Salvelinus namaycush (lake trout): 120029849
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Entry
120029849 CDS
T07522
Symbol
itga9
Name
(RefSeq) integrin alpha-9
KO
K06585
integrin alpha 9
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04510
Focal adhesion
snh04512
ECM-receptor interaction
snh04514
Cell adhesion molecules
snh04810
Regulation of actin cytoskeleton
snh04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
120029849 (itga9)
04514 Cell adhesion molecules
120029849 (itga9)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
120029849 (itga9)
09142 Cell motility
04820 Cytoskeleton in muscle cells
120029849 (itga9)
04810 Regulation of actin cytoskeleton
120029849 (itga9)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
snh04515
]
120029849 (itga9)
Cell adhesion molecules [BR:
snh04515
]
Integrins
Integrin alpha subunits
120029849 (itga9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_1
Integrin_A_Ig_2
Integrin_A_Ig_3
FG-GAP
FG-GAP_3
FG-GAP_2
Integrin_alpha
Motif
Other DBs
NCBI-GeneID:
120029849
NCBI-ProteinID:
XP_038831084
UniProt:
A0A8U0TVU2
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Position
Sna35:13342451..13468447
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AA seq
1030 aa
AA seq
DB search
MRKRMAHFQNQKRSLLNVLYVYLSVSVVHSYNIDLEHPIVFRGPDSSFFGYSVLEHYHDN
TRWVLVGAPKANSSHSSSVHTPGAVFKCRVHSNPERRCTEMDLGRGNKPRESCGKTCQGD
RDDEWMGVSLARQDKSNGKILACAHRWKNVYYDSELILPHGYCSIIPPTLQGRTQALIPC
YEDYKQKYGEEHGSCQAGIAGVFTEELVVMGAPGSYYWTGTVKVYNLTSNTFYNPNKEEV
DSHRYSYLGYAVTAGHFSSPNFIDVAAGAPQHSGGGKVYIFRIDGGSLVKIFQASGKMMG
SYFGSSLCAVDLNRDGLSDLLVGAPMHSTLRDEGQVSVYLSKGNGVMEQAELLNGDDAYN
AHFGECITAIGDIDDDGYQDVAIGAPKEDDYGGAVYIYHGDATGIVNKYSMRLSGRSVNP
AFQMFGQSISGNVDMDGNGYLDITIGAFMADSVVLLRSRPVITVDVSIYLPVSINISVPQ
CHEGPQHLNCFNATVCLLFRGKHLPGQIELLYNLTADVDKRQRSQPSRVYLVQNGAQMSS
VSNKLSLNINTVECQQYTAYVKKDVKDVFTAITFEVAYTLGKHVMDGHLDNDLPALTPVL
RWKKGDKIAAKNETWFEKNCLSDDCAADLRLHGKLLLSGLHVHPHLALGGVRNVSLNVTI
SNAGDDAYDTNIYFTFSREVFYINYWQREEKGISCGLVDLDFLKCSVGFPFMRAQTKYHL
AVIFDTSRLSGENETLQFVVHAKSANPEHKLLDNTLDLSIPLVHEVDTTITGVVNPTSFE
YGNSIAASRFVQLEDMECNFQPLNFTFQVINNGPSRLPGSIVDIRIPNRLAGNGADMFLI
MDSQVAEGRGNCTPHRNPQPCTIPQDRENIFHTIFAFFTKSGRRVLDCDRPGRACLTISC
TLGSQTKEDAISIDVKLLLNTEILNRDSSSLIQFVTRGNVRVDGRAMEVPEGLSEDTSLV
FEALHSQEPRGYVVGWIIAISLLVGILIFLLLAVLLWKMGFFRRRYREIIEAEKNRKDSD
ESWDWVEKNH
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaaaaggatggcccattttcagaatcagaagaggagccttttgaatgtgctctac
gtgtatttgtctgtttctgtagttcactcctacaacattgacttagaacatcctattgtg
ttccgtggacctgactcgagtttctttggatattctgttctggagcactaccatgacaat
acgcgctgggtgctggtaggggccccaaaggccaactcttcccacagcagctctgttcac
acccctggagccgtgttcaagtgccgtgtccacagcaacccagagagacgctgcactgag
atggacctaggcagagggaacaagcccagggagtcttgtgggaagacgtgccagggagac
agggatgatgagtggatgggggtcagcctcgcccggcaggacaaatccaatggaaaaata
