Salvelinus namaycush (lake trout): 120031008
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Entry
120031008 CDS
T07522
Name
(RefSeq) DENN domain-containing protein 4B-like
KO
K20163
DENN domain-containing protein 4
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120031008
Membrane trafficking [BR:
snh04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
120031008
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
PPR_2
PPR_3
PPR_long
DUF2464
PPR
SPA
Motif
Other DBs
NCBI-GeneID:
120031008
NCBI-ProteinID:
XP_038832450
UniProt:
A0A8U0PWX7
LinkDB
All DBs
Position
Sna37:15331485..15371946
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AA seq
1496 aa
AA seq
DB search
MTEEKCPQLVDYFVVAGLAPGGSAPLDEEGQQRGCRVVEPVTDLAVIARGLGEEVPEGFT
CIEKTQGGHPAELSAGLINNPHMYLCYRRGHDKPPILDLGVLYEGKEVVKQGWYVIETTP
YSRSASLSSGGPATHRTFLTYRRAPESQALHTLGVTDISLLLPSKGEVAPHTFCRVEKNL
NTGIWGPALYLCYKRAVAKANALVYEAGLISRYPEADVESFPLPESVPMFCLPMGVTVES
WPLNTKYQLPVFSTFVLTSASGDKVYGAAIQFYEAFPRECLSERQSVRLGLVSVVDRRPI
TNRTLQVKKSVCVLSHWPFFTVFQKFLTFVYRYSISGPHVLPLEKHISSFMHNVPFPSPQ
RPRILVQLSPYDNLLLCQPVSSPLLLSGASFVKLLQNLGPENACVLLLAVLTEHKLLLHS
LRPDVLTSVSEALVSMTFPLRWHCPYIPLCPLRLADVLCAPMPFIVGVHSSYFDLYDPPT
DVVCVDLDTNTIFQAEDKKPLSWRSLPRKQGKMLVNTLTNLMKTLEKIYTTGQEEATLEF
LLTDYDLIYGRQKQLELEIQEAFLRFMSCLLRGYRAYLLPITQAPSDRTTDCSSLFNLQG
FLKSRERTHQKFYTQLTRTQMFTQFIEECSFVSDRHACLEFFDECVQKSDVEKPEEVRLI
DLDEAHSGEHTVFIMPPEEPQEPDGSECPTHYSYETFPVLCMDLFDRPQDQLRVPTKGSA
PSSPAPRRTKQEIKLAQKRAQIYSAVPDMWSKCLLGHCYGLWFIYLPTFVRAESAKVRAL
QTAYEVLKHMETRKVVLPDEVCYRILMQLCGQYGQPVLAVRVLLEMKKAGITPNTITYAY
YNKAVLESKWPSTNQGGRLRWAKLRNVLMAVAQFRQPIRQRQKSGSVGSRTDTMDSNQRS
RPQSNLIRQSSWSGLSESSSHESLTGSMVKSNSLNSMRGSTDKSKLSMKAVLRNAGANGC
SNPASRKPPVGPRDTSTPSPFSPGGVLVRRDQVCLSTFYKDCAETAVSEPDCSCQPGDRD
GRPPGPRDTVSRKPVDENYNNVSPPSRGSLAGKLQQLLTPTRHRVSGRRAASVDARRSGG
ENGPVRRVSEQRPSRKAQVAESLLKAKERLYTATSESSLSVGSDVDLPETTNLAFPLRKS
WDTNQEGAGLEVLMSSCSLCRSCNSLVYDEEIMAGWTSDDSNLNSSCPFCSTTFVPLLNA
EICDLGPVSSLERTNWNMDEEVESAAKSPGDQGDILGHNGVSEDSSSETSSYSESSSVTM
GSSVGGSPQVTVAYLSPLVLRKELESLLENEGEAVLAQGQLLDSHSIIFWNMVWYFHRLG
LPSNLLQLVRSSPLANQLAQTSENSAVRVRLLWDTLTPDTDYWPPLYILWRIHSGVPMRN
HSWRRHNHPFTLAFLEEVLRWVGMNEVHKGITLFLETIAKQPGTPKIQRSLYREMLFLTL
AAMGRDHVAAFDKKYKAAYQRLSGSLGRGELRRKRAQPPSPKAVDCRRSFLLPLEC
NT seq
4491 nt
NT seq
+upstream
nt +downstream
nt
atgacggaggagaaatgcccccagctagtggactactttgtggtggcagggctggctcca
gggggctcggccccactggacgaagagggccagcagagagggtgtcgggtggtggagccg
gttacagacctggcggtgatcgcccggggcttgggggaggaggtgcccgagggcttcacc
tgcatcgagaagacccaggggggccacccggccgagctgagcgccggactcatcaacaac
ccccacatgtacctgtgttaccgccgtgggcatgacaagccacccatcctcgacctcggg
gtgctgtacgagggcaaagaggtggtgaagcagggctggtatgtgatcgagaccaccccc
tacagccgctcagccagcctgagctccggggggcctgccacccaccgcaccttcctgacc
taccgccgtgccccagagtcccaggccctccacaccctgggggtcacagacatctccctc
ctgctgcccagcaagggggaggtggccccccacaccttctgccgggtggagaagaacctc
aacactggcatatggggtccagccttatacctgtgctacaaaagagctgtagccaaagcc
aatgccctagtctatgaagcaggtctgatcagtcggtatccggaagcggacgtggagtcg
ttccccttgccagagtctgtgcctatgttctgtctgcccatgggtgtgacggtggagagc
tggcccctcaacaccaagtaccagctccctgtcttctctaccttcgtcctcaccagtgcc
agtggcgacaaggtttacggtgctgccatccagttctacgaggcgttcccacgggagtgc
ctctcggagcggcagagcgtccgtctgggcctggtgagcgtggtggaccggcggcctatc
accaaccgcaccctgcaagtgaagaagagcgtgtgtgttctctcccactggcccttcttc
accgtcttccagaagttcctcaccttcgtctaccgatactccatctccggaccccacgtg
ctgccccttgagaagcacatctccagcttcatgcacaacgtccccttcccctcccctcag
cggcctcgcatcctagtgcagctctccccctatgacaaccttctcctctgtcagcccgtc
tcctcccccttactgctcagtggtgccagctttgtgaagctgctgcagaacctgggccct
gagaacgcctgtgtcctgctgctggctgtgctgacggagcacaaactactgctacactcc
ctccgccccgacgtcctcacctccgtcagcgaggccctggtgtctatgacgttccctctg
cgttggcactgcccgtacatccccctgtgcccgctgcggctggcagacgtactgtgtgcc
cccatgcccttcatcgtgggcgtccactccagctactttgacctctatgacccccctact
gacgtggtgtgtgttgacctggacaccaacaccatctttcaagcagaggacaagaagccg
ttgtcatggcgatcgctaccaaggaagcaaggcaagatgctggtgaataccctcaccaat
ttgatgaagactctggagaaaatctacaccactggccaagaggaggccaccctggagttc
ctgctgacggactatgacctgatctacgggcgtcagaagcagctggagctggagatccag
gaggccttcctgcgcttcatgagctgcctgctgaggggctaccgcgcctacctgctgccc
atcacccaggccccctcagacaggaccaccgactgcagctccctcttcaacctgcagggc
ttcctgaagtctcgtgaacgcacccaccagaagttctacacccagctgaccaggacccag
atgttcactcagttcatcgaggagtgctcattcgtcagtgatcgccatgcctgtctcgag
ttcttcgacgagtgtgtccagaagtcggatgtggagaagcctgaggaggtgcgtctgata
gacctggacgaggcccacagtggggagcacacggtcttcatcatgcccccagaggaaccc
caggagccagacggttcagagtgccccactcactacagctatgagacattccctgtgctc
tgcatggatctttttgaccggcctcaggaccagctacgtgtccctaccaaggggagtgcc
cccagcagccctgccccgcgacggaccaaacaggagattaagctggcacagaagcgggca
cagatatactcggcagtgcccgacatgtggtccaaatgcctgcttggccactgctatggg
