Salvelinus namaycush (lake trout): 120030822
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Entry
120030822 CDS
T07522
Name
(RefSeq) nucleoporin SEH1-like
KO
K14299
nucleoporin SEH1
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03013
Nucleocytoplasmic transport
snh04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120030822
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
120030822
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
snh03019
]
120030822
04131 Membrane trafficking [BR:
snh04131
]
120030822
Messenger RNA biogenesis [BR:
snh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
120030822
Membrane trafficking [BR:
snh04131
]
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
120030822
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40
Beta-prop_WDR5
WD40_Prp19
Beta-prop_IFT122_1st
Beta-prop_WDR3_1st
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR3_2nd
WDR90_beta-prop_4th
WD40_MABP1-WDR62_2nd
WDR55
EIF3I
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
ANAPC4_WD40
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_TEP1_C
Beta-prop_IFT140_1st
Motif
Other DBs
NCBI-GeneID:
120030822
NCBI-ProteinID:
XP_038832208
UniProt:
A0A8U0PWM6
LinkDB
All DBs
Position
37:complement(29905645..29916041)
Genome browser
AA seq
357 aa
AA seq
DB search
MFVARSIAADHKDLIHDVSYDFHGRRMATCSSDQSVKVWDKSESGEWHCTASWKTHSGSV
WRVTWAHPEFGQVLASCSFDRTAAVWEEIVGESNDKQRGQSHWIKRTTLVDSRTSVTDVK
FAPKHMGLMLTTCSADGVARIYEAPDVMNLSQWSLQHEISCKLSCSCISWNPSSSRAHPP
MIAVGSDDSNVMYGGKVQIYEYNENTRKYAKAETLMTVTDAVHDIAFSPNLGRSFHVLAI
ATKDVRIFKLVPLRKESSSTGPTKFEVQIVAQFDNHNSQVWRVSWNITSTLLASSGDDGC
VRLWKANYMDNWKCTGILKGDGSPVNGSSGQPGAMNTMVGSTVQTSQNALNGSAAGR
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtggctcgtagcattgcagcagatcacaaagatctaatccacgatgtttcctac
gattttcacggccggagaatggcaacttgttcaagtgaccaaagtgtcaaggtttgggac
aagagtgaaagtggggagtggcactgcactgccagctggaagacacacagcgggtcagta
tggagggtgacctgggcccaccctgagtttggacaggtgctggcctcctgctccttcgac
cgaacagccgctgtgtgggaagagatagttggggaatctaacgacaaacagagggggcag
agccactggataaagaggacgactctggtggacagcaggacgtcggtgacggacgtgaag
ttcgctcctaaacacatgggtctgatgctgacgacgtgctcagcagacggggtggcgagg
atctacgaggctccagacgtgatgaacctcagccagtggtccctgcagcacgagatctcc
tgtaaactcagctgctcctgtatctcctggaacccctccagctcccgcgcccaccctccc
atgatagcagtgggaagtgatgacagcaacgtgatgtacggtgggaaggttcagatctac
gagtataatgaaaacactaggaaatatgcgaaagccgagacattgatgaccgtgactgat
gcagtgcatgacatagccttctcccctaacctggggcggtccttccatgtgctcgccata
gcaaccaaagatgttcggatctttaagttggtacctttgcgtaaggagagcagctcaaca
ggccctactaaatttgaggttcagatcgtggcccagtttgacaaccacaactcccaggtg
tggagagtctcctggaacatcaccagcaccttgctggcctcctcaggagacgacggctgt
gtccgactctggaaagccaactacatggacaactggaagtgtaccggcatcctgaaggga
gacgggagtccagtcaacgggtcgtcaggacaacccggtgccatgaataccatggtgggg
tccactgtccagacctcccagaatgcactgaacggctctgctgcaggaaggtag
DBGET
integrated database retrieval system