Salvelinus namaycush (lake trout): 120030901
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Entry
120030901 CDS
T07522
Name
(RefSeq) adhesion G protein-coupled receptor B1-like
KO
K04596
adhesion G protein-coupled receptor B1
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04115
p53 signaling pathway
snh04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
120030901
09143 Cell growth and death
04115 p53 signaling pathway
120030901
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
snh01002
]
120030901
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120030901
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
snh04030
]
120030901
Peptidases and inhibitors [BR:
snh01002
]
Mixed peptidases
Family P2
120030901
Membrane trafficking [BR:
snh04131
]
Endocytosis
Phagocytosis
Others
120030901
G protein-coupled receptors [BR:
snh04030
]
Adhesion receptor family
Brain-specific angiogenesis inhibitor (BAI)
120030901
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AGRB_N
7tm_2
TSP_1
TSP1_spondin
GAIN
TSP1_ADAMTS
TSP1_CFP_C
GPS
HRM
TSP1_CCN
Motif
Other DBs
NCBI-GeneID:
120030901
NCBI-ProteinID:
XP_038832338
UniProt:
A0A8U0TXS1
LinkDB
All DBs
Position
Sna37:21000109..21069624
Genome browser
AA seq
1590 aa
AA seq
DB search
MMTTLLSSLPGHLVNPQVPLPSSLLLLLLIQLFSQCPAAPSGPESDTCSTLVQSRFFGHF
LSSSTFPTAPCSWTLQNPDPRRYTIFIKVTKPTATTDCIPRQLRTFQFDSFLETTRTYLG
MESFDEVVKLCESSSPVAFLEAGKQFLQMRKGPPRAGVTVTTSNPGEDGEFKTEYLVVGK
RNPSMAACQMLCQWLEDCLASSTSNRPCGIMQTPCQCWEPPPPPQLSEGDGCYRNGFYLE
NCLPSANEKRSGHGITGGWSVWAEWAECSSDCGGGVQTRSRTCQSPPEETYLCEGVVEEG
RPCNPQPCSGKGRHLTRSQSLRSVDSRKRDGGGGEVDKTRGGGGGQQAPQTVDQAASGEE
WSSWSVCSATCGESWQSRTRFCVSSSYSTQCSGPLREQRPCNNSAVCPVHGTWDEWSPWS
LCSSTCGRGYRDRTRSCKPPQFGGDPCMGPEKQTKFCNIAVCPGESVDGVWNEWANWGSC
SASCSNGTMQRIRECNGPSYGGSECRGEWIETRDCFLRECPVEGKWHPWTSWVGCTKTCG
GGSQQRQRICYGPFFGGENCPGDREEVRHCNEKRCPEPHEICAEENFSNVVWKMTPAGDT
AAVRCPPNANGLILRRCTLDDEGIAYWENPTYMKCISNDYRSIQTLTREHLSKAQRGLVG
DGVSEVMTKLRVTSSDGTSYSGDLLAIVDVLKNMTEIFRRAYNSPSNADMRNFVQSVSNL
LMEENRERWEEAQLLGPNIKELFRLVEDFVDVYGLRMKDFQDMVEVTDNLVLSIHKRPVA
GNADISFPMKGWKGMMDWARSSEDRVTVSKNILSTGKPDTDDLSAFVTGIVLYRNLGSIL
SLQRNSTVLNSKVVSVTIKPTPGSLSTPVEVQFSHLYNGTTNQTCISWDESDRPTSKISS
LLGSWSARGCRAVPVDSLRTKCVCDRLSTFAILARLNPDMNMDKMQLPSVTLMVGCGVSS
LTLLLLIIIYVSVWRYIRSERSVILINFCLSIISSNALILIGQTQTQNKVICTLVAAFLH
FFFLSSFCWVLTEAWQSYMAVTGRLRNRIIRKRFLCLGWGLPALVVAVSVGFTKAKGYGT
VNYCWLSLEGGLLYAFVGPAAAVVLVNMVIGILVFNKLVSKDGITDMKLKERAGASLWSS
CVVLPLLALTWMSAVLAITDRRSSLFQILFAVFDSLEGFVIVMVHCILRREVQEAVKCRV
VDRQEDGNGDSGGSFQNGHAQLMTDFEKDVDMACRGGTLKRSSLQGDEKPSSQPLTLQKG
SNFNTMPASMAKVHLQNVADYPSHTLTLRREKGGATKGISTELPGAKSIYICDGELFKQL
