Salvelinus namaycush (lake trout): 120030185
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Entry
120030185 CDS
T07522
Name
(RefSeq) coronin-1B-like
KO
K13886
coronin-1B/1C/6
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
snh04812
]
120030185
Cytoskeleton proteins [BR:
snh04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
120030185
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1899
WD40
WD40_4
WD40_Prp19
WD40_CDC20-Fz
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
EIF3I
ANAPC4_WD40
Beta-prop_WDR35_TULP_N
Beta-prop_EML
Beta-prop_EIPR1
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_SCAP
Beta-prop_HPS5
Motif
Other DBs
NCBI-GeneID:
120030185
NCBI-ProteinID:
XP_038831458
UniProt:
A0A8U0TW62
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Position
Sna36:complement(8935476..8948729)
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AA seq
505 aa
AA seq
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MSFRRGVVRQSKFRHVFAQAWKAEHCIDDVRVSRVTWDGPLCAVNPKFTAVVIESGGGGA
FLVLPLNKSGRIDQATPTVCGHAAPVLDVQWCPHDDNVIASASEDCTVKVWQIPEGGLTG
PMTEPVVTLEGHSKRVGILAWHPTAFNILLTAGCDNLVCVWDVGTGELVYQIADAHPDLI
YSVSWNREGSAICTVCKDKALRVIDPRRGTVLKVKEKVHDGTRPMRAVFLSDGKILTTGF
SRMSERQLALWDTRDMSEPMAVQEMDTSNGVLLPYYDPDTNMVYLCGKGDCTIRYFEVTD
ESPYVHFLSLYSSKEPQRGAGFLSKRGVDVNKCEIARFYKLHERKVEPISMTVPRKSDLF
QGDLYPDTASVEPSLLAEDWIAGQDAPPLLVSLSGGYVGAPSKNRDTLRNKPKLSSQGSG
TDSPPVPQQAAMPTATTREPESEGVGVVQQRVIQGEGASDRVKREEEVLSEVLAEVKALR
SVVLAQGQRIELLERQLARIEDGDV
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttccgaagaggtgtggtcagacagagcaagttcaggcacgtcttcgcccaggct
tggaaggcagagcactgcatcgatgacgtccgagtgtcccgtgtcacatgggacgggccc
ctctgcgctgtgaaccccaaattcaccgcagtagtcatcgaatcaggtggaggaggggcc
ttcctagttctgccactcaacaagagtggcagaattgaccaggccacacccacagtgtgt
ggacacgcagctccagtgctggatgtccagtggtgtccccatgatgacaacgtcatcgcc
agtgcctcggaggactgcactgtaaaggtgtggcaaatccctgaaggagggctgactgga
ccaatgacagagcccgtggtgacactggagggccacagtaaacgagtgggaatcctagcc
tggcacccgacagctttcaatatcctcctaactgcaggctgtgacaacctggtgtgcgtg
tgggacgtgggcacgggggagctggtgtaccagatagccgatgcccacccagacctgatc
tacagtgtgagctggaaccgggagggcagtgccatctgcaccgtgtgcaaggacaaggcg
ctgcgtgtcatcgacccgcgacgggggaccgtcctcaaggtgaaagagaaggtccatgac
ggcaccaggcccatgagggccgtgttcctctccgacgggaagatcctgaccaccggattc
agccgcatgagcgagaggcagctagccttgtgggatacgagggatatgtctgagccaatg
gcagtgcaggagatggacaccagtaatggcgttctcctcccctactatgaccctgacacc
aacatggtctacctgtgtggaaagggggactgcaccatccggtactttgaggtgacggac
gaatcgccctatgtccacttcctcagcctgtacagcagtaaagagccccagcgaggagca
ggctttctcagcaagaggggcgtggatgtcaacaagtgtgagattgccaggttctacaaa
ctgcacgaaaggaaagtagagcccatttctatgacggtaccacggaagtcagacctgttc
cagggggacctatacccggacacggccagcgtggagccctcccttctggccgaggactgg
attgccgggcaggatgcgccgcccctgctggtctctctgagcggtggctacgtgggcgcc
ccctccaagaacagggacaccctccgcaacaagcccaagctgtcgtcacagggctccggg
acagactctcccccagtcccccagcaggccgccatgcccaccgcaacaaccagggagccg
gagagcgagggggtgggggtggtgcagcaaagggtcattcaaggagaaggagcatccgat
agggtgaaaagagaggaggaagtgctgagcgaggtgctagcggaggtgaaggccctacgt
tcggtggtcttggcccagggccaaaggatcgagctgctggagaggcagctggcccgcatc
gaggacggggacgtctga
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integrated database retrieval system