEEV
DSHRYSYLGYAVTAGHFSSPNFIDVAAGAPQHSGGGKVYIFRIDGGSLVKIFQASGKMMG
SYFGSSLCAVDLNRDGLSDLLVGAPMHSTLRDEGQVSVYLSKGNGVMEQAELLNGDDAYN
AHFGECITAIGDIDDDGYQDVAIGAPKEDDYGGAVYIYHGDATGIVNKYSMRLSGRSVNP
AFQMFGQSISGNVDMDGNGYLDITIGAFMADSVVLLRSRPVITVDVSIYLPVSINISVPQ
CHEGPQHLNCFNATVCLLFRGKHLPGQIELLYNLTADVDKRQRSQPSRVYLVQNGAQMSS
VSNKLSLNINTVECQQYTAYVKKDVKDVFTAITFEVAYTLGKHVMDGHLDNDLPALTPVL
RWKKGDKIAAKNETWFEKNCLSDDCAADLRLHGKLLLSGLHVHPHLALGGVRNVSLNVTI
SNAGDDAYDTNIYFTFSREVFYINYWQREEKGISCGLVDLDFLKCSVGFPFMRAQTKYHL
AVIFDTSRLSGENETLQFVVHAKSANPEHKLLDNTLDLSIPLVHEVDTTITGVVNPTSFE
YGNSIAASRFVQLEDMECNFQPLNFTFQVINNGPSRLPGSIVDIRIPNRLAGNGADMFLI
MDSQVAEGRGNCTPHRNPQPCTIPQDRENIFHTIFAFFTKSGRRVLDCDRPGRACLTISC
TLGSQTKEDAISIDVKLLLNTEILNRDSSSLIQFVTRGNVRVDGRAMEVPEGLSEDTSLV
FEALHSQEPRGYVVGWIIAISLLVGILIFLLLAVLLWKMGFFRRRYREIIEAEKNRKDSD
ESWDWVEKNH
NT seq 3093 nt   +upstreamnt  +downstreamnt
atgcgcaaaaggatggcccattttcagaatcagaagaggagccttttgaatgtgctctac
gtgtatttgtctgtttctgtagttcactcctacaacattgacttagaacatcctattgtg
ttccgtggacctgactcgagtttctttggatattctgttctggagcactaccatgacaat
acgcgctgggtgctggtaggggccccaaaggccaactcttcccacagcagctctgttcac
acccctggagccgtgttcaagtgccgtgtccacagcaacccagagagacgctgcactgag
atggacctaggcagagggaacaagcccagggagtcttgtgggaagacgtgccagggagac
agggatgatgagtggatgggggtcagcctcgcccggcaggacaaatccaatggaaaaata
ctggcctgtgcccaccgttggaagaacgtctactatgactctgagctcatccttccccat
ggttactgttccatcatccctcctacgctacagggccggacccaagccctgatcccctgc
tatgaagactataagcagaagtatggggaagagcacggctcgtgccaagcggggatagcg
ggcgtttttactgaggagctggtggtgatgggagctccaggatcatactactggacagga
acagtcaaggtctacaacctgacctccaacaccttctacaaccccaacaaagaagaagtc
gactcacacagatacagctatctaggctatgctgtgactgctggacacttctcctctcct
aacttcatagatgtggctgcaggagctccacaacacagtggaggaggaaaagtttacatt
ttcagaatagatggtgggtctttggtgaagatctttcaagcctcagggaaaatgatgggc
tcttactttggctcctcattgtgtgcagttgacctgaaccgggacggcctgtcggacctg
ctggttggagcgcccatgcacagcacgctacgggacgagggacaggtctctgtctacctc
agcaagggcaatggggtgatggagcaggctgaactcttaaatggagatgatgcctacaat
gcacacttcggagagtgcatcactgcaatcggagacatcgatgatgatgggtaccaagat
gtggccataggagcacccaaagaggatgactacggtggagcagtctacatttaccatggc
gatgccacaggaattgtcaacaaatattctatgaggctgtctggacggagtgtaaacccc
gccttccagatgttcggccaatcaatatctggcaatgtggacatggacggcaatggatat
ctagatattaccattggtgcttttatggctgatagtgtggtgttattgaggtcccgaccg
gtgatcactgtggacgtgtccatctacctgcctgtctccatcaacatctctgttcctcag
tgtcacgagggaccacagcacctcaactgtttcaacgctacagtctgcctgctcttcaga
ggaaaacacctgcctggacagatagagttgctgtataacctgacagctgatgtggataag
agacagaggagccagccttctagagtgtacttggttcagaacggagcccagatgagctct
gtgagcaacaagctcagtctgaacatcaacacagtggagtgccaacaatacactgcatac
gttaagaaggacgtgaaagacgtgttcacagccatcacctttgaagtggcctacaccctg
gggaagcatgtgatggatggacatcttgacaatgacctgcctgctctcacacctgtactg
cgctggaagaaaggagacaagatagcagcaaagaatgagacatggtttgagaagaactgc
ctgtctgatgactgtgctgctgacctgagactccatgggaaactgctgctttctgggctc
catgtccatccccaccttgccctaggaggagtgaggaacgtctctctgaacgtgaccatc
tccaacgcaggggacgatgcctacgacaccaacatctacttcaccttctccagagaggtc
ttctatatcaactactggcagagggaagagaagggtatttcctgtggtcttgttgattta
gacttcctcaaatgcagcgtgggatttcccttcatgagagcacagactaagtatcatctt
gcagtgatcttcgacacaagccggctttcaggggaaaatgagacattgcagtttgtagtt
catgcaaaaagtgccaaccctgaacataaactgttggacaacaccttggatctatctatc
ccactggtccatgaggtagacacaactatcactggtgtggtgaacccaacgtcctttgag
tatgggaactccatcgctgcctctcgcttcgtccagctggaggacatggagtgtaacttc
cagccactcaactttacctttcaggtgatcaacaacggccccagcaggctccctggctcc
atagtggacatcaggatccccaaccggctggctggcaatggggccgacatgttcctcatc
atggactcacaggtggcggaggggcgagggaactgcaccccccacaggaacccccagccc
tgtaccatcccccaggacagagagaatatcttccacaccatcttcgccttcttcaccaag
tctggccgcagggtcctggattgtgaccggccagggagagcatgtttaaccatctcatgt
actctgggctcccagaccaaagaggatgctatcagtatagatgtgaaacttctactaaac
acagagatactgaatcgggacagctcgtcgctgatccagttcgtgacaaggggtaacgtg
agagtggacgggagggccatggaggtaccagagggcctatcagaagacacttcactggtg
ttcgaggcgctccacagccaggagccaaggggctatgttgttggttggatcattgccatc
agcctactggtgggaatactcatcttcctactgctggctgtgctgctctggaagatgggt
ttcttccgccggcgctaccgggaaatcatcgaggctgagaaaaacaggaaggacagtgac
gagagctgggattgggtggaaaagaaccactga

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