Salvelinus namaycush (lake trout): 120030054
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Entry
120030054 CDS
T07522
Name
(RefSeq) homeobox protein SIX2-like
KO
K19472
homeobox protein SIX2
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120030054
Transcription factors [BR:
snh03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
120030054
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIX1_SD
Homeobox_KN
Homeodomain
HTH_3
HTH_NDX
Phage_mat-A
HTH_72
Motif
Other DBs
NCBI-GeneID:
120030054
NCBI-ProteinID:
XP_038831301
UniProt:
A0A8U0TXB9
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Position
Sna35:complement(6443156..6445485)
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AA seq
287 aa
AA seq
DB search
MSMLPTFGFTQEQVACVCEVLQQGGNIERLGRFLWSLPACEHLHKNESVLKAKAVVAFHR
GNFRELYKILESHQFSPHNHPKLQQLWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRS
IWDGEETSYCFKEKSRSVLREWYTHNPYPSPREKRELAEGTGLTTTQVSNWFKNRRQRDR
AAEAKERENNENSNTNSHNPLTSSMNGNKTLLGSSDDDKTPSGTPDNTSSTPAMLIASNS
GLQMHGLAPPPGPSAMPVSSHDSVHHHHSLHDTILNPMSSNLVDLGS
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgtctatgcttccaacttttggctttacgcaagagcaagtcgcttgcgtctgcgaggtc
ctccaacagggtggaaacattgaacggctcgggcgctttttgtggtctttacccgcgtgt
gagcacctccacaaaaatgaaagtgttctcaaagctaaagctgtggtcgcattccacaga
ggaaatttcagagagctttataagatccttgagagccaccaattttcccctcacaatcac
ccgaagctgcagcagctgtggctcaaagcgcactacgtcgaggcggagaagctccgaggc
cgccctctcggggctgtgggtaaataccgcgtccgcagaaagttccccctgcctcggtct
atctgggacggcgaggagacaagttactgtttcaaagagaagagccggagcgtactcaga
gaatggtacacacataacccctacccttccccgcgagagaagagggagctcgccgaaggc
accgggttgacaaccacgcaagtcagtaactggttcaaaaacagacggcaaagagaccgc
gcggcagaagctaaggaaagggaaaacaacgaaaactccaacaccaacagccacaaccca
ttgacttcttccatgaatggaaataaaacacttttggggagctcagatgacgacaaaacg
ccttcagggactcctgataacacctcgtcgactccggctatgctcatcgcttcaaactcg
gggctgcagatgcacggcctagcgcctccacccgggcctagcgccatgccagtgtccagc
catgactctgtgcaccatcatcactctttgcacgatactatactgaaccctatgtcgtcc
aacctggtcgacctcggctcttaa
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