Salvelinus namaycush (lake trout): 120030454
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Entry
120030454 CDS
T07522
Symbol
si:dkeyp-23e4.3
Name
(RefSeq) rho GTPase-activating protein 7 isoform X1
KO
K20632
deleted in liver cancer protein
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120030454 (si:dkeyp-23e4.3)
Membrane trafficking [BR:
snh04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
120030454 (si:dkeyp-23e4.3)
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Gene cluster
GFIT
Motif
Pfam:
RhoGAP
START
SAM_2
Motif
Other DBs
NCBI-GeneID:
120030454
NCBI-ProteinID:
XP_038831798
UniProt:
A0A8U0TX78
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Position
Sna3:33548104..33654429
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AA seq
1107 aa
AA seq
DB search
MAHTVKTPLRRSFSEHVKVSTNKAWDVFWKSAREKRLWEIEAKEACDWLRAAGFPQYVQL
YKDCRFPIDIDWVKTDHSFLDKDALDSLCRRLSTLNKCVELRLELGRSKRRLEESEDEEP
CAISAKWAYERQTRRWRRLEGMGFLCSPDSHDMSPCEANDRHEVCSLHSTSSTESEGREG
RKTATDDQETSRSSSRCSSTNKTMSLDTSFSGSPSPGGEMLGFSSAEERFPDKPPRKKGP
SLLRKMEKLRLRSTSTLCSPGHSGHSRTRLVISGPVLQEGLDVEHRLRRLQCLDISTLQD
RDRDRPGSQASSSPSSPHSGSSSPSTSESSSTVSTPSPITRVRSNCKRTGGVREQHQEGL
HSGPVRELQDYKDERNNHESLVFQIPQGHKPGTFPTALTHNNVLLPIDNTSVNWRTGSFH
GYRGRRSRGSAAAKDQDSPCCSPPASLDHRASIYDNVPIGQVIGQEVEHHRAAETGEISE
NNDVFSALDSVMERISDLQQLVNTWTDKLSEDSDSDSNRSSTPSPCPSSSSNHIHLEIKE
AEELGPGAVEGEGDGDRESLEKESVDGDGTEVQSLPRNIRRSQHHWSSEQSLPSVTASSP
GVEAQPVSHLHLLRKLSLLKLTALMDKYSPSSKQGWNWTFPKPPRKAKAQELKGRRVFGV
SLLHSMQQTGEPLPPSILKALFYLRTECLDQVGLFRKSGVKSRIQYLRDMVEADPEGASY
EGQSAFDVADMVKQYFRDLPEPVFSSKLCESFLHIYQYFPKDQQFCAAQAAIFLLPDEHR
EALQTLLLFLRDVVGCVDENQMTPTNIAVCLAPSLFHLNTLKREGNPARSSHRKYSLGRP
DQRDLSENLAATQGLAHMVTESLRLLQLPEFWPDQSVRSPSEEALWVDGGRSSPSQDGEE
EQDERARLDQTTQHLLREAREKSQGWESCSGPDQVDLAFKKVDDGWPLRLWKGSIEVDAP
QKEALQRVLREQGLWEKTLKQSAVVQTLTKDTEIYRYLLQGLGPRPPQEHLLLRTWQSDP
SAGPVYVSAVSTEHPEAPMEGVRAQVLSCLYLVEPLGAKRSRLTHLCRTDTRGRSKEWHN
RVSGHLLASNLLAIRDSFRPDHRETKI
NT seq
3324 nt
NT seq
+upstream
nt +downstream
nt
atggctcacactgtgaaaaccccactgcggaggtccttcagtgagcatgtgaaagtctcc
accaacaaggcttgggatgtattctggaagagtgcgagggagaaaaggctttgggagatc
gaagcgaaggaggcttgcgattggctgagagcggccggctttccccagtacgtgcaatta
tacaaagattgcaggttccccattgatatagactgggtaaagactgatcacagttttctg
gataaggatgcacttgattcactctgcaggagattaagcactttaaacaaatgtgtggag
ctgaggctggagctgggcagatcaaagagacggttggaggagtcagaggatgaggagccc
tgtgccatcagcgccaaatgggcctacgagaggcagacaaggcgctggcgtcgactagag
gggatgggcttcctgtgttccccggacagtcatgatatgtccccgtgtgaagccaacgac
cgtcatgaggtctgctccctccacagcaccagcagcactgagagtgaaggccgtgagggc
cgcaagactgccactgacgaccaagagaccagcaggagctcgtctcgctgctcctccacc
aacaagaccatgtccctggacacgtcattcagcgggtccccctccccagggggtgagatg
ctcggcttcagcagtgctgaggagcgcttcccggacaagccccccaggaagaagggccct
