KEGG   Salvelinus namaycush (lake trout): 120030822
Entry
120030822         CDS       T07522                                 
Name
(RefSeq) nucleoporin SEH1-like
  KO
K14299  nucleoporin SEH1
Organism
snh  Salvelinus namaycush (lake trout)
Pathway
snh03013  Nucleocytoplasmic transport
snh04150  mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:snh00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    120030822
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    120030822
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:snh03019]
    120030822
   04131 Membrane trafficking [BR:snh04131]
    120030822
Messenger RNA biogenesis [BR:snh03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     120030822
Membrane trafficking [BR:snh04131]
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    120030822
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40 Beta-prop_WDR5 WD40_Prp19 Beta-prop_IFT122_1st Beta-prop_WDR3_1st Beta-prop_EML_2 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_RIG_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_2nd WDR90_beta-prop_4th WD40_MABP1-WDR62_2nd WDR55 EIF3I Beta-prop_EIPR1 Beta-prop_TEP1_2nd ANAPC4_WD40 Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_WDR35_TULP_N Beta-prop_TEP1_C Beta-prop_IFT140_1st
Other DBs
NCBI-GeneID: 120030822
NCBI-ProteinID: XP_038832208
UniProt: A0A8U0PWM6
LinkDB
Position
37:complement(29905645..29916041)
AA seq 357 aa
MFVARSIAADHKDLIHDVSYDFHGRRMATCSSDQSVKVWDKSESGEWHCTASWKTHSGSV
WRVTWAHPEFGQVLASCSFDRTAAVWEEIVGESNDKQRGQSHWIKRTTLVDSRTSVTDVK
FAPKHMGLMLTTCSADGVARIYEAPDVMNLSQWSLQHEISCKLSCSCISWNPSSSRAHPP
MIAVGSDDSNVMYGGKVQIYEYNENTRKYAKAETLMTVTDAVHDIAFSPNLGRSFHVLAI
ATKDVRIFKLVPLRKESSSTGPTKFEVQIVAQFDNHNSQVWRVSWNITSTLLASSGDDGC
VRLWKANYMDNWKCTGILKGDGSPVNGSSGQPGAMNTMVGSTVQTSQNALNGSAAGR
NT seq 1074 nt   +upstreamnt  +downstreamnt
atgtttgtggctcgtagcattgcagcagatcacaaagatctaatccacgatgtttcctac
gattttcacggccggagaatggcaacttgttcaagtgaccaaagtgtcaaggtttgggac
aagagtgaaagtggggagtggcactgcactgccagctggaagacacacagcgggtcagta
tggagggtgacctgggcccaccctgagtttggacaggtgctggcctcctgctccttcgac
cgaacagccgctgtgtgggaagagatagttggggaatctaacgacaaacagagggggcag
agccactggataaagaggacgactctggtggacagcaggacgtcggtgacggacgtgaag
ttcgctcctaaacacatgggtctgatgctgacgacgtgctcagcagacggggtggcgagg
atctacgaggctccagacgtgatgaacctcagccagtggtccctgcagcacgagatctcc
tgtaaactcagctgctcctgtatctcctggaacccctccagctcccgcgcccaccctccc
atgatagcagtgggaagtgatgacagcaacgtgatgtacggtgggaaggttcagatctac
gagtataatgaaaacactaggaaatatgcgaaagccgagacattgatgaccgtgactgat
gcagtgcatgacatagccttctcccctaacctggggcggtccttccatgtgctcgccata
gcaaccaaagatgttcggatctttaagttggtacctttgcgtaaggagagcagctcaaca
ggccctactaaatttgaggttcagatcgtggcccagtttgacaaccacaactcccaggtg
tggagagtctcctggaacatcaccagcaccttgctggcctcctcaggagacgacggctgt
gtccgactctggaaagccaactacatggacaactggaagtgtaccggcatcctgaaggga
gacgggagtccagtcaacgggtcgtcaggacaacccggtgccatgaataccatggtgggg
tccactgtccagacctcccagaatgcactgaacggctctgctgcaggaaggtag

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