Salvelinus namaycush (lake trout): 120030342
Help
Entry
120030342 CDS
T07522
Symbol
si:cabz01101003.1
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase CYLD
KO
K08601
ubiquitin carboxyl-terminal hydrolase CYLD [EC:
3.4.19.12
]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04217
Necroptosis
snh04622
RIG-I-like receptor signaling pathway
snh04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
120030342 (si:cabz01101003.1)
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
120030342 (si:cabz01101003.1)
04625 C-type lectin receptor signaling pathway
120030342 (si:cabz01101003.1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
snh01002
]
120030342 (si:cabz01101003.1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
snh04121
]
120030342 (si:cabz01101003.1)
Enzymes [BR:
snh01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
120030342 (si:cabz01101003.1)
Peptidases and inhibitors [BR:
snh01002
]
Cysteine peptidases
Family C67
120030342 (si:cabz01101003.1)
Ubiquitin system [BR:
snh04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
120030342 (si:cabz01101003.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAP_GLY
UCH
Motif
Other DBs
NCBI-GeneID:
120030342
NCBI-ProteinID:
XP_038831644
UniProt:
A0A8U0TXW1
LinkDB
All DBs
Position
36:complement(19110513..19130620)
Genome browser
AA seq
935 aa
AA seq
DB search
MSGAQEYKRQQPPKMYLVVSNLKIQDQLEGTIRLLRGNLCQEQEGGRSRGDQLWVKVLDY
GCMVKIDKQLLIEVPTDLTGLLEPVSDPESRLNLLINPKQLYRLAALPLGTPLYVQMGQP
GELAEAELRYRGPLTRGSTAVLFGVQLKDSAVGRGNSNGSYKGHQLFTCPEASALFLPAN
QIRLRRWSRANDDHHNNALPPQPQPSIGNIIARTAESSPSLAPVLARNPSSPPPLQVGHR
VCFPLEDTVHGGEVRFCGVLPGRTSTGVFVGILLDNAVGNWDGSYKGEKLCSISSSLYGC
LLPISKVSPEPRSRRHTPPLQNPKPVLKPTQPPAPVSSPASTPKIALMPPQLLSAKLALK
PPPLPSPKPFTKPHPLPPTPPTIKPLTLPSPTATDQPQLLSDSPGPLSPGRGDGLDAEEN
GDAGLEIELEVGSMVEVNDPPLFGVIRWIGRISGVPQLVSGIELDQELTAGTDGSYLGER
HFRCPANKGLFVKLRNCRRDSRFPAPETPVNQVERCNSIAFAEWGSERVEEHTPPVQGDE
ARDMYQGWKRGIQGHLNSCYLDASLFSLFSCCSSVDWVLLWPSNPSDGPHCSQAQDLLRC
EIVNPLRRFGYVCASKTMALRRLLEAESSDTGFTNQEKDPEEFLNKLFQLLRVEPLLKIR
SVTQKQQPQECHLYQLFPPSVPLCPSSPVPLSPSLCPIPLSSPAVLMRVANVQTLLETSF
LHAGLKFAEAPSCLPLLMPRFGKDFKMFDAILPSLTIDITDLLDDTLRQCSICQAVAEWE
CLECYEDLDITPGHLKQYCHTCNTQVHIHKKRQSHSPCQVGVAGGPWTGPLHGTRQRLAL
FAVTCIETSHYVSFVKHGPRPDDWLFFDSMADREGGENGFNIPQVRACPEVGRYLSLSAE
ELGRLDPASLRESARRLLCDSYMCLYHSPELSLYK
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atgtctggggcccaggagtacaagagacagcaacccccgaaaatgtacttggtggtatcc
aacctaaagattcaggaccagttggaaggtaccatccgactgctacgggggaacctctgt
caggagcaagaggggggaaggagcaggggcgaccaactgtgggtaaaggtgttagactat
ggttgtatggtaaagattgacaaacagctccttatagaagtccccaccgacctgaccggc
ctattggagcctgtatccgatccggagtcccgcctcaatttgctcattaaccccaagcaa
ctttaccgattggctgccttacccctaggcacccccctctatgtccagatgggccaacca
ggggagctggcggaggcagagctgaggtatcgaggaccgctgaccaggggaagtactgct
gtgttgtttggggtgcagctgaaggactcagcagtaggtagaggcaacagtaatggttct
tacaaaggccatcagctcttcacctgtcccgaagcctccgccctcttcctaccggccaat
cagatcaggctacgacgctggtcccgtgccaatgacgaccatcacaacaacgctcttcct
cctcaacctcaaccctccattggtaacatcattgctagaacggccgaatcgtctcccagc
ctggccccagtcctggctcgaaaccccagctccccacctcccctccaggtgggccacagg
gtgtgcttccccctggaggatactgtccatgggggagaggtgaggttctgtggggtcctg
cctggacggacctccactggggtgtttgtaggaatcctgttggacaatgcggttggtaac
tgggatggttcatataaaggagagaagttgtgctccatctcctcttctctgtatggttgc
ctgctacccatctccaaggtgtcccctgaaccaaggtcacgccgccacactcctcccctc
cagaaccccaaaccggtcctcaaacccacccaaccacctgcccctgtatcctcacctgcc
tccaccccaaagatcgctctgatgcccccccaactcctctcagccaaactggccttaaaa
cctccacccctccccagccccaaacctttcacgaaacctcacccccttcccccaacccct
cccaccatcaaacctctaaccctgccctccccgaccgccaccgaccaaccacagctcttg
agcgattcgcccggtcccctctctccgggtcgaggtgacggattggacgctgaggagaac
ggagacgcgggattggagattgagttggaggtggggtccatggtggaggtgaatgacccg
cccctttttggagtgattcgttggattggacgaatcagtggagttccacaactggtgtca
ggaatcgagctggaccaggaactgaccgctggaacagacggcagttaccttggcgaacgc
cacttccgttgccctgccaacaaggggctgttcgtcaaactccggaactgtaggcgggat
tccagattccctgcccctgagacaccagtcaatcaggtggagcgctgcaactccatagcg
tttgccgagtggggcagtgagcgtgtcgaggagcacacccctccagtccagggggacgag
gccagagatatgtaccagggctggaagagaggcatccaaggccacctcaactcctgctac
ctggacgcctcactattcagtctgttttcatgctgcagttcagtagactgggtgttgctg
tggccctcgaacccctcagacggtccccactgcagccaagcccaggacctgcttcgctgt
gagatagtcaaccccctacgcaggtttggctatgtatgtgccagtaaaaccatggccctg
agaagactactggaggctgagagtagtgacacaggcttcaccaaccaggaaaaagaccca
gaagagttcctcaacaagcttttccagctcctccgggtcgaacctcttctgaagatcagg
tcagtgacacagaagcagcagcctcaggagtgtcacctctaccagctcttccctccatcc
gttcccctctgtccctcttcccctgtccctctgtctccgtccctctgtcccatccctctc
tcctcccctgcagtactcatgagagtggccaatgttcagactctgctagagacatctttt
ctccacgcgggactaaagtttgctgaggccccttcctgcctccccctcctcatgcctagg
tttgggaaggacttcaagatgtttgacgccatcttgccttcactcaccatcgacatcaca
gacctgctggatgacactctcagacagtgcagtatttgccaggcagtagcagaatgggag
tgtctagagtgttatgaagacttggacatcacacctggtcatctcaaacagtactgccac
acctgcaacactcaggtgcacattcacaagaagcgccagtcccacagtccatgtcaggtg
ggtgtggctggtggtccgtggactggcccactgcatggaactcgtcagcgattggctctc
tttgctgtgacgtgcatcgagaccagccactacgtgagcttcgtcaagcacgggccccgc
cccgacgactggctgttctttgacagtatggccgacagggaaggcggggagaacggtttc
aatattccccaggtgagggcgtgtccagaggtgggccgctacctcagcctatcggcggag
gagctgggcaggctagaccccgcctccttgagagagtccgctcgccggctgctgtgtgac
tcctacatgtgtctctaccacagccccgagctcagcctgtacaagtga
DBGET
integrated database retrieval system
