Salvelinus namaycush (lake trout): 120030325
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Entry
120030325 CDS
T07522
Symbol
gigyf1a
Name
(RefSeq) GRB10-interacting GYF protein 1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
snh03019
]
120030325 (gigyf1a)
Messenger RNA biogenesis [BR:
snh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
120030325 (gigyf1a)
Surveillance factors
Other surveillance factors
120030325 (gigyf1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GYF
GYF_2
TRI4_N
DUF6033
Motif
Other DBs
NCBI-GeneID:
120030325
NCBI-ProteinID:
XP_038831617
UniProt:
A0A8U0PUX5
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All DBs
Position
36:16371770..16399650
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AA seq
1059 aa
AA seq
DB search
MTAETLNFGPEWLRALSSGGSVTSPPPSPAMPKYKLAEYRYGREEMLALYIKENKAPEDM
QDKEFASILQDEPMQPLALEPLTEEEQRNFSMSVNSVAVLRLMGKGGGVAPAGVARGRGT
TRGGGRGRGRGESGGFYQRSIEEGEVGFGRGAREIHRSQSWDDRGERRFEKPVRAREGVR
VGFEEATGVPVPGVPRKDYTRSDSENWRSLREEQEEEEEGADPGGSWRLAGARRLDDGGP
KSAGWREHDGQVEGRRRKFEFDFGGGRRRAGSEGLEDDRDGLPEWCTDEEGEMGTFDASG
AFLPISKGGKEDEFDFQGIEEEEGGGESLSDMKRIMNGGQRVDVKESAGTSPSSSSSPPG
PLSAPPALALNPPMPQLSLTVAELEASQMANSHPVSVPVPVPVKASKMPSEVLEGSPAGS
STTQHSPSTTSSLPSPPPSSAANHLSLPPGGDTEDDEGMKHLQQEAEKMVASLQDTSLEE
ESFTQTLQESRNTASALPLSHDAAMKWFYKDPQAEIQGPFTTLEMCEWFQAGYFSMSLLV
KRGCDEGFQPLGDVIKMWGRVPFAPGPSPPPLLVRPPPPRPQPLPPRGSAGSMDQDRLKK
QQEQAAAVLYQQLQQQQQLFQLISRCGEQGILPSVNRSMSVPDTGSMWDMHTSASQQSGG
EASLWDLTMNSSTQGPTLEQLQKLQQERREAELRAKREEEEQRKRREEKRRQQEEQKRRE
EEEIFRRKQCRQQQELIMKLLQQAPQQGSGSGVGSGWGTGGLNKSGAKGLSLLDMQEAER
LLKQQQRAQQQQRERHQGLSMGGSSMGQWGDGGAVTGGLWGGGGGMEGKAGGGMGLWDEA
VKNQTRSSSMQGLKNSRSSPSLSEQYMLSCRKQRTDEEDKLLKLLQGIKTPQDGFTTWCE
QMLHALNTQANNTSSPLDVSTIVAYLKEVESPYEVHDFIRSYLGDTMEAKEFAKHFLERR
AKQKQNLQRQQQQLSKEVAGLAMNNFPLPDSMRGVSPSTLQSMFQAAQMGKEGLYDTQGA
MKKKKQPVVLHSDPSILGYSYHNAGERLSLNEMEMVEDY
NT seq
3180 nt
NT seq
+upstream
nt +downstream
nt
atgactgctgagacacttaacttcggccccgaatggctccgtgcactatccagtgggggg
agtgtgacgtccccccctccttcccccgccatgccaaagtacaagctggccgagtatcgc
tacggccgagaggagatgttagcactttatatcaaagagaacaaggccccggaggacatg
caggataaggagtttgcttctattctgcaagatgagcccatgcagccgctggcactggag
cctctcactgaggaggagcagaggaacttctcaatgtctgtgaacagtgtggctgtgctg
aggctcatgggtaaaggagggggagttgccccagcgggcgtggcacggggcagaggcacc
acgcgaggaggaggccgagggcgaggtcgaggcgagagtggaggattctaccaaagaagt
attgaggagggagaggtaggcttcggccgtggagccagagagatccaccgcagccagagc
tgggacgataggggcgagaggcgttttgagaagcctgtgcgtgccagggagggggtacgt
gttggcttcgaggaggcgaccggtgtccctgtgcctggggtaccgaggaaggactacaca
cggtcggacagtgagaactggcgtagcctccgagaggagcaggaggaggaggaggagggg
