Salvelinus namaycush (lake trout): 120029988
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Entry
120029988 CDS
T07522
Name
(RefSeq) exportin-5-like
KO
K14289
exportin-5
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120029988
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
snh03016
]
120029988
03036 Chromosome and associated proteins [BR:
snh03036
]
120029988
Transfer RNA biogenesis [BR:
snh03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
120029988
Chromosome and associated proteins [BR:
snh03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
120029988
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exportin-5
Xpo1
IBN_N
Motif
Other DBs
NCBI-GeneID:
120029988
NCBI-ProteinID:
XP_038831233
UniProt:
A0A8U0PUT3
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Position
Sna35:10047735..10077891
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AA seq
1221 aa
AA seq
DB search
MGEPVSEMCDHLIKAVNVMMDAESSQIYRLEALKFCEEFKEKCPFCVPCGLQLADKAQTP
VVRHFGLQILEHVIKFRWNNMPQQEKVQLKNCAMGLLSTGTYPILEEESHIKDVLARIIV
EMIKREWPQHWPDMLKEMEALTSIGEAQTELVMMILLRLAEDVITFQTLPAQRRRDIQQT
LTQNMDSIFSFLLTILQLHVDEYRKLKKIPGQELQAKAHCRVGVAALNTLAGYIDWVALA
HLTNDNCRLLEMLCLLLSETELQLEAAECLLIAISRKGKLEDRKPLMVLFDDVAMHYILS
AAQSADGAATCNKSSPTQPVVERHYIFLKRLCQVLCSLGSQLCFLVGSDVEVDVPANLSK
YTEAFLAFTTHPSQFLRSSTQITWGTLFRHEILSKDPVIIQMMIKYFRATMTNLVKTGFP
SRNDSPSCEYSRHDFDSDEDFNSFFNSFRAQQGEAVRNACRVVPLEGFQIAAEWLQYQIS
TPIDIGTTGSKMAEGLCSILSPSAVQWDAMTFFTESVVGQIFKNVEVEKLPVDQGIELLQ
AVLNYNTQDPLILSCVLTNLSSLFPFVTHRPHFLPQVLYKLFASITFEVVEESKAPRTRA
VKNVRRHACSSIIKMSRDYPWFILPCFDILYNQVKKLFSNEALLTQMEKCALIEALVLIS
NQFKDYTKQKAFLEELMATVAARWTSDEMRQVLLEPALFLAFVGADQLMAEGTDHTTGIN
RSRLSFCVYTILGVVKRARWPADLEEAKAGGFVAGYTPSGAPIYRNPCTPQVLALLPNLL
ALIRTHNNLFLPENMCRLSETFSRAYEVIEVERKVVLGLTQPVLDIYDSPVYKTHLERMQ
GFFCTLYDNCYHILGNAGLSLHQDFYTIDGLAEQIVGSALISLDNVPDHRLRPMLRVFLK
QLVLSCPQEYYDSLLCPLLGPLFAYMLQRLNLRWQIINQRSTVSMEDEEDEACEENQVTQ
EMLEEQLVRLVTREVLDLLTHACILKKVPEPAGNKEDVDEDEMMSTESQAVTASPAQPTG
EMTELGKCLLKHEDIYMTLLTISFTSLSWKDTSNCHRTASMVCWTLLRQVVGGNLLPEAV
TWFYASVLKGLQMHGQHEVCNSALTQLALIIYDNLRPRYIELRSVMTQIPSINLEALDQY
DQRLLEPSSTQKVGEKKRKDQFKKLIAGTVGKALGQQFKKEVHIRNLPSLFKKPKLEKRD
IVEPSETGSLAALFSPTQNDI
NT seq
3666 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaaccagtgtctgaaatgtgtgatcacctcatcaaagctgttaacgtgatgatg
gacgcggaatctagccaaatatatcgtctggaggccctaaagttttgtgaagaattcaaa
gagaagtgtccattctgtgttccatgtgggctacagttagcagataaagcccaaacacca
gtggtgaggcactttggtctacagatactggagcacgtcatcaagttcagatggaacaac
atgccacagcaggagaaagtccagctgaagaactgtgccatggggctgttgtcaactggc
acctatccgatcctggaggaggagagtcacatcaaggacgttctcgcacggatcatagtg
gagatgatcaagagagaatggcctcagcactggcctgacatgctcaaggagatggaggca
ctcaccagcataggggaggcccagacagagctggtgatgatgatcctgctgcggctggcg
gaggacgtgatcaccttccagaccctgcccgcccagcgccgcagggacatccagcagacc
ctcacccagaacatggatagcatctttagcttcctgctcaccatcctgcagctccacgtc
gacgagtaccgcaaactgaaaaaaataccaggccaagaattgcaggccaaggcccactgt
cgtgtaggtgtggctgctctgaacaccctggcaggttacatagactgggtggccctggcc
cacctcaccaatgacaactgtcgcctgctggagatgctgtgtctgctgctcagtgagaca