DGELSPRGTGEAGGPEGTGPGYIILPNNNNTGTLGRPGKGSKEDTTAKYNISIEQQMPQT
RLIHLANSAGMEGVPGFALKSLPADLVSVSCSERESPVHNMQNVSGESHMTNSMCEQGDS
GNSGMMSMSETVSTLSMSSLERRKSRYAELDFEKIMHTRKRHQDMFQDLNRKIHSADQDR
ASPPGDGKAGKRWSVSSAGSDKTIMSDKQQTPSKRAWEGIRKTQSPPSWMRKDLEPLAAS
PLELQNVEWEKASATIPLVGQEIMDLQTEV
NT seq
4773 nt
NT seq
+upstream
nt +downstream
nt
atgatgaccactcttttgtcctccttacctgggcacctggtgaacccccaagtccccctg
ccatcatcgttgctgcttctgctgctgatacaactgtttagtcagtgcccggctgctccc
tcagggcctgagtcagacacctgctccactctggtccagagccgattcttcggccacttc
ctgtcctcctccactttccccacggcaccctgctcctggaccctgcagaacccagacccg
cgccgctacaccatctttatcaaggtaaccaaacctaccgccacaacggactgcattccc
cggcagctccgcacattccagtttgactcgtttctggagaccacgcgcacctacctgggg
atggagagcttcgacgaggtggtcaagctgtgtgaatcttcatcccctgtggcctttctg
gaggctgggaaacagttcctacaaatgaggaaagggccgccccgggccggcgtgacggtc
accacctctaaccctggcgaagatggggaatttaagacagagtacctggtggtggggaag
cgtaaccccagcatggcagcgtgtcagatgctgtgccagtggctggaggactgcctggca
tccagcacctctaacaggccctgtggtatcatgcagaccccctgccagtgctgggagccc
cctcctcctccacagctcagcgagggggatggatgctacaggaacgggttctatctggag
aactgcctacccagcgccaatgagaagagatctgggcatggtattaccggtggctggagt
gtgtgggcggagtgggcggagtgcagcagtgactgtggtggtggtgttcagacccggagc
cgtacctgtcaatctcccccagaggagacatacctgtgtgagggagtagtggaggagggg
aggccctgtaaccctcagccctgcagtggcaaaggccgtcatctcactcgcagccaatca
cttcgctccgtggacagccgcaagcgcgatggcggcggtggcgaggtagacaagacacga
ggcggtggcggcggacagcaggccccacagacagtggaccaggctgcgtcaggtgaggag
tggtcgtcgtggagtgtgtgttcggccacatgcggtgagagctggcagagccgcacgcgt
ttctgtgtctcctcctcctacagcacccagtgcagcggcccgctccgagagcagaggccc
tgcaacaactctgccgtctgtccagtgcatgggacttgggatgagtggtcgccatggagc
ttgtgttcgtcaacctgcggccgtggttaccgggatcgcacacgcagctgcaaaccccct
cagtttgggggagacccctgtatggggccggagaagcagaccaagttctgcaacatcgct
gtctgcccaggtgagtcagttgatggggtgtggaatgagtgggctaattggggttcatgc
tctgcgtcctgctccaacgggaccatgcagcggatcagggagtgtaacggaccttcgtac
ggaggatcagagtgtcgcggggagtggatagagaccagagactgcttcttacgggagtgc
ccagtggaggggaagtggcatccttggacgtcgtgggtgggctgcaccaagacatgtggt
ggggggagccaacagagacagaggatttgctatgggcccttctttgggggtgaaaattgt
cctggagatcgagaggaggtgcgacactgcaatgagaagcggtgtccagaacctcatgag
atctgtgcagaggagaacttctccaacgtagtgtggaaaatgactccagcaggggacaca
gcggccgtacgctgccctcccaatgccaatgggctgatcctgaggcggtgcactctggat
gatgagggaatagcctactgggagaaccccacttatatgaagtgtatctccaatgactac
cgcagcatccaaacactgactagggaacacctgtccaaggcccagcgggggcttgtgggg
gatggagtttcagaggtgatgaccaagctcagggtgacgtccagcgatgggaccagctac
agtggagacttgctggccatagtggacgtactgaagaacatgacagagatcttcagaagg
gcttacaacagccccagcaatgcagacatgagaaactttgtccagtcagtcagtaacctg
ctgatggaggagaacagagagagatgggaagaagcacaactgttgggtcctaacatcaag
gagctgttccggttggtggaagactttgtggacgtctacggtcttaggatgaaagacttc
