Salvelinus namaycush (lake trout): 120030193
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Entry
120030193 CDS
T07522
Name
(RefSeq) RNA-binding protein 4-like isoform X1
KO
K13189
RNA-binding protein 14
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
snh03041
]
120030193
Spliceosome [BR:
snh03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
120030193
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GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_7
zf-CCHC
Motif
Other DBs
NCBI-GeneID:
120030193
NCBI-ProteinID:
XP_038831474
UniProt:
A0A8U0TW69
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Position
Sna36:21163006..21177306
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AA seq
633 aa
AA seq
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MDKSNTVKLFVGNLALDTTQEELSAIFEAYGQVVSCSVLRQFAFVHLQGEGAAERAIREL
NGREFRGRNLVVEESRGRPLHSTKVFVGNLSGMCTTEDLQELFQTFGKVLECDKVKARLS
SSAGYAFVHMENKEEALQAIEALHGTSFKGRPLSVELSKVQPSKQTPTGKIPCVSCGKQG
HYAGECPVGKSSLEQYQSQAAVLAAAAAAAAGLPLQVQQSVHNSVYNTSTFDPTYAALTG
LTTGTRAEGNPVNQAVYGALATQVYGANVANQLYGVQAANQAAALTQAGATQVYASSMNP
SHAALYGQLSQIAASPAAASAATAYSTPVYAHAMANHHHPGAIYLAAPGVEMPAAAAAVN
QAYAMAPALYGGAQHAYGHLGMGAAMSASADPSAAIFEAARVQHYFAQGQQVLAEQQNAA
AVAAAQAAKSGERDRSPLRRSAGSLLPDPVMKPFMYQRAPKQRRPLLPTPAGRAAEEAAE
AAEDPMAREQYQQYAEYYHQQHQQHQQLQQLQYYAEYYQQYQQYQQLQQYQQLQQYQQLQ
QLQYAYPPPNHHAIAAIPAHAMAGHAHHHGQPAHVTALDAALRPVVPASAVAAAMVAAPR
VYEPPLPPPPNRKEAVLRRAPELSLHTPEPPFR
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atggacaagagcaacacggtgaagctcttcgtgggcaacctggctctagacaccacccag
gaggagctttctgccatctttgaggcgtacggccaggtggtcagctgcagcgttctccga
cagttcgccttcgtacacctacagggtgagggtgctgcggagcgggccatcagggagctg
aacggcagggagttccgggggaggaacctggtggtagaggagtcccggggcagacctctc
cactccaccaaggtgtttgtggggaacctgtcgggcatgtgcaccaccgaggacctccag
gagctcttccagacctttggtaaagtgctggagtgcgacaaagtcaaagccaggctctcc
tcttctgcaggctacgccttcgtgcacatggagaacaaggaggaggctcttcaggccatc
gaggccctccacggcacctccttcaagggacgcccgctctccgtggagctctccaaggtg
cagccctccaagcagaccccgacggggaagatcccctgtgtgagctgtgggaagcagggc
cactacgccggggagtgccctgtagggaagtcctctctggaacagtaccagagccaggca
gctgtgctagctgcagccgccgccgccgcagccggcctgcccctccaggtccagcaaagc
gtccacaactctgtctacaacacctcgacctttgaccccacctacgcggcgttgacgggt
ctcaccaccggcacgcgagcggaaggcaaccccgtcaaccaggcggtgtatggtgccctg
gcgacgcaggtctacggcgctaacgtggccaatcagctctatggggtccaggcagccaat
caggcggcagcgttgacgcaggcgggcgccacgcaggtgtatgccagctccatgaacccc
agccacgccgctctctacggtcagctcagtcagattgccgccagccccgctgcagcgtcc
gctgccaccgcctactccacaccagtttacgcgcatgccatggctaaccaccaccacccg
ggggccatctacctggcagcacctggcgtagagatgcctgcggccgccgcggcagtcaac
caggcctacgccatggcgccggcgctctatgggggtgcccagcatgcctacggccacttg
gggatgggtgccgccatgagcgcgtcggcagatccttcggcggccatctttgaagcagcg
agggtgcagcactacttcgcccagggacagcaggttctggctgagcagcagaacgcggca
gcagtggcggcggcacaagcggcaaagtctggagagagggaccggagtcccctgaggcgc
tctgcggggtccctgctgcccgatcctgtcatgaagcccttcatgtaccagagagccccc
aagcagcgccggccgctgctccccacccccgccgggcgagctgcagaggaagcagcggag
gctgcagaggaccccatggctagagagcagtaccaacagtatgctgagtactaccaccag
cagcaccaacagcaccagcagctccagcagttacagtactatgcggagtactaccagcag
taccagcagtatcagcaactccagcagtaccagcaactccaacagtaccagcaactccaa
cagctccagtacgcctacccgcctcccaaccaccacgccatagctgccatccctgcccac
gctatggcgggccacgcccaccaccacggccaaccggcccacgtcacggcgctggacgcc
gccctcaggccagtggttcccgcctccgccgtggccgccgccatggtggcagcgcccaga
gtgtatgagccgccgctgccgccgccaccgaaccgcaaggaggccgtcctccgccgagcc
cccgaactctcccttcacacgcctgagccccccttcagatag
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