Salvelinus namaycush (lake trout): 120030695
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Entry
120030695 CDS
T07522
Name
(RefSeq) DENN domain-containing protein 4C-like isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120030695
Membrane trafficking [BR:
snh04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
120030695
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Gene cluster
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
PPR_2
DUF2464
PPR_3
PPR_long
PPR
CA109-like
Motif
Other DBs
NCBI-GeneID:
120030695
NCBI-ProteinID:
XP_038832071
UniProt:
A0A8U0PWZ2
LinkDB
All DBs
Position
Sna36:9094325..9167651
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AA seq
1982 aa
AA seq
DB search
MIEDKGHRVTDYFVVAGLTDKSTPLEQDLSETKSSGPKAPITDLAVINKSAGETVPEGFT
CMESTYSGQQANLNHGSLKSHELFLCYKRDRDKPPLIDIGVLYEGKERLIQGCEVIQVTP
YGRCANVNNSSATSQRIFITFRRAPPVQPQNSLSVTDICVIVTSKGETPPHTFCKVDKNL
NCGMWGSSVFLCYKKSVSASNSINYKAGLIFRYPEDDYESFPLSESVPLFCLPMGAKIEC
WAPNTRYPLPVFSTFVLTNSSGEKMYGAAIQFYEAYPIDLLSEKQKVQLGLLTTVEKKMI
PNRTVNTNKCICLLSRWPFFESFRKFLMFLYKLSVSGPHPLPIEKHISHFMHNVSFPSPQ
RPRILVQLSAHDTLMLAQPVCTPLPLSGADYSTLLMNLGPENCATLLHFVLLESKILLHS
LRPAVLTGVAEAVVAMIFPFQWQCPYIPLCPLSLAGVLNAPFPFIVGVDSRYFDLYDPPP
DVVCVDLDTNTIYLSDEKRHSNWKNLPKKPCKSLFNSLANLHHQLGIVRRTAQEGLAVEM
TPIEADFTWHKKMTSLEMEIQEALLRFMANILKGYRSYLKPITQAPSEKATSADSLYDLQ
GFLRSRERTHQKFYSQLTKTQIFIRFIEECTFVSDKDTGLAFFDDCIEKLFPSDKGNDKG
TKVEGESSEDTKLMELDESQKSEHTVFVMPPEPPATEEGSDPPSHYSYKSFPRLCMDLFD
RPREVTPALRSSTPGASLSSSPALLAKRTKQEIKLAYKMAKRFYSNPPLWAKCLFSHCYS
LWFICLPVGVRLAQSKSWAMQQAYNVLLKMRTSEVEVLDEVCYRVVMQLCGVYGQPVMAV
RVLVEMKKAGVHPNAITYGYYNKAVLEGPWPSRNRSGLFMWAKVRIVARALSQFKQAVQR
TPAMEGPTVITTGSDLGPSVCGSASSDGDRLSHGSADSSSEANGEDHTLFARSLIIGDAA
DNHCSGGVQSDQGYGSKDELHQDLVDLAQSAALVIAVDQCSKSTAQHNGGDIAGSVDSAV
AVAEPPSPVKALPHVPSIVKLSTGTSFDTAMKRGDTAPGKLFSLRSQSEDISLPVEGKSA
APGGSGVAGPAVQVQRQKAFSERSCSFSAESRAGMLMEKHGVDHIVSRMGADARILAAAL
SGGGTTPPPTKPLPSAAKALFKDLELESEEGRGPMLGKLSEEGPVTDPTPLEEGLGKEEK
RMKGDRKEAGGEDEMGLKLEEEDEERDSVGRGSISLPTLEIKEVQVGADPLSLLVSEHEE
LASVTSQELPQSLPAVVSRNLADEIEMYMSLRSPLGPKSCSMELHQEGQGGDPSPDAAPV
KQPLERRSSLPVPPVQHPGGSSGDTMPKRSPAAVTRSKTFAVKASRSPASSRGVVASPRS
LVRSSQSGSLGSVINSISGMKMDTLLSGPKMDVLKSGMKQAGNLASKVWGAVASAYSYSD
DEDELGPGYRERDSFPAGLDESMLLGGGGSDSPTHRGPTQGLVSNGLTQSSTSLGSSSGS
SDTGRGPHSTHVTPGRPGRGPDSERSDQGSHHTSSSSIYQNCALEVLMSSCSQCRSCECL
VYDEEIMAGWTADDSNLNTTCPFCRTAFLPLLHVEFHDLRTTTSFYLNPSASGDSIHSTS
HQATATGSTENKVGAAVDTPTPGLISFPESEDPGEAPASQTATHKRSSVFALSCLYVWPS
VSLIPEPAQSDPLGLLEHQAGKRGTSLTRSNSVGGPLQSLVAQREPGHSVSTTSLPCSLT
EMDGLGQKRPNPMPVSVPYLSPLVLRKELETLLENEGDQVIYTHKFLSQHPIIFWNLVFY
FQRLDLPSYLPGLILTSEHCNNGVQLHQTSLSQDSKQVYVQLLWDNINLHQEPGDPLYQS
WRTLMEKKGTLAPTDYQETRTLLNSIVRSIQTNDVYGPINLLLREVKRNPEVKRQRGIYR
EILFLALVALGRENIDVEAFDREYRRAFDELSPEQLKALHKIDRPPNTNVQWCLKCFGAP
VI
NT seq
5949 nt
NT seq
+upstream
nt +downstream
nt
atgattgaggacaagggccaccgtgtgaccgactactttgtggtggccgggctgacggac
aagtccacgcccctggagcaggacctgtcggagaccaagtccagcgggcccaaggcgccc
attactgacctggccgtcatcaacaagtcggcgggagagactgttcccgagggcttcacc
tgcatggagagcacctacagcgggcagcaggccaacctcaaccacggcagccttaagagc
cacgaactgttcctctgctacaagagggaccgcgacaagcccccgctcatcgacatcggg
gtgttatacgaagggaaggagcgtctcatccagggctgtgaggtcattcaggtcacgccg
tacggccgttgtgccaacgtcaacaacagctctgccacctcgcagcgcatcttcatcacc
ttccgccgcgcgccgcccgtccagccccagaactccctgtccgtcaccgacatctgcgtc
atcgtcactagcaagggcgagacgccgccgcacaccttctgcaaggtggacaagaacctc
aattgtggcatgtggggctccagtgttttcctgtgctacaagaaatcagtgtccgcgtcc
aactccatcaattacaaagccggcctcatcttccgctacccagaggatgactatgagtca
ttccccctgtctgagtctgtgcccctgttctgcctccccatgggggctaagatcgagtgc
tgggcccccaacacacgctaccctctgcccgtcttctccacctttgtgttaaccaactcc
tctggggaaaagatgtacggcgcagccatccagttctacgaggcctaccccatagatctc
ctcagtgagaagcagaaggtgcagctgggcctgctcaccaccgtggagaagaagatgatc
cccaaccggacggtcaacaccaacaagtgcatctgcctgctctctcgctggcccttcttc
gagtctttccgcaagttcctcatgttcctctacaagctgtccgtctcgggtccccacccg
ctgcccatcgaaaagcacatctcgcacttcatgcacaacgtgtccttcccttcacctcag
aggcccagaatcttggtccaactctctgcacacgacaccttgatgctcgcacaacctgtg
tgtactcctctccctctcagtggggcagactacagtacgttgctgatgaacctgggcccg
gagaactgtgccacgctgctgcactttgtcctgctggagagtaagatcctgcttcactcc
ctgagacccgctgtactcaccggggtagcagaggccgtagtggcgatgatcttcccgttc
cagtggcagtgcccgtacatccccctctgcccgctctccctggcgggggtcctcaatgcc
ccctttcccttcatcgtgggcgtggactcccgctactttgacctttatgaccccccgccg
gacgtggtctgtgtggacctggacaccaacactatttacctgtctgatgagaagagacac
agtaactggaaaaacctcccaaagaaaccctgcaagagcctgtttaactcactggccaac
ctgcaccaccagctgggcattgtgcgtcggacagcccaggagggcttggcggtggagatg
acccccattgaggcggacttcacctggcacaagaagatgacctccctggagatggagatc
caagaggccttgctgcgcttcatggccaacatcctgaagggctaccgctcttacctcaaa
cccatcacccaggccccctccgagaaggccacctccgcagactcactatacgacctacag
gggtttctgaggagcagggagcgcacccaccagaagttctactcccagctgaccaagact
cagatcttcatccgcttcatcgaggagtgcacgttcgtcagcgacaaggacacgggcctg
gccttcttcgacgactgcattgagaagctatttccctccgataaaggcaacgacaaaggc
actaaggtggagggtgagtcctcagaggacaccaagcttatggaactagacgaatcacag
aagagcgagcacactgtcttcgtcatgcccccagaaccccccgccaccgaggaagggtcc
gaccccccttcccactacagttataagagttttcctcggctgtgtatggacctgtttgac
cgccccagggaggtgacaccagcgctgaggagtagtacacctggggccagcctgtccagc
agccctgcactactggccaagaggaccaagcaggagatcaagctggcctacaagatggcc
aagcgcttctactccaaccctccgctgtgggccaagtgtctgttcagccactgctacagc
ctgtggttcatctgtctgcccgtgggggtgaggctggctcagtccaagagctgggccatg
caacaggcctacaacgtcctgctcaagatgaggacctctgaggtggaggtgctggatgag
gtgtgttaccgtgtagtgatgcagctgtgtggtgtgtacggtcagcctgtcatggccgtc
cgtgtcctggtggagatgaagaaggcaggggtgcaccctaacgctatcacctacggatac
tacaacaaggctgttctggaaggcccctggcccagtcggaaccgcagtgggctcttcatg
tgggccaaggtgcgcatcgtggcgcgcgctctctctcaattcaaacaggcagtccagcgg
acgcccgccatggaaggacccaccgtcatcacgacaggaagtgatttaggcccgtcagtg
tgcggctcggcgagcagcgacggcgaccggctgagccacgggagtgcagacagctccagc
gaggcgaacggagaggatcataccctgttcgcacgcagcctcatcataggagacgccgca
gacaaccactgcagcggaggagttcagtctgatcaaggctacggctctaaagatgagttg
caccaggacctagtggatttggctcaatcagcagcccttgtaatcgctgtggatcagtgc
agcaagtccacagcacagcacaacggtggggacatagctggctcggtggacagtgcagtg
gctgtagcggagccccccagccctgtgaaagcactcccacatgtccctagcatcgtcaaa
ctgtccacaggaacgagttttgataccgccatgaagagaggagacactgcccctgggaag
ctgttctctctgcgtagccagagcgaggacatctccctgccggttgagggtaagtctgca
gctccaggtggctccggggtggcgggacctgcggtccaggtccagcgccagaaggccttc
tcggagcgcagctgcagcttcagcgccgagagccgtgccggcatgctgatggagaaacat
ggtgtggaccacatcgtcagccgcatgggcgccgatgcacggatcttggcggcggctctc
tctgggggcggcaccacccccccgcctacaaagccgcttcccagtgcggccaaagccctc
tttaaggacctggagttggagtctgaggaggggcggggtccgatgctggggaaactgtca
gaggaggggccagtaacggacccaaccccactggaggaggggctagggaaagaggagaag
cggatgaaaggtgacaggaaggaggcaggaggggaggatgagatgggtctaaagttggag
gaggaagatgaggaaagagattcagtggggaggggctctatttctctgccaaccttggag
attaaggaggtgcaggtaggggcagaccccctctccctccttgtctcggagcacgaggag
ttagcctccgtaaccagtcaggagctgccgcaatccttgcctgccgtggtgtcccgaaac
ctggcagacgagattgagatgtacatgagcctacggagcccgcttggccccaaatcctgt
agcatggagctccaccaggagggccagggaggggacccttccccggatgctgccccagtg
aagcaacctctagaacggaggtccagcctccccgtgccccctgtccaacacccagggggg
tcaagcggggacacgatgcctaaacgcagccccgcagcagtcacacgctccaagaccttc
gccgtgaaggcctccaggagccctgcctcttccaggggtgttgtggccagcccaaggtcg
ctggtgaggtcgtcgcagagcggttcgctggggtcggtcatcaactctatctcgggcatg
aagatggacaccctgctctcgggtcccaagatggacgtgttgaagtcaggcatgaagcag
gcagggaacctggccagcaaggtgtggggggctgtggcctcagcctactcttactccgac
gacgaggatgaactgggccctggctatagggaaagggacagtttccctgccgggctggat
gagtccatgctgttggggggtggaggaagtgacagtcccacccacagagggcccacccaa
ggcctggtgtccaacggcctgacccagagcagcaccagcctgggcagcagcagtgggagc
agcgacacagggagaggaccccactccacacacgtgactccaggaaggccaggcagaggt
ccagactctgagaggtcagaccaaggctcccaccacaccagctcctctagtatctaccag
aactgtgcccttgaggtgctgatgtccagctgctcccagtgtcgatcctgtgagtgtctg
gtatacgatgaggagatcatggcgggctggacggcagacgattccaacctcaacaccacc
tgtcccttctgccgcaccgccttcctgcccctgctccacgtcgagttccacgacctgcgc
accaccacatcgttctacctgaaccccagcgcatcaggagacagtatccacagcaccagc
caccaggccacagctacaggctccaccgagaacaaggtaggggctgcagtggataccccg
acccctggcctcatcagcttcccagaatctgaggacccaggagaggccccggccagccag
actgccacgcacaagagatcctctgtctttgccctctcctgtctgtatgtctggccgtcc
gtcagtttgataccggagccggctcaatcggatcccctgggcctgctggagcaccaggca
gggaagagggggacgtctctgacacgcagcaacagtgtgggcgggcctctacagagcctg
gttgcccagagagaaccaggacacagcgtgtccaccaccagcctgccctgcagcctgaca
gagatggatggcctgggacagaagcggcccaacccaatgccggtgtctgtgccctacctc
agccccctggtcctccgcaaagaactagagaccctactggagaatgagggagaccaagtc
atctacacccacaagttcctgagccagcaccccatcatattctggaacctggtgttttat
ttccaacgcctggacctgcccagctacctgcctggtctcatcctcacctcggaacactgt
aacaatggagtacagctccaccagacatccctgtctcaagacagtaaacaggtgtatgtt
cagctgctgtgggacaacatcaatctgcaccaggaacctggggatcccctctaccagagc
tggaggaccctgatggagaagaagggcaccctggcccccacggactaccaggagacacgg
accctcctcaacagcatcgtccgcagcatccagaccaatgacgtctacggccccatcaac
ctgcttctccgggaggtcaagaggaacccagaggtcaaacgccaaaggggtatctacagg
gagatcctcttcctggcgctggtggcattgggacgggagaacattgacgtcgaggctttt
gaccgtgaataccgccgggcctttgatgagttgagcccagagcagctcaaggccctgcac
aagatcgaccggccacccaacaccaacgtccagtggtgcctcaagtgcttcggtgctcca
gtcatctga
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