Salvelinus namaycush (lake trout): 120030248
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Entry
120030248 CDS
T07522
Symbol
chrnb1l
Name
(RefSeq) cholinergic receptor, nicotinic, beta 1 (muscle) like
KO
K04812
nicotinic acetylcholine receptor beta-1
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
120030248 (chrnb1l)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
snh04040
]
120030248 (chrnb1l)
Ion channels [BR:
snh04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
120030248 (chrnb1l)
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
120030248
NCBI-ProteinID:
XP_038831524
UniProt:
A0A8U0TXS4
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Position
Sna36:14806212..14826733
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AA seq
501 aa
AA seq
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MTMKMKMGERIDLFLWVVSACLCLTLTGASETERLLHQKIFQNYNLKVRPAKQWEEKVQV
RVGMTLSQLVSLNEKNEEMTTNVFMNMAWTDYRLSWNPEDYDNIDVLRIPPNKVWRPDIY
LINNNDGQFDVALYVNVLVYSDGTVNWLPPAIYRSSCPIEVAYFPFDWQNCTMVFRSYTY
DSSEVDLQYALDEKGEEIHEIIIDENAFTENGEWVICHKPSRKNVNPEDLYEDITFYLII
ERKPLFYVVNIIVPCILTMVLAIFVFYLPPGACEKMTLSISVLIALTVFMLLLADKVPET
SLAIPLIVNYVMFTMILVTFSVILSVVVLNLHHRTPYTHIMPPWVRKVFIHFLPKYLGMQ
RPHPEEPLEEEPSDDTPIQSIDGRRPGGEYFFRKINPELVLPWRGRSESTVQLQRFFDSD
NYCLILPPDLKSAIAAVTYMAEQLKKQDGTDSETGDWQYIAIVVDRLFLWLFVIITTLGT
LAMFMDAKLNYTPDEPFPLRT
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgactatgaagatgaagatgggagagaggattgaccttttcctgtgggtggtgtctgct
tgcctctgcctcactctcactggtgcgtcagagacagagaggctgcttcaccagaagatc
ttccagaactacaacctgaaggtccggccagctaaacaatgggaggagaaagtccaggtc
cgcgtggggatgaccctctcccagctcgtcagcctgaatgagaagaacgaggagatgaca
accaatgtgttcatgaatatggcgtggaccgactacagattatcatggaatccggaggat
tacgataatatagatgtcctcaggattcctcccaacaaggtgtggcggccagatatctac
ctcatcaacaataatgatggtcagtttgacgtggctctgtatgtcaacgtgctggtctac
agtgatgggacagtcaactggctgcctcctgctatctaccgcagcagctgccctatagag
gtggcgtactttccgtttgactggcagaactgcaccatggtgttccgctcctacacctac
gactcatcagaggtggacctgcagtatgccctggatgagaaaggagaggagatacatgag
attatcatagatgagaacgccttcactgagaacggggaatgggtgatctgccataagccc
agcagaaagaacgtgaaccccgaggacctgtatgaagacatcaccttctatcttatcatc
gagaggaagcctctcttctacgtcgttaacatcatcgtgccctgcatcctcaccatggtc
ctggccatctttgtcttctatctaccacctggcgcatgtgagaagatgaccctgtctatc
tctgtcctcatcgctctcactgtgttcatgctactgctggctgacaaggtccccgagacc
tccctggccatccctcttattgttaactatgtcatgttcaccatgatcctggtcaccttc
tcagtcatcctcagtgtggtggtcctcaacttgcaccatcggaccccctacacacacatt
atgcccccttgggtgcgcaaggtgttcatccacttcctgccgaagtacctgggcatgcag
aggccccacccagaggagcctttggaggaggagcctagtgatgacacgcccatccagagc
atcgacggacgcaggccggggggagagtacttcttcaggaagatcaaccctgaactggtc
ctaccctggagaggcaggagtgagagtacagtacagctccagaggttctttgacagtgac
aactactgtctgatcctccccccggacctcaagtcagccatcgctgccgtcacatacatg
gctgagcagctgaagaagcaggatggcaccgactcggagacaggagactggcagtacata
gccatcgtggtggacaggctgttcctgtggctgtttgtcatcatcactactctggggact
ctggccatgttcatggacgccaaactcaactacaccccagacgaacctttccccctgaga
acgtag
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