Salvelinus namaycush (lake trout): 120030618
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Entry
120030618 CDS
T07522
Name
(RefSeq) protein transport protein Sec24D-like
KO
K14007
protein transport protein SEC24
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
120030618
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120030618
Membrane trafficking [BR:
snh04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
120030618
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_BS
Sec23_helical
zf-Sec23_Sec24
Gelsolin
GDP_Man_Dehyd
Motif
Other DBs
NCBI-GeneID:
120030618
NCBI-ProteinID:
XP_038831970
UniProt:
A0A8U0PW07
LinkDB
All DBs
Position
Sna36:complement(11097249..11127425)
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AA seq
1043 aa
AA seq
DB search
MSQQGYVATPPYSQAQPGMGGYPAGFGSAPAQPLYRHYGGPPQSFPAPPTGMMKPVSSPS
GMPPPQVPSHYGSNGQQNGAHPQSYPAPPYGQPLQSPYHSMAHQGPPPAQQLTNQMGAMN
LGYGPGSMQSPQAPPTSPLTQQQFQTAPPPAMGHLPLGPHSSQMAPPQSPLAGPTMAGPQ
SMGGPPPMGGMGRPFPGPPPPGAGGFQQPGPGAAGPPGHPQQLQGQFGGQMAGPGMAGPG
MAGPGMAGPGMAGPFQGGAAQMAGPPQKKLDPDSIPSTTQVIEDDQAKRGGQVYTTNLRG
QVPPLVTTDYTVQDQGNASPRFMRCTTYSFPCTADLAKQCQVPLATIIKPFATVPKNETP
MYVVNHGETGPIRCNRCKAYMCPYMQFMEGGRRYQCGFCNCVNEVPAFYFQHLDHMGRRV
DFYERPELSLGSYEFAATLDYCKNNKPASPPAYIFMIDVSYANIKSGLVRLVCDELKTLL
DNLPREDGAESSMVKVGFVTYNKILHFYNVKSALAQPQMMVVSDTAEMFVPLLDGFLVNF
QESRAVINNLLDQIPDMFADTNESETVFAPVIQAGVEALKAAECSGKLFIFHSSIPTAEA
PGKLKNRDDKKLINTEKEKTLFQPQKAVYEQLSKDCVSQGCSVDLFLFPSQYVDIATMGD
VATHTGGSVFKYSNFQMERDGQHFLSDLRKDVEKAIGFDAIMRVRTSTGFRATDFFGAIH
MNNTTDVEMAAVDCDKAVTVEFKHDDTLSEETGALMQCALLYTTISGQRRLRIHNLSLNC
SAQLSELYKSCETDALINFFAKSAYRAMLNQPLKTVKEILVNQAAHMLACYRKNCASPSA
ASQLILPDAMKVFPVYLNSLLKTGPLVGSAELSTDDRAHQRLSTTAMGVEDTQLLLYPRL
IPLHNMDVTSDVVPTPVRCSEERLTDAGMFLLENGCSLFLWLGQACPPEMIQSIFNVPSL
AHVPVDLRSLPELDNPQSKKLRSIVDSLLDQRPSSMKLMIVKQKDQSEIMFRQHLVEDKG
LHGGASYMDFLCYVHREIRQVLT
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atgagtcagcagggttatgttgccacacctccctattcccaggcccagcctgggatggga
ggctacccagccgggtttgggagcgcgcctgcccagcccctctatagacactatggggga
ccacctcaatcattccccgccccaccaacaggtatgatgaagcctgtgtcgtccccttcc
gggatgcctccgccacaggtccccagccattacggctcaaacggccagcagaacggagct
caccctcaaagctaccctgcccctccgtatggacagccacttcaatccccctaccacagc
atggcccaccagggcccgcccccagcacagcagctcaccaatcagatgggtgccatgaac
ctcggatatggtccagggtccatgcagagccctcaggcacctcccacctctcccctaacc
cagcagcaattccagactgcccctcccccagccatgggacacctacccctgggcccccac
tcatctcagatggctcccccacaatcacccctagctggtccaactatggcagggccccaa
tctatgggtggccccccacccatgggaggcatgggtaggcccttccctggcccaccccct
ccaggtgctgggggcttccagcagcctgggcctggagctgccggaccaccaggacatcct