gccgaccctgggggcagctggagactggccggagcacggagattagatgatggaggtcca
aagtcagcaggctggcgggagcacgacggtcaggttgaggggcgtcgcaggaagtttgag
tttgacttcggcgggggtcgcaggcgggccggcagcgaggggttagaggacgacagagac
ggactgcctgagtggtgcactgatgaagaaggagagatgggcaccttcgacgcttccgga
gccttcctacccatatccaagggaggaaaggaggatgaatttgacttccagggaatagaa
gaggaggaaggagggggggagagtctttctgacatgaagaggatcatgaatggaggacag
agagtcgatgtaaaggaatccgctggtaccagtccctcttcctcctcctctccccccggc
cccctctctgcccctccagctctggctctcaacccccccatgccccagctgtccctcacc
gtggctgagctggaggcctctcagatggccaacagccaccctgtctctgttcctgttcct
gttcctgtcaaggccagcaagatgccaagtgaagttctcgagggctctccagcagggtcc
tccaccacccaacatagccccagcaccacctccagtctgccttcaccccctccctcctct
gctgctaaccatctctccctgccaccggggggcgacaccgaggacgacgagggcatgaag
cacctgcaacaggaggcagagaagatggtggcgtccctgcaggacacgtctctggaggag
gagagtttcactcagacgctgcaggagagcagaaacacagcctccgccctgcccctctcc
cacgacgctgccatgaagtggttctacaaggacccccaggcagagatccagggtccattc
accaccctggagatgtgcgagtggttccaggcaggctacttctccatgtctctgctggtg
aagaggggctgtgacgagggcttccagccgctgggtgacgtcatcaagatgtggggacgc
gtgcctttcgcccccgggccctccccgccacccctgctggtgagacctccaccgccacgc
cctcagcctctaccgccccgggggtctgctggtagcatggatcaggaccgtctgaagaag
cagcaggagcaggcagcagcagttctctatcaacagctccagcagcagcagcagctattc
cagctcatcagcaggtgcggagagcagggtattttgccttcggtgaacaggtcgatgtca
gtgccagatacagggtccatgtgggacatgcatacctcagcttcacagcaatcaggcggt
gaagccagtttatgggacttaacaatgaattcttcaactcagggtccaactctcgaacag
cttcagaagctccagcaggagaggagagaagctgaactcagggcgaagcgcgaggaggag
gaacagcgcaagaggagggaagagaagaggaggcagcaggaggagcagaagaggagggag
gaggaggagatcttcagacgcaaacagtgtcgccagcagcaggagctgatcatgaagctg
ctccagcaggccccccagcagggctcaggctccggggttgggtctggctggggcactggg
ggtctcaacaagtcaggggccaagggcctcagtctgcttgacatgcaggaggcagagagg
cttcttaaacagcagcagagagcccagcagcagcagagagaacgtcaccaaggcctgtca
atggggggttcctccatgggtcagtggggggatggaggtgctgtcacggggggcctgtgg
ggaggcggaggggggatggagggtaaggctgggggcggcatgggtctgtgggacgaggcg
gtgaagaaccagaccagaagtagcagcatgcagggactgaagaacagccgcagcagcccc
tcactcagtgagcagtatatgctgagctgtaggaagcagcgtacggatgaggaggacaag
ctgctgaagctgctgcagggcatcaagacgcctcaggatgggttcaccacctggtgtgaa
cagatgctgcacgccctcaacacccaagccaacaacacctcctctccactggacgtgtcc
accatcgtggcgtacctgaaggaggtggagtctccctacgaggtccatgactttatccgc
tcctacctgggagacaccatggaagccaaagagttcgccaagcacttcctggagcgccgt
gccaaacagaaacagaacctgcagcggcagcagcagcagctatcaaaggaagtagcaggg
ctggccatgaacaacttccctctgccggactccatgcggggagtgagccccagcaccctg
cagtccatgttccaggccgcccagatggggaaggaagggctgtacgacacccagggggct
atgaagaagaagaaacagcctgtggtgctgcactcagaccccagcatcttagggtactca
taccacaacgcgggcgagcgtctgagcctgaatgagatggagatggtggaggattactga
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