gagctgcagctggaggctgccgagtgcctgctcatcgccatcagccgcaaggggaagctg
gaggacaggaaaccgctgatggtgctgtttgatgacgtcgccatgcactacatcttgtcc
gcagcacagtctgcagatggagcagcaacatgcaacaaatcctctccgacacagccagtg
gtggagagacactacatcttcctgaagaggctttgtcaggtcctgtgttcccttggcagc
caactctgcttcttagtgggttcagatgtggaggtagatgtacctgcaaacctcagcaag
tacacagaagcattcctagccttcaccactcacccaagccagttcctaagatcttccacc
cagatcacatggggaaccctattcagacatgagattctctccaaggatcctgtcatcatc
cagatgatgatcaagtacttcagagccaccatgaccaacctagtcaagactggtttccct
tccaggaacgacagtcccagctgtgagtactcccgtcatgacttcgacagtgatgaagac
ttcaactccttcttcaactcgttccgagcgcagcagggggaggcggtccggaacgcgtgt
cgtgtcgtccccttggagggcttccagattgcagcagagtggctgcagtatcagatcagt
acacccattgacatcgggaccactgggtctaagatggctgaggggctgtgctctatcctg
tctccgtcagcggtccagtgggatgctatgaccttcttcacagagagtgttgtgggacag
atcttcaagaacgtagaggttgagaagttgccagtagatcagggcattgagctgctacag
gcagtgttgaactacaacacccaagaccctctcatcctgtcctgtgtcctcaccaacctc
tcctccctcttccccttcgttacacaccgacctcacttcctgcctcaggtcctctacaag
ctgtttgcctccatcacatttgaggtggtagaggagagcaaggcgccacggacgcgtgcg
gtgaagaacgtcagaagacacgcctgctcctccatcatcaagatgtctcgagattaccca
tggttcattctgccatgttttgacatactgtataatcaggtgaagaagctgttctccaac
gaggccctgttgactcagatggagaagtgtgctctgatagaggctctggtcctcatcagt
aaccagttcaaagactacaccaagcagaaggccttcctggaggagctcatggccaccgtg
gccgctcgctggacctccgacgagatgaggcaggtactgttggaacctgctctgttcctg
gctttcgttggtgctgatcagctgatggctgaaggcacagaccacacaacaggcatcaac
aggtcacggttgagtttctgtgtatacaccatcctgggggtggtgaagagggcccgctgg
ccggctgacctggaggaggctaaggcggggggcttcgtggcgggctacaccccttctgga
gccccaatctacagaaacccctgcaccccccaggtcctggccctgctgcccaacctgctc
gccctcatcagaacccacaacaatctgttcctgccggagaacatgtgtcgtctgagtgag
acgttctccagggcctacgaggtgatcgaggtggagaggaaggtggttctaggccttaca
cagccagtcctggacatctatgactctccagtgtataagactcatctagagcgcatgcag
ggtttcttctgtaccctctatgacaactgttaccatatcctggggaatgcaggcctatca
ttgcatcaagacttctacaccatcgatggattggctgaacagatcgttggttccgcctta
atctccctcgacaacgtgcctgaccacagactccgccccatgctccgggtgttcctgaag
cagctggtgctgtcgtgtcctcaggagtactacgacagtctgctctgccccctactgggc
cccctgttcgcctacatgcttcagagactcaacctcaggtggcagatcatcaaccagcgg
agtactgtcagtatggaggatgaggaggacgaggcgtgtgaggagaaccaagtgacccag
gagatgctggaggaacagctggttcgtctggtcaccagagaggttctggacctgctcact
cacgcctgcatactgaaaaaagttcctgagccagcagggaataaggaggatgtggatgag
gatgagatgatgtccactgagtcccaggcagtcacagcctctccagcccagccaacaggc
gagatgactgagctggggaagtgtctactcaaacacgaggacatctatatgaccttgttg
acaatctcgttcacctctctgtcctggaaggacacaagcaactgtcaccgcaccgcctcc
atggtgtgctggaccctgctgcgacaggtcgtaggggggaaccttctgccagaggcggtc
acatggttctatgccagtgttctgaagggactgcagatgcacggacagcacgaggtctgt
aactcagccctcacacaactggccctgattatatatgacaacctgcggccacggtacatt
gagctaaggagtgtgatgactcagatccccagcatcaatctggaggctctggaccagtac
gaccagcggctgctggagcccagctccacccagaaggtgggagagaagaagaggaaggac
cagttcaagaagctcattgccggcaccgtggggaaagctctgggccagcagtttaaaaag
gaggtacatatcagaaatctcccatctctctttaagaagcccaagctggagaaaagggac
attgtggagcccagtgagactggatctctagcagctctcttctccccaacacagaacgac
atctag
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