caggacatggtcgaggtcacggataacttagttctgtccatccataagcgtccggtggcg
ggtaatgcagacatcagcttccctatgaagggctggaaggggatgatggactgggcccgc
agctctgaggacagagttactgtttccaagaacatcctctccacaggaaagccagataca
gatgacttgtcagcgtttgtcaccgggatcgttctctacagaaacctgggcagcatccta
tctctacagagaaacagcaccgtgctcaactccaaggtggtgtctgtgaccatcaagccc
accccaggatccctctctaccccggtggaggtccagttctcacacctttacaacggcacc
acaaaccagacctgcatctcctgggacgagagtgacaggcctacaagcaagatctcatcg
ctgcttggatcgtggtctgccaggggctgcagagccgtgcctgtcgactcattgagaacc
aaatgcgtgtgtgacagactctctaccttcgccattttagcccggctaaatcctgacatg
aacatggataaaatgcagcttccctctgtgacgctgatggtgggctgtggagtctcctct
ctcaccttgctgctcctcatcatcatctatgtgtcggtctggaggtacattcgctctgag
cgctccgtcatcctcatcaacttctgcctctccatcatctcctccaacgccctcatcctc
attggtcagacacagacacagaacaaggtgatctgcacgctggtcgctgctttcctgcat
ttcttcttcctgtcgtcgttctgttgggttctgacagaggcgtggcagtcgtacatggcc
gtgactggccggctgaggaaccgcatcatccgcaagcgattcctgtgtctgggctggggt
ctacctgctctggttgtggcagtctctgtgggtttcaccaaagctaagggatatggcacc
gtcaactactgctggctgtctctggaaggtggtctgctttatgcgtttgtgggaccggct
gccgctgtagttttggttaacatggttatcgggattctcgtatttaacaaactggtgtcc
aaagacggcattactgatatgaaactgaaggagagggcaggggcgtcgctgtggagctcc
tgtgtggttctgcctctcctggccctcacctggatgtctgctgtcctggccatcaccgac
cgacgctcctccctcttccagatcctgttcgctgtgtttgattcgctggaaggcttcgtc
atcgtcatggtgcattgcatcctgcgcagagaggttcaagaggcagtgaagtgtcgggta
gtggaccgccaggaggacgggaatggagactcagggggatctttccagaacggacacgct
cagcttatgactgatttcgagaaagacgtcgacatggcttgcagaggaggtactctgaag
cgttcctctctccagggtgatgagaagccatcctcccagcccctgacccttcagaagggc
tctaactttaacaccatgcctgccagcatggccaaagtccacctccagaatgtggcagac
taccccagtcataccctcaccctgcgcagggagaagggtggcgccaccaagggcatcagc
accgagctgccgggagccaagtccatctacatctgtgacggggagctctttaaacagctg
gacggggagctgtctccacgggggacaggggaggccggggggcctgagggcacaggacca
gggtacatcatcctgcctaacaacaacaacactggcaccctggggcggcccggaaagggc
agcaaggaggacacgacggccaagtacaacatcagcatcgagcagcagatgccccagacc
aggctcatccacctggccaactcggcggggatggagggcgtcccgggtttcgcgctgaag
agcctgcctgcggacctggtcagtgtctcctgctcggagagggagtcgcccgtccacaac
atgcagaacgtctccggagaatcccacatgaccaacagcatgtgtgaacagggtgattct
gggaactctggaatgatgtccatgagcgagaccgtgtccactctctccatgagctcgctg
gagagacgaaaatctcgctatgcggagctggactttgagaagatcatgcacacacggaag
cgtcaccaggacatgttccaggacctgaacaggaagatccacagtgcagaccaggacagg
gcgtctccgcctggcgatgggaaggcagggaagaggtggagtgtgtcctcagcaggcagc
gacaagaccatcatgagcgacaagcagcagacacccagtaagagagcctgggagggcatc
aggaagacccaatctcccccgtcatggatgaggaaggacctggagcccttggcggcctct
cccctggagctgcagaacgtggagtgggagaaggccagcgccaccatccctctggtggga
caggagatcatggacctgcagacagaggtgtga
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