ctgtggttcatctacctgcccacctttgtgcgggcggagagtgccaaggtgcgtgccttg
caaacggcatacgaggtgctcaagcacatggagaccaggaaggtggtactaccagatgag
gtgtgttacaggatcctgatgcagctgtgtgggcagtacgggcagcctgtactcgctgtt
agggtacttctggagatgaagaaagctgggatcacacccaacaccatcacctatgcatac
tacaacaaggcagtgctggagagcaagtggccctccaccaatcagggtggccgtctgcgc
tgggccaagttgcgtaacgttctgatggccgtggcgcagttcagacagccaatcagacaa
cggcagaagagtggttcagtaggctcgcggacagatacaatggacagtaaccaacggtcc
cgcccacaatctaacctgattcgtcagtccagctggagcggcctgagtgaaagctccagc
cacgaatcgctgacggggtctatggtgaagagcaacagcctgaacagcatgagaggctca
acagacaagtctaagctctcaatgaaggcggtgctccggaacgcaggtgccaatggctgc
agcaatcctgcctcccgtaagccccccgtggggccacgagacacctccaccccttctccc
ttttcccctggtggtgtcctggtgcgccgtgaccaggtgtgcctgtccaccttctacaaa
gactgtgccgagacggccgtctctgagcccgactgcagctgccagcctggggacagagac
ggcaggccacctgggccgagagacactgtgagccgcaagcccgttgacgagaactacaat
aatgtgtcaccgccgagtcggggaagcctggcagggaaactgcagcagctgctcacacct
actcgtcatcgagtctcggggcggcgggccgccagtgtagacgcacggcgctcggggggt
gaaaacgggccggtgcgcagggtgtcggaacagaggccgtcccgaaaagcccaggtggct
gagagcctgctgaaggctaaggagaggctctacactgctacctctgagagttctctgtcg
gtggggagtgacgtcgacctccctgaaaccaccaatttggcctttcctctccgcaagtcc
tgggacaccaaccaagagggagcgggactagaggtgttgatgtcgagctgctccctgtgt
cggagctgtaactccctggtctatgacgaggagataatggccgggtggacgtctgacgac
tccaacctcaactccagctgtcccttctgctcaaccaccttcgtcccccttctcaacgct
gagatctgtgacctaggacccgtcagcagcctggaacgtaccaattggaacatggacgag
gaggtggagagcgcagccaagtcccctggtgaccagggggacatcctgggtcacaacggt
gtgagtgaggactccagctctgagaccagcagttattctgagagcagcagcgttaccatg
ggttcatcggtgggcgggtcgccccaggtgacggtggcctacctgagcccattggtgctg
cgcaaggagcttgagagcctgctggagaacgagggcgaggcggtgctggcacagggccag
ctcctggacagccactccatcatcttctggaacatggtgtggtacttccatcgcctgggt
ctgcccagcaacctgctgcagctggttcgctcctcaccgctggccaaccaactagcacag
acttcagagaactcagcagtgagggtgaggctgctgtgggacacactgacccctgacaca
gactactggccccccctctacatcctgtggaggatacacagtggcgtacccatgcggaac
cacagctggcggaggcacaaccaccccttcaccctggccttcctggaggaagtgctgcgc
tgggtcggcatgaacgaggtacacaagggaatcactctcttcctggaaaccattgccaag
caaccaggcacgcccaagatacaaaggagtctgtacagagagatgctcttcctcacgctg
gctgccatgggtagagatcacgttgctgcgtttgataagaaatacaaggctgcgtaccaa
cggctgagtggctccttgggtcgtggggagctccgcaggaagcgagcccagccacctagc
cccaaggctgtggactgcagacggagcttcctgctgcccctcgagtgctga
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