Salvelinus namaycush (lake trout): 120030994
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Entry
120030994 CDS
T07522
Symbol
prdm13
Name
(RefSeq) PR domain zinc finger protein 13
KO
K24645
PR domain zinc finger protein 13 [EC:2.1.1.-]
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120030994 (prdm13)
Transcription factors [BR:
snh03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
120030994 (prdm13)
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GFIT
Motif
Pfam:
zf-C2H2
PRDM2_PR
zf-C2H2_4
zf-H2C2_2
SET
zf-C2H2_7th_ZNF462
zf-BED
zf-C2H2_15
Zf-C2H2_ZNF451
C2CH-3rd_BIRD-IDD
Motif
Other DBs
NCBI-GeneID:
120030994
NCBI-ProteinID:
XP_038832429
UniProt:
A0A8U0PZ48
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Position
Sna37:3971051..3976817
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AA seq
620 aa
AA seq
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MQATRASTISVFADCSFPAGLRIGPVPGIFKLGKYVTDRKEVVTKRKIRLLRGEIVDESG
CPVPDWIGCIRAARNSQEQNLEAVSDLPGGQIFYRVLTEIPAGEELSVWYSNTLAQWYDI
PTTATPTHDEKGEERYICWYCWRIFKYPNTLKAHVHFHCALSNGRSFVNSEQARSTDSFS
RSPKSGDIPYTSASPRNGHNTSISDSVRRTVSSSPFLNKVGVSKKPSSEEQDRALDMSVT
SARNHGHLMGLGATSSMLSNMGFHPGVRSAFKPMGQSKVPTADVYREETNGKHNGLGFSK
LLGNMKSTRALNEPLTGSHPSKCVHPLDSTSPVVPCANPIRGFPLIPNFEETSAFKHVES
RMHSGLSPSRYSQMSSGFHFERFSLPQFDGVKPYNGDCNIPLMPFTVYNGELLYSSPYYP
LKFHFSNLLKYPETMSYFGAPALNQDLGSITNIDREIAMHTQQLSEIAVEKNRTRLDSMP
TANTGSGKPKKGHLCLYCGKLYSRKYGLKIHMRTHTGYKPLKCKVCFRPFGDPSNLNKHI
RLHAEGNTPYRCEFCGKVLVRRRDLERHVKSRHPGQTIKKAEDKTEGIFEDQEQKSDNDS
DVDVCFTDDQSDQESSKIDD
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgcaagcaactcgggcatccactatcagtgtgtttgcagactgcagcttcccggccggc
ctgcggataggaccggtgccgggcatcttcaaactagggaaatacgttactgatcgcaaa
gaggtcgtaaccaagagaaagattcggctgctgaggggggaaatcgtggatgaatcaggt
tgccctgtgccagactggattgggtgtatccgggcggccagaaacagtcaagaacagaac
ttggaggctgtctcagatctacctggtgggcagattttctatcgtgtgctgacggagatc
ccagcaggcgaggagctgagtgtgtggtactccaacactctggctcagtggtacgacatc
cctaccactgccactccaacacacgacgagaaaggtgaggaacgctacatttgctggtac
tgctggagaatatttaaatatcccaacacactcaaggcccacgtccatttccactgcgct
ctgagcaacgggcggagctttgtgaacagcgagcaggccaggagcacagacagcttcagc
aggtcacccaaatccggggacattccctacacctccgcctcgcccaggaacggccacaac
acctccatctcagactctgtcagacggaccgtgtcgtcctcacctttcctcaacaaagtt
ggcgtatcaaagaaacccagctctgaggagcaggacagagcacttgacatgagcgttacc
tcggccagaaaccacggacatctcatgggccttggcgcaacgtcttcaatgttgagcaac
atggggttccacccaggcgtgcgctctgcattcaagcccatgggccaatccaaggtcccc
acggctgacgtctacagagaggaaactaatgggaagcataatggactaggcttcagcaaa
ctcctggggaacatgaaatcaacgcgagccttgaatgaacctttgaccggaagccatccc
tccaagtgcgtccatccattagattctacatctcccgtggtcccgtgcgcaaaccccatt
aggggttttccgttaatacctaattttgaggagacatcggctttcaagcacgtggagagc
cgaatgcactctggactgtccccctcgcgctactctcagatgtcctctggattccatttt
gagaggttttctctgcctcagtttgatggcgtcaagccatataatggagattgcaatatc
cccctcatgccattcaccgtgtacaatggcgagctgctttatagttcaccatactaccca
ctgaaattccattttagcaatctcctaaaatacccggagacaatgtcctactttggcgca
cctgcactcaaccaagacctgggttcaataaccaacattgacagggagatagccatgcac
actcaacagttgtctgaaatagccgttgaaaagaaccgaaccaggctcgactctatgccc
actgctaacacaggctcagggaagcccaaaaagggacacttatgtctttactgtggtaaa
ctgtactctcggaaatacggactcaagattcacatgagaactcacacagggtacaaacca
ttgaagtgcaaagtttgttttcggcccttcggtgaccccagcaacctgaataagcacatc
cgtctccacgcggaggggaacaccccgtacaggtgcgagttctgtggcaaggtgctggtg
cgccggagggatttggagcgtcatgtcaaatcaaggcaccctggacaaacaataaaaaaa
gctgaggacaaaaccgagggcatattcgaggatcaagagcaaaagagcgacaatgacagc
gacgttgacgtatgcttcaccgatgaccagagcgaccaagaatccagtaaaatagatgat
taa
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