cagcaactacaaggtcaatttggggggcagatggcaggacccgggatggcgggacccggg
atggcgggacccgggatggcgggacccgggatggcgggacccttccaaggtggggcagcc
caaatggccggcccacctcagaaaaagctggatcctgactccatccctagcacaacacaa
gtcatcgaggacgaccaagccaaacgagggggacaggtgtacactacgaacctcaggggc
caggtgcccccgctggtcaccactgactatacagtacaggaccaaggaaacgccagtcca
aggttcatgcgttgcaccacctactctttcccctgcacggctgacctggctaagcagtgc
caagttcccctggccacaatcatcaaacccttcgccacagtgccaaagaatgagactcct
atgtacgtcgtgaaccatggtgagactggcccaatccgctgtaatcgctgcaaggcctac
atgtgtccctacatgcagttcatggaaggcggccgccgctaccagtgtggcttctgcaac
tgcgtcaacgaagtgccagcattttatttccaacacctggaccacatgggcagaagggtg
gacttctacgagaggccagagctgtcgctggggtcctacgagttcgccgccaccctggat
tattgcaagaacaacaagccagccagtcctccagcgtacatcttcatgatcgacgtgtcc
tatgccaacatcaagagcggactggtcagactggtgtgtgatgagctgaagaccctgcta
gacaacctgcccagagaggatggtgctgagagctcgatggtgaaggtgggcttcgtcacc
tacaacaagatcctacatttctacaacgtgaagagtgccctggcccagccccagatgatg
gtagtatccgacacggcagagatgttcgtcccgctgctcgacggcttccttgtcaacttc
caggagtcgcgggcagtcatcaacaatctcctggaccagatccctgacatgtttgccgac
accaatgagagtgagacggtctttgcccccgtcatccaggctggggtagaggcactgaag
gcagcagaatgcagcggcaagctgttcatcttccactcctccatccccaccgccgaggcc
cctgggaaactgaagaacagggacgacaagaagttgattaacacagagaaagagaagact
ctgttccagccccagaaggctgtctacgagcagctgtccaaggactgtgtgtctcagggc
tgcagcgtggacctcttcctcttccccagccagtacgtggacatcgccaccatgggagac
gttgccacacacacaggaggctccgtcttcaagtacagcaacttccagatggaaagggat
ggacagcatttcctgagtgacctgaggaaggatgtggagaaggccatcgggtttgatgcc
atcatgagagtccgcaccagcacaggcttcagggctacagacttctttggtgccatccac
atgaacaacaccacagacgtggagatggctgccgtggactgtgacaaggctgtgacggtg
gagttcaaacacgatgacacacttagcgaggagacgggcgctctcatgcagtgtgcattg
ctgtacacgaccatcagcggccagcggcgtctgcggatccacaacctcagtctgaactgc
agcgcccagctgtctgagctctacaagagctgtgagacggacgccctcatcaacttcttc
gccaagtcagcataccgtgccatgctgaaccagcccctgaagacggtgaaggagatcctg
gtcaaccaggcggcccacatgctggcctgctacaggaaaaactgtgccagtccctccgct
gccagccagctgatcctgcctgatgccatgaaggtgtttccggtttacttaaacagcctg
ttgaagactggtcccctggtgggcagcgctgagctctctacagatgacagggctcaccag
agactcagcaccacagccatgggggtggaggatacccagctgctgctctatccacgcctt
atcccactgcacaacatggatgttaccagtgacgtggtgccaactccggtgcgctgctct
gaagagcgcctgacagatgccggcatgttcctgctggagaatgggtgctccctcttcctg
tggctgggtcaggcctgccccccagagatgatccagagcatcttcaacgtgccctccctc
gcccatgtgcccgttgacctgaggtccctaccagagctggataacccccagtctaagaag
ctgcgctccatcgttgactccttgcttgaccagaggcccagctccatgaagctcatgatt
gtgaagcagaaggaccagtctgagattatgttccgccagcacctggtagaggacaagggg
ctccacggtggagcctcctacatggacttcctgtgctacgtccaccgcgagatcagacaa
gtcctcacttaa
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integrated database retrieval system
