Salvelinus namaycush (lake trout): 120030096
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Entry
120030096 CDS
T07522
Name
(RefSeq) ras-related C3 botulinum toxin substrate 1
KO
K04392
Ras-related C3 botulinum toxin substrate 1
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04010
MAPK signaling pathway
snh04145
Phagosome
snh04148
Efferocytosis
snh04310
Wnt signaling pathway
snh04370
VEGF signaling pathway
snh04510
Focal adhesion
snh04520
Adherens junction
snh04530
Tight junction
snh04620
Toll-like receptor signaling pathway
snh04810
Regulation of actin cytoskeleton
snh05100
Bacterial invasion of epithelial cells
snh05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
120030096
04310 Wnt signaling pathway
120030096
04370 VEGF signaling pathway
120030096
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
120030096
04148 Efferocytosis
120030096
09144 Cellular community - eukaryotes
04510 Focal adhesion
120030096
04520 Adherens junction
120030096
04530 Tight junction
120030096
09142 Cell motility
04810 Regulation of actin cytoskeleton
120030096
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
120030096
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
120030096
05100 Bacterial invasion of epithelial cells
120030096
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120030096
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
snh04147
]
120030096
04031 GTP-binding proteins [BR:
snh04031
]
120030096
Membrane trafficking [BR:
snh04131
]
Exocytosis
Small GTPases and associated proteins
Rho GTPases
120030096
Endocytosis
Lipid raft mediated endocytosis
Arf6-dependent endocytosis
120030096
Macropinocytosis
Ras GTPases
120030096
Others
NADPH oxidases (Nox) and associated proteins
Nox associated proteins
120030096
Exosome [BR:
snh04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
120030096
Exosomal proteins of other body fluids (saliva and urine)
120030096
Exosomal proteins of colorectal cancer cells
120030096
Exosomal proteins of bladder cancer cells
120030096
GTP-binding proteins [BR:
snh04031
]
Small (monomeric) G-proteins
Rho Family
Rac/Cdc42 [OT]
120030096
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
CagD
Motif
Other DBs
NCBI-GeneID:
120030096
NCBI-ProteinID:
XP_038831366
UniProt:
A0A8U0PVM6
LinkDB
All DBs
Position
Sna35:complement(19085760..19095307)
Genome browser
AA seq
192 aa
AA seq
DB search
MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAG
QEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPNTPIILVGTKLDLR
DDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKTVFDEAIRAVLCPP
PVKKRKRKCSLL
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
atgcaggccatcaagtgtgttgtagtgggggacggagctgtgggtaaaacatgcctgctc
atcagctacaccaccaacgcgttccccggggaatacatccccacagtctttgacaactac
tctgccaatgtgatggtagatgggaaaccagtgaatctgggtctatgggatacagcagga
caggaagactacgacagactcagaccactgtcctatccacagacggatgtgtttttgatc
tgtttctctctcgtgagtcctgcctcctttgaaaacgtccgtgccaagtggtacccagag
gtgagacaccactgccccaataccccaatcatcctggtgggcaccaagctggatctgaga
gatgacaaggacaccatcgagaagctgaaggagaagaaactcacccccatcacctacccc
cagggcctggccatggcaaaagagattggagcagtaaagtacctggaatgctcagccttg
acacagcgtggccttaagacagtgtttgacgaagccatccgggcggtcttgtgtcccccg
cccgtcaagaagaggaagagaaagtgttcactactctaa
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