Salvelinus namaycush (lake trout): 120030070
Help
Entry
120030070 CDS
T07522
Name
(RefSeq) vinculin-like
KO
K05700
vinculin
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04510
Focal adhesion
snh04520
Adherens junction
snh04810
Regulation of actin cytoskeleton
snh04820
Cytoskeleton in muscle cells
snh05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
120030070
04520 Adherens junction
120030070
09142 Cell motility
04820 Cytoskeleton in muscle cells
120030070
04810 Regulation of actin cytoskeleton
120030070
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
120030070
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
snh04812
]
120030070
04147 Exosome [BR:
snh04147
]
120030070
Cytoskeleton proteins [BR:
snh04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
120030070
Exosome [BR:
snh04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
120030070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vinculin
Talin_IBS2B
Talin_R4
Mob_Pre
Motif
Other DBs
NCBI-GeneID:
120030070
NCBI-ProteinID:
XP_038831316
UniProt:
A0A8U0TXC4
LinkDB
All DBs
Position
Sna35:3203263..3261687
Genome browser
AA seq
1066 aa
AA seq
DB search
MPVFHTKTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVRVGKD
TVQTTEDHIMKRDMPPAFIKVETACTKLVQAASMLKADPYSVPARDYLIDGSRGILSGTS
DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVESMEDLITYTKNLGPGMTKMAKMIDERQQ
ELTHQEHRVMLVKSMNTVKELLPVLISGIKIFVTTKTSGSQGVEESLKNRNFTFEKMSAE
INEIIRVLQLTSWDEDAWANKDTEAMKRALALIDSKMTQAKSWLRDPDAQPGDAGEQAIR
QILDEAGKVGELCAGRERRDILGTAKTLGQITDQVSEMRARGQGASPAAKQKAQQVSQGL
DVLAGKVENAGRKLEAMTNSKQVIAKRIDAAQNWLADPNGGPEGEENIRALLSEAKKIAD
MCEDPKERDDVLRSIGEMAALTAKLSELRRQGKGDTPEARALAKHIATALQNLQSKTSKA
VANSRPAKAAVHLEGKIEQAQSWMENPTIDDGGVGQAAIRGLVAEGRRLANALPGPYRQE
LVGKCEQVEQLMAQLADLAARGDGESPQARAVAQQLQEGLKNLKGTMQEAMTQEVSDIFS
DTTTPIKLLAVAATAPPNAPNRDQVFDERAANFENHANKLAATAEKAAAVGTANKSTVEG
IQAAVKSTRDITPQVVSAARIMLRNPGNQAAMEHFETMNNQWIDNVEKMTGLVDEAIDTK
SLLDASEEAIKKDLEKCRAAMANHQPQMLVVGATSIARRANRILLVAKREVENSEDPRFR
EIVKAASDELSRTISPMVMDAKAVAGNITDPSLQKGFLDSGHRILGAVAKVRDAFQPQEP
DFPPPPPDLDQLHVSDEPAPPKPPLPEGEVPPPRPPPPEEKDEDFPEQEVGEMVSEPMMM
AARQLHEEARKWSSKGNDIIGAAKRMALLMAEMSRLVRGAGGNKRALIQCAKDIAKASDE
VTKLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISEEESEQAT
EMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLHWIRKTPWYQ
NT seq
3201 nt
NT seq
+upstream
nt +downstream
nt
atgccggtttttcacacaaagacgatagaaagtatcctagagccggtggctcagcagata
tcccatctggtgataatgcacgaagaaggtgaggtggacgggaaagctatcccggatctc
acggctcccgtggctgccgtgcaggcagctgtcagcaacctggttcgggtggggaaagac
actgtccagaccacagaagaccacataatgaagagagacatgcctccagctttcatcaag
gtggagactgcatgcaccaagctggtgcaggctgcgtccatgttgaaagcagacccttac
tccgtccctgctcgagattacctcatcgacggctcccgtggaatcctctctggcacctct
gacctgctgctcaccttcgacgaggctgaggttcgtaaaatcatccgtgtgtgtaaaggt
atcctggagtacctgaccgtggcagaggtggtggaatccatggaggatctgatcacgtac
acaaagaacctgggacctgggatgacgaagatggccaagatgattgacgagaggcagcag
gagctgacccatcaagaacaccgcgtgatgctagtcaagtctatgaacacggtcaaagag
ttgctacctgttctaatctcaggtatcaagatctttgtgacgaccaagacttccggcagc
cagggagtagaggagtctctgaagaacaggaacttcaccttcgagaagatgagcgctgag
atcaacgagatcatcagggtgctgcagctcacttcctgggacgaagacgcctgggccaat
aaggatacagaggccatgaagagagctctggcgctcatcgactctaagatgacccaggcc
aagagctggctgagggaccccgacgcccaaccaggggacgcaggagaacaggccatccgc
cagatcctggatgaggctgggaaggtgggagagctgtgtgctgggagggagcggagggat
atcctgggcactgccaaaaccctggggcagatcactgaccaggtttctgagatgagggcc
aggggtcagggggcatctcctgcagccaagcagaaggcccagcaggtctcccagggcctg
gatgttctcgcggggaaagtggagaatgcaggccggaaactggaggccatgaccaactcc
aaacaggtcatcgccaagaggattgacgctgctcagaactggctggcagaccctaacggt
ggtcctgagggagaggaaaacattagagccctcctgtctgaggccaagaagatcgctgac
atgtgtgaagaccccaaggagagagatgacgtcctgaggtccatcggagagatggctgct
ctcaccgccaagctctctgagctccggagacagggtaaaggtgatactccggaggccagg
gcattggcgaagcatatagccacagccctacagaacctgcagtctaagaccagcaaggct
gtagccaacagcaggcctgccaaggctgctgtccacctggaggggaagatagagcaggcc
cagagctggatggagaaccccaccatcgatgacgggggagtgggccaggcagctatccgg
gggctggtggcggagggccgtcgtctggctaacgctctgccaggtccctacagacaggag
ctggtagggaagtgtgagcaggtggaacagctgatggcccagctagccgacctggccgcc
aggggagatggggagtccccacaggcgcgtgccgttgctcaacagctccaggagggcctg
aaaaacctcaaaggaacgatgcaggaggcgatgacacaggaggtgtcagacatctttagc
gacacgaccactcccatcaaactgctggctgtggccgccaccgccccacccaatgccccc
aacagggaccaggtgtttgatgagagggcggccaactttgagaaccatgccaacaagctg
gctgccacagcagaaaaggctgctgctgtggggacagcgaacaagagcactgtggagggg
atccaagctgctgtcaaatctacaagagatatcacaccacaggtggtctctgctgcccgt
atcatgctgagaaacccaggcaaccaggctgcgatggagcactttgagaccatgaacaac
cagtggattgacaacgtggagaaaatgacaggtttggtggacgaggctatagacaccaag
tctctgttggatgcctctgaggaggccattaagaaagacctggagaaatgtcgcgctgcc
atggctaaccaccagccccagatgttagtggtaggggccaccagcatcgcccgtcgggcc
aaccgcatcctcctggtggccaaacgggaggtggagaactctgaggatcctagattcagg
gagatcgtgaaggctgcgtctgatgagctgagccggaccatatctcccatggtcatggac
gccaaggctgtggctgggaacatcaccgatccaagtctgcagaagggcttcctggattca
ggccataggatcctgggggccgttgccaaggtgagagatgcgttccagccacaggaacca
gacttccccccaccacctcctgatctggaccagctgcacgtcagcgacgagcccgcccca
ccaaaaccgcctctccccgagggtgaggttcctccccccagaccccctcccccagaggag
aaggacgaggacttcccagagcaagaggtgggagagatggtgagcgagcccatgatgatg
gccgccagacagctccacgaggaggcccgcaagtggtccagcaagggtaacgacatcatc
ggtgcagccaagagaatggccctgctcatggctgagatgtcccgtctggtgcgcggtgcc
ggtgggaacaagcgtgccctcattcagtgtgccaaagacatcgcaaaagcctcagacgag
gtcacaaagttggccaaggaggtggccaagcagtgcacagacaaacgcatccggaccaac
ctcctccaggtgtgtgagcgcatccctaccatcagcacacagctgaagatcctgtccaca
gtcaaggccaccatgttgggtcgtaccaacatcagcgaggaggagtccgagcaggccaca
gagatgttggttcacaatgcccagaacctgatgcagtctgtgaaggagacggttagagag
gccgaggctgcctccatcaagatccggacggatgccggtttcaccctgcactggatccgt
aagaccccctggtaccagtaa
DBGET
integrated database retrieval system