ctggcctgtgcccaccgttggaagaacgtctactatgactctgagctcatccttccccat
ggttactgttccatcatccctcctacgctacagggccggacccaagccctgatcccctgc
tatgaagactataagcagaagtatggggaagagcacggctcgtgccaagcggggatagcg
ggcgtttttactgaggagctggtggtgatgggagctccaggatcatactactggacagga
acagtcaaggtctacaacctgacctccaacaccttctacaaccccaacaaagaagaagtc
gactcacacagatacagctatctaggctatgctgtgactgctggacacttctcctctcct
aacttcatagatgtggctgcaggagctccacaacacagtggaggaggaaaagtttacatt
ttcagaatagatggtgggtctttggtgaagatctttcaagcctcagggaaaatgatgggc
tcttactttggctcctcattgtgtgcagttgacctgaaccgggacggcctgtcggacctg
ctggttggagcgcccatgcacagcacgctacgggacgagggacaggtctctgtctacctc
agcaagggcaatggggtgatggagcaggctgaactcttaaatggagatgatgcctacaat
gcacacttcggagagtgcatcactgcaatcggagacatcgatgatgatgggtaccaagat
gtggccataggagcacccaaagaggatgactacggtggagcagtctacatttaccatggc
gatgccacaggaattgtcaacaaatattctatgaggctgtctggacggagtgtaaacccc
gccttccagatgttcggccaatcaatatctggcaatgtggacatggacggcaatggatat
ctagatattaccattggtgcttttatggctgatagtgtggtgttattgaggtcccgaccg
gtgatcactgtggacgtgtccatctacctgcctgtctccatcaacatctctgttcctcag
tgtcacgagggaccacagcacctcaactgtttcaacgctacagtctgcctgctcttcaga
ggaaaacacctgcctggacagatagagttgctgtataacctgacagctgatgtggataag
agacagaggagccagccttctagagtgtacttggttcagaacggagcccagatgagctct
gtgagcaacaagctcagtctgaacatcaacacagtggagtgccaacaatacactgcatac
gttaagaaggacgtgaaagacgtgttcacagccatcacctttgaagtggcctacaccctg
gggaagcatgtgatggatggacatcttgacaatgacctgcctgctctcacacctgtactg
cgctggaagaaaggagacaagatagcagcaaagaatgagacatggtttgagaagaactgc
ctgtctgatgactgtgctgctgacctgagactccatgggaaactgctgctttctgggctc
catgtccatccccaccttgccctaggaggagtgaggaacgtctctctgaacgtgaccatc
tccaacgcaggggacgatgcctacgacaccaacatctacttcaccttctccagagaggtc
ttctatatcaactactggcagagggaagagaagggtatttcctgtggtcttgttgattta
gacttcctcaaatgcagcgtgggatttcccttcatgagagcacagactaagtatcatctt
gcagtgatcttcgacacaagccggctttcaggggaaaatgagacattgcagtttgtagtt
catgcaaaaagtgccaaccctgaacataaactgttggacaacaccttggatctatctatc
ccactggtccatgaggtagacacaactatcactggtgtggtgaacccaacgtcctttgag
tatgggaactccatcgctgcctctcgcttcgtccagctggaggacatggagtgtaacttc
cagccactcaactttacctttcaggtgatcaacaacggccccagcaggctccctggctcc
atagtggacatcaggatccccaaccggctggctggcaatggggccgacatgttcctcatc
atggactcacaggtggcggaggggcgagggaactgcaccccccacaggaacccccagccc
tgtaccatcccccaggacagagagaatatcttccacaccatcttcgccttcttcaccaag
tctggccgcagggtcctggattgtgaccggccagggagagcatgtttaaccatctcatgt
actctgggctcccagaccaaagaggatgctatcagtatagatgtgaaacttctactaaac
acagagatactgaatcgggacagctcgtcgctgatccagttcgtgacaaggggtaacgtg
agagtggacgggagggccatggaggtaccagagggcctatcagaagacacttcactggtg
ttcgaggcgctccacagccaggagccaaggggctatgttgttggttggatcattgccatc
agcctactggtgggaatactcatcttcctactgctggctgtgctgctctggaagatgggt
ttcttccgccggcgctaccgggaaatcatcgaggctgagaaaaacaggaaggacagtgac
gagagctgggattgggtggaaaagaaccactga
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