Salvelinus namaycush (lake trout): 120030602
Help
Entry
120030602 CDS
T07522
Symbol
slc1a1
Name
(RefSeq) excitatory amino acid transporter 3
KO
K05612
solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter), member 1
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
120030602 (slc1a1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
snh02000
]
120030602 (slc1a1)
Transporters [BR:
snh02000
]
Solute carrier family (SLC)
SLC1: High-affinity glutamate and neutral amino acid transporter
120030602 (slc1a1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SDF
Motif
Other DBs
NCBI-GeneID:
120030602
NCBI-ProteinID:
XP_038831954
UniProt:
A0A8U0TWN3
LinkDB
All DBs
Position
36:complement(9817121..9828259)
Genome browser
AA seq
529 aa
AA seq
DB search
MDMMGKKERRGWDFKGLLKRNWLLIATIVSVLLGIGLGVVVREYASLSHLHKQYFGFPGE
ILMRMLKLVILPLIISSMITGVAALDSEVSGKIGLRAVVYYFSTTIIAVILGIVLVMTIK
PGVSQEAEHIDRTGITPNVTTVDTLLDLVRNMFPENLLQACFQQYKTKRKELEPPKVKGN
TTITMFPPLSTAVMATIFPPENITKDYKIVGSYSDGINVLGLIVFCVAFGLVIGKMGERG
RILLEFFDALNEATMRLVQIIMCYMPVGILFLIAAKIIEVEDWEIFRKMGLYMVTVLSGL
AIHSTICLPLIYFAIVRKNPYTFTLGMAQALVTALMISSSSATLPVTFRCAEENLRIDKR
ITRFVLPVGATINMDGTALYEAVAAIFIAQLNDYSLDVGQIVTISITATVASIGAAGVPN
AGLVTMVIVLTAVGLPANDVTLIVAVDWLLDRFRTMINVLGDAYGAGIVQKLSRRELERM
DVTSDVDVTNPFVLETTLDDEECEKKSYVNGGFTIDKTDAISFTETSQF
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atggacatgatggggaagaaagaacgcaggggctgggacttcaaaggcttgctgaagagg
aactggctgcttattgcgaccattgtgtcggtgctgttagggataggtcttggggtggtg
gtcagggaatatgcctccctctcccaccttcataagcagtattttggcttcccgggagag
atcctgatgcggatgctcaagctggtcatcctgcccctcatcatctccagcatgataaca
ggagtcgccgccctggattcggaagtttctggaaagataggtttgagggctgtggtgtat
tacttctccaccaccatcatcgcagtcattctgggtattgtattggtgatgaccatcaaa
cctggtgtctctcaggaggccgaacatatcgacaggacagggatcacaccaaacgtcacc
actgtcgacactctactggatcttgtcagaaacatgtttcctgaaaacctactgcaggct
tgtttccaacagtacaagacaaagcgcaaagagctggaaccacctaaagtgaaggggaac
actacaattacaatgttccctcctctctctaccgctgtcatggcaaccattttcccccca
gagaacatcaccaaggactataagatagtcgggtcatattctgatgggatcaacgtgctg
ggcctcatcgtgttttgtgtggcgttcggccttgtcatcggcaagatgggcgaaagggga
cgcattctgctggaattctttgacgctttaaacgaggccaccatgaggctagtccagatt
atcatgtgctacatgccagtggggatactcttcctcatagctgccaagatcatcgaggta
gaagactgggagatcttcagaaagatgggcctgtacatggtgacagtgctgagtggccta
gctatccactccaccatttgtctgccgctgatctactttgccattgtgaggaagaaccca
tatacctttaccttagggatggcccaggcactggtcactgctcttatgatctcttccagc
tctgccaccctgccggtcaccttccgctgtgccgaagagaacctccggatcgacaagagg
atcacccgcttcgtgctgcctgtgggtgccactatcaacatggatggcacggctctctac
gaggcggttgctgcaatcttcattgcccagctcaacgactactctctggatgtgggtcag
attgtcaccatcagtataacagcaacagtagccagcatcggagctgccggtgtgcctaac
gctggacttgtcaccatggtgattgtgctgactgccgttggactacctgcaaatgatgtc
actttaattgttgctgtggattggctactagaccgcttccgcaccatgatcaacgtgctg
ggggatgcctacggagctggcatcgtccagaagctgtccaggcgggagctggagaggatg
gacgtcacctcggacgtggacgtgaccaaccccttcgtcctggagaccacgctggacgac
gaggagtgtgagaaaaagtcttatgtcaacggcggcttcaccatcgacaagaccgacgcc
atctccttcaccgagacttcacagttttag
DBGET
integrated database retrieval system
