Salvelinus namaycush (lake trout): 120031086
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Entry
120031086 CDS
T07522
Name
(RefSeq) gasdermin-E-like isoform X1
KO
K22146
gasdermin-E
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
120031086
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
snh02000
]
120031086
Transporters [BR:
snh02000
]
Other transporters
Pores ion channels [TC:
1
]
120031086
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Gasdermin
Gasdermin_C
EAD2
Motif
Other DBs
NCBI-GeneID:
120031086
NCBI-ProteinID:
XP_038832587
UniProt:
A0A8U0PWX8
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Position
Sna37:27471302..27490994
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AA seq
671 aa
AA seq
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MFASATENFVKNVDSDGNLIPVSSLNNCGKLNPLSLVLKQSPFFWKTKYTPTKFTLDDVL
TKNPPLNPAVKESDFVGYGGTFGDSQDASVDVETKLAAYAVDLNFNMGAKHASTLKSSLG
KLKKEEVDVKWLQNISKDKLLDMSLSLIQDARNNSSVFGVVMERIVTSEPCSIREKKHQA
GNVGAGGNVTGVPVSVKGKVEVHGVKDVFLEIPKNTVIAYSIEEIKVKRDGHFEVCSFGN
GGFEPAWQLFRSIRMSAVVSLQEESILHQELEKLSGHFQVLSSLPTAKRSSLLQLLKTTM
EDREAVSVLESVLDQMLVGETPDMDDLMEETEKQIVQAILELLHKSDGTNEGQTDDESPS
LLCSTNLIEGQTDDESPSLLCSTNLIEGQTDNESPSLLCSTNLIEGQTDNESPSLLCSTN
LIEGQTDDESPSLLCSTNLIEGQTDNESPSLLCSTNLIEGQTDDESPSLLCSTNLIEGQT
DDESPSLLCSTNLIEGQTDDESPSLLCSTNLIEGQTDDESPSLLCSTNLIEGQTDNKSPS
LLCSTNLIEGQTDDESPSLLCSINLIVSAMNEMTDEGLSVLGSCCSPPVLQALQILVHHV
AAGSGETLSLRDAGLAVLTEEEVFGRTESLFGHