Salvelinus namaycush (lake trout): 120030659
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Entry
120030659 CDS
T07522
Name
(RefSeq) transcription factor Sox-19b-like
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120030659
Transcription factors [BR:
snh03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
120030659
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
SOXp
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
120030659
NCBI-ProteinID:
XP_038832025
UniProt:
A0A8U0TXZ4
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Position
Sna36:19710526..19713441
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AA seq
298 aa
AA seq
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MYSMMEHELKPAGQQQQQQHQTTQGMSPVTGNIGNSHLGSKSVCPPGGDPMDKVKRPMNA
FMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLTDAEKRPFIDEAKRLRAVHMKDYPD
YKYKPRRKTKPLLKKDNQMAKYPLSAGNLLAAAAAQGQGGSARMESYGWGPAGGYAGMQN
EALGYTQQLHRYDLSALQYPQAMTAAQTYMNGANTYSPMSYSSSSQQPSPVMSMVKPEPV
SHSPTGGPNHHRGPLQGDLRDMISMYIPGGDASDPAAQRGGYSVQQHYLSGTVPLSHI
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgtatagcatgatggaacacgagctgaagcctgctgggcaacaacagcagcagcagcac
caaacgacccagggcatgtccccggtcactggaaacattggcaactctcacctggggtcc
aaatccgtgtgccctccgggcggggacccaatggacaaggtcaaaaggcccatgaatgcc
ttcatggtgtggtccagggggcagcgccgcaagatggcccaggagaaccccaagatgcac
aactctgagatcagcaagcggttgggcgcggagtggaagctgctgacagacgccgagaag
cgacccttcatcgacgaagccaagcgcctcagggcagtgcacatgaaggattatcccgac
tacaagtacaagccacggcgcaagaccaagcccctgctcaagaaggacaaccagatggcg
aagtaccctctctccgccgggaatctgctggccgcagcggccgcgcagggccaaggtggg
agcgccagaatggagagctacggatggggcccagcgggaggttacgctgggatgcagaac
gaggccctcggctacactcagcagctgcaccgctatgacctgtccgcgctccagtatccc
caggccatgactgcagcacagacgtatatgaatggagccaacacctacagccccatgtcc
tacagcagcagctcccagcagcccagcccggtcatgtccatggtgaagccagagccagta
tcacactccccgactggtggacctaaccaccaccgcgggcctctccaaggggacctgagg
gatatgatcagtatgtacatccccgggggggacgccagtgacccggccgcccagagagga
ggctacagcgtccagcaacactatctcagtgggaccgttcccctcagtcatatctag
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