Salvelinus namaycush (lake trout): 120030470
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Entry
120030470 CDS
T07522
Name
(RefSeq) arginine--tRNA ligase, cytoplasmic-like
KO
K01887
arginyl-tRNA synthetase [EC:
6.1.1.19
]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
120030470
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
snh01007
]
120030470
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
snh03016
]
120030470
03029 Mitochondrial biogenesis [BR:
snh03029
]
120030470
Enzymes [BR:
snh01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.19 arginine---tRNA ligase
120030470
Amino acid related enzymes [BR:
snh01007
]
Aminoacyl-tRNA synthetase
Class I (G)
120030470
Transfer RNA biogenesis [BR:
snh03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
120030470
Prokaryotic type
Other AARSs
120030470
Mitochondrial biogenesis [BR:
snh03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
120030470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1d
DALR_1
Arg_tRNA_synt_N
tRNA-synt_1e
tRNA-synt_1
tRNA-synt_1g
Cnn_1N
ADIP
Motif
Other DBs
NCBI-GeneID:
120030470
NCBI-ProteinID:
XP_038831815
UniProt:
A0A8U0TXS0
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All DBs
Position
Sna3:complement(33657582..33670056)
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AA seq
660 aa
AA seq
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MGDPVAGYTSRLQQQELEIHSLTAELESLKNPQGLGLSSHLDGLREENAKLKYRLNVLKR
SLQEERSQCSKTMMNINQRLQEIFGEAIREAFPDLENPPLAVTPNQQAKFGDYQCNSAMA
MAQMMKSKGLKVNPRQIAENIQQNIPDNELIEKTEIAGPGFINVHLKRSFVSKLLTNLLL
NGVQPPRLESKKKVVVDFSSPNIAKEMHVGHLRSTIIGDSMCRLFEFLGYDVLRLNHVGD
WGTQFGMLIAHLQDKFPNYLTVSPPIGDLQAFYKESKKRFDEEEDFKKRAYQCVVKLQSK
DPAFIKGWNLICDVSRKEFQKVYNCLDIQIIERGESFYQEKMTAVVKEFEAKGLVEMDEG
RKIVFAPGQQIPLTVVKSDGGYTYDTSDLAALRQRLFDEKADIIIYVTDSGQGTHFQVVF
AAAQMIGWYDPNVTRVEHAGFGVVLGEDKKKFKTRSGDTVRLMDLLDEGLKRSMEKLKEK
DRDKVLSTEDLTKAQRSVAFGCIKYADLSHNRINDYVFSFDKMLDDRGNTAAYLLYAFTR
IRSIARLANIDEAALRKAAETTEVLLEHDKEWKLGKCLLRFPEILQKILDDLLLHTLCDY
LYELATTFTEFYDSCYCIEKDRQTGEVVKVNMWRMLLCDATAAIMAKGFDILGINPVSRM
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgggagatcctgtggctggttacacgtcccgacttcaacagcaggagctggagatccat
tccctgactgcagagctcgagagcctgaagaacccacagggcctgggcttgtcctcacac
ctggatgggctgagagaggagaatgccaagctcaaataccgcctcaatgtcctcaaaagg
agtctgcaggaggagaggagccagtgcagtaaaaccatgatgaacatcaaccagcgcctg
caggagatctttggggaggccatccgggaggccttccccgacctggagaaccctcccctg
gccgtcacccccaaccagcaggccaagtttggggactaccagtgtaacagcgctatggcc
atggcccagatgatgaaatcaaagggcctgaaagttaaccccaggcagatcgctgagaat
attcagcagaacattcctgacaatgagctcattgagaagacagaaattgctggaccaggg
ttcatcaatgttcaccttaagagatcgtttgtgtccaaactgctgaccaatctgctactc
aacggtgtccaacctcctcgcttagagagcaagaagaaggtggttgtggacttctcatct
cctaacatcgccaaggagatgcacgtaggtcacctgcgctccacaatcattggggacagc
atgtgtcgtctctttgagttcctgggctacgacgtcttgaggctgaatcacgtaggggac
tggggcacccagtttgggatgctcatcgctcacctgcaagacaagttcccaaactacctg
accgtatcccctcctatcggagacctgcaggccttctacaaagagtctaagaagcgtttt
gacgaggaggaggactttaagaagagggcctaccagtgtgtggtcaagctgcagagcaaa
gacccagctttcatcaaaggatggaacctcatctgtgacgtttccaggaaggaattccag
aaggtctacaactgtctggacatccagatcatcgagagaggagagtccttctaccaggag
aagatgaccgccgtggtcaaagagtttgaggccaaaggcctggtggagatggatgagggc
cgtaagatagtgtttgccccgggccagcagatccccctgacggtggtgaagtctgacggt
ggctacacctacgacacatcagacctggccgccctgcgccagcggctctttgacgagaag
gcagacatcatcatctacgtgacggacagcggccagggcacccacttccaggtagtgttt
gcagcggctcagatgattggctggtacgaccccaatgtgacacgagtggagcacgctggt
ttcggagtggtgctgggagaggacaaaaagaagtttaagactcgctccggggatacggtg
aggctgatggacctgctggacgaaggcctgaagaggtccatggaaaaactcaaggagaag
gacagggacaaggttctgagcacggaggatctgaccaaggcccagcgctcggtggcgttc
ggctgcattaagtatgccgacctgtctcataaccgcatcaacgactacgtgttctccttc
gacaagatgctagacgaccggggcaacacggccgcctacctcctctacgccttcacccgc
atcaggtccatagcccggttggctaacatcgacgaggcagcgctccgtaaagcagcagag
accacggaggtgctcttggagcacgacaaggagtggaagttgggcaagtgtctcctgcgc
ttccctgagatcctgcagaagatcctggatgacctgctgctccacacgctgtgtgactac
ctgtatgagctggccacgaccttcacagagttctacgacagctgttactgtatcgagaag
gaccgccagacaggtgaggtggtaaaggtaaacatgtggaggatgctcctgtgtgatgcc
actgccgccatcatggccaaaggcttcgatatcctgggcatcaaccctgtctccaggatg
tga
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