agtctgctgaggaagatggagaagctgcgtctgaggagcacatccaccctctgctcccca
ggtcacagtggccacagcaggaccaggctggtcatctctggccccgtgctccaggagggt
ctggatgtggagcacaggctgagacggctgcagtgcctggacatctccaccctgcaggac
agggatagggaccggccgggcagccaggcctcctcctcaccatcctccccccactcaggc
agcagcagccccagcacatcggagagcagcagtactgtcagcaccccaagccccatcacc
agggtacgcagcaactgcaaacgaaccggcggggtccgagaacagcaccaggaaggtctc
cacagcggcccggtccgagagctccaagactacaaggacgagaggaataaccacgagagc
ctggtcttccagatcccccagggacacaagccaggaacgttccccactgccctcactcac
aacaatgtcctgttgcccatagacaacacctccgtcaactggagaactgggagcttccac
gggtaccgtgggcgacggagcagggggagcgcagcggccaaggaccaggattccccctgc
tgcagccccccagcctcattggaccaccgggccagtatctatgacaacgtgccgataggc
caggtgattggccaggaggtggagcatcacagggcggcggagacgggggagatcagcgaa
aacaatgatgtgttctctgcgctggacagcgtgatggagcgtatcagcgacctgcagcaa
ctcgtcaacacctggacggacaaactgtcagaggactctgactctgactctaaccgcagc
tccaccccctctccctgcccctcctcctcctccaaccacatccacctggagatcaaggag
gctgaggagctggggccgggagccgtggagggggagggagatggggacagggagagccta
gaaaaagaatctgtggatggagatggcacagaggttcagtcactaccacgcaatatcaga
cggagccagcaccactggtcaagcgagcagagccttccctcagtgactgccagcagccca
ggggtcgaggcccagcctgtctctcacctccacctgctgcggaagctctcgctacttaaa
ctcaccgctctcatggacaagtactccccctccagcaagcagggctggaactggacgttc
cccaagcccccgcggaaggccaaggcccaagagctgaagggcaggagggtgtttggtgta
tccctcctccacagtatgcagcagacaggggaacctctaccccccagcatcctcaaggct
ctattctatctgaggacagagtgtctcgatcaggtgggtctgttccgtaagtcgggggtg
aagtctcgtatccagtacctgcgtgacatggtggaggcggacccagagggtgcgtcttac
gagggccaatcagcattcgatgtggctgatatggtgaaacagtatttcagagatctacca
gaacctgtgttctccagcaaactctgcgagtccttcctgcatatctaccaatacttcccc
aaagaccagcagttctgtgcggcccaggcggccatcttcctcctgccagatgagcacagg
gaggccctgcagacactcctcctcttcctccgagatgtggtgggctgcgtggacgagaac
cagatgacccccaccaacatcgctgtgtgccttgccccctctctcttccacctcaacacc
ctgaaaagagagggcaatccagccaggtcgagccacaggaagtacagcctgggtaggcct
gaccaaagggacctgagtgagaacctggccgctacacagggccttgcccacatggtgaca
gagtccctacgcctccttcagcttccagagttctggccggaccagagtgtgcgcagcccc
agtgaggaggctctctgggtggatgggggtcggagttcgccctctcaagatggggaggag
gagcaggatgagagggccagactggaccagaccacccagcacctgctgagagaggccagg
gagaagagccaaggctgggagtcgtgctctggaccagaccaagtggacctggcctttaag
aaggtggatgacggctggccgctgcggttgtggaagggctccattgaggtggatgccccc
cagaaagaggccctccagcgggtcctgagggagcagggtctttgggagaagactctcaaa
cagtcggcagtagtccagaccctgacaaaggacactgagatctatcgctacctcctgcag
ggcctgggaccccgaccgccacaggagcacctcctgctcaggacctggcagtcagacccg
tcggccggacctgtttatgtgtccgctgtatctacagagcaccctgaggcccccatggag
ggggtgagagcccaggtcctctcttgtctctacctggtagaacccctaggggccaagagg
tcccgactcacacacctctgtcgcacagataccaggggccgatccaaggaatggcacaac
agagtgagtggacacctactggcctccaaccttctggccatcagagactcattcagacct
gaccacagagagaccaagatctaa
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