Salvelinus namaycush (lake trout): 120029955
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Entry
120029955 CDS
T07522
Name
(RefSeq) homeobox protein Nkx-2.5-like
KO
K09343
homeobox protein Nkx-2.3
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120029955
Transcription factors [BR:
snh03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
120029955
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
DUF5556
HTH_NDX
DUF7645
Motif
Other DBs
NCBI-GeneID:
120029955
NCBI-ProteinID:
XP_038831192
UniProt:
A0A8U0PU95
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Position
Sna35:complement(6007932..6010816)
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AA seq
340 aa
AA seq
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MIIMLPSPVISASTTPFSVKDILKLELQQHAQQQRLASHLGPPHERSHPGPQQHQYNLQS
PPSCMLAGRDSPSPGLSEEEERMAYLSSLTVQERLMETGLAGEIFISPGLQGHSADTSLE
VEQEDIDAKACGAMGVRACEESPQAHSDLERLPKQQRTRRKPRVLFSQAQVFELERRFKQ
QRYLSAPEREHLANTLKLTSTQVKIWFQNRRYKCKRQRQDKTLEMAGHPHHLPPPRRVAV
PVLVRDGKPCLAGSQNYNTSYSVGACSPYSYNGYPAYSYNNPVYTNTYSCTYSSLPALAP
NSTANAFMNMGLANLGASQSQAQTPQGTGCQGTLQGIRAW
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgataataatgcttcctagccctgttatttctgcctccaccacgccgttctcagtcaag
gacatactgaagttggagcttcagcagcatgctcaacaacagcggcttgcctcacacctt
gggccgccccatgagcgctctcacccgggtccacagcagcaccaatacaacctccagtcg
cccccgtcttgtatgctggccggcagggacagccccagccccgggctctcggaagaagag
gagaggatggcctacctgagtagtctgacggttcaggagcggctaatggagacgggtcta
gcaggggagatattcatttccccggggctgcagggacattcagccgacaccagcctggag
gttgagcaagaggacatagacgccaaagcttgtggcgcaatgggggtgagggcctgtgag
gagtccccgcaggcgcactcggacttggagagactcccaaaacagcagaggacccggcgg
aaaccgcgcgtgctcttctcccaggcgcaggtgttcgagcttgagcggcgcttcaagcag
cagcgttacctatccgcccccgagagggaacacctggcgaacactttgaaactgacctcc
acacaggtcaaaatctggttccagaacaggaggtataagtgtaaacggcagcggcaggac
aagaccctagaaatggccggacaccctcaccatcttcccccacctaggagagtggcagtc
ccggtgctggtgcgggatgggaagccctgcctggctggatctcagaactataatacatcc
tacagtgttggagcgtgcagcccctatagttataacggctatccggcttattcttacaat
aatccagtgtatactaacacatactcatgcacgtactctagcctgcctgctctagcaccc
aactctactgctaacgcttttatgaatatgggtctggcgaacctgggcgcgtcgcaatct
caggcccaaacaccacagggaacaggctgccaaggaactctgcagggcattcgggcctgg
tag
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