Salvelinus namaycush (lake trout): 120029950
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Entry
120029950 CDS
T07522
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 3 isoform X1
KO
K22991
WD repeat-containing protein 45
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
120029950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120029950
Membrane trafficking [BR:
snh04131
]
Autophagy
Other autophagy associated proteins
Others
120029950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_Vps41
BCAS3_WD40
ANAPC4_WD40
WD40
WD40_Prp19
Beta-prop_IFT122_2nd
Beta-prop_HPS5
WDR55
Beta-prop_WDR35_TULP_N
EIF3I
Beta-prop_EML
Beta-prop_IFT140_2nd
Beta-prop_VPS8
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
Beta-prop_DCAF12
DUF1513
Motif
Other DBs
NCBI-GeneID:
120029950
NCBI-ProteinID:
XP_038831188
UniProt:
A0A8U0PUQ5
LinkDB
All DBs
Position
Sna35:complement(23181107..23192470)
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AA seq
354 aa
AA seq
DB search
MNLLPSNAHGNGLLYAGFNQDHGCFACGMENGFRVYNTDPLKEKEKQGTQHCDSESQEFM
EGGVGHVEMLFRCNYLALVGGGKKPKYPPNKVMIWDDLKKKTVIEIEFSTEVKAVKLRRD
RIVVVLDSMIKVFTFTHNPHQLHVFETCYNPKGLCVLCPNSNNSLLAFPGTHSGHVQIVD
LANTEKPPVDIPAHEGALCCIALNLQGTRIATASEKGTLIRIFDTMAGHLIQELRRGSQA
ANIYCINFNQDASLICVSSDHGTVHIFAAEDPKRNKQSSLASASFLPKYFSSKWSFSKFQ
VPSNSPCVCAFGTEPNSVIAICADGSYYKFLFNQKGECSRDVYAQFLEMTDEKI
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgaatctactaccatcaaacgcacatgggaacggactactgtacgcgggattcaaccag
gatcacggatgctttgcttgcggaatggagaatgggtttagagtgtacaacacagatcca
ctcaaagagaaagaaaaacaagggacacagcattgtgacagcgagagccaagagttcatg
gagggcggggtcgggcatgtggagatgctgttcaggtgtaactacctagcgctggttgga
ggagggaaaaagccaaaatacccacctaacaaagtgatgatctgggatgacctgaagaaa
aagacggttatagaaattgagttctccactgaagtcaaagcagtgaagcttcgaagggac
aggatcgtggtggtcctggactctatgatcaaagtgttcacgttcacccacaaccctcat
cagctgcatgtgtttgagacctgctataaccccaaaggtctgtgtgtgctctgtcccaat
agtaacaactctctgctggcgttcccggggacccactctgggcacgtgcagatcgtagac
cttgccaacacagagaagcctccagtggacatccccgcccacgagggggcgctgtgctgc
atcgccctcaacctgcagggaaccaggatagccactgcctccgagaaagggaccctgatc
agaatatttgacaccatggcaggccacctgattcaggagttgaggcgagggtcacaggct
gctaacatctactgcatcaatttcaaccaggatgcgtccctcatctgtgtgtctagtgac
cacggtacagtccacatattcgctgcagaggaccccaagagaaacaaacagtccagctta
gcctcggccagtttccttcctaagtacttcagctccaagtggagcttctccaagttccag
gttccatcaaactcgccgtgtgtgtgtgccttcggaacagaacccaactctgtcatagcc
atttgtgctgatggcagctactacaagttcctgttcaatcagaagggggagtgttcccga
gacgtctacgcacagttcctggagatgacagacgagaagatctga
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integrated database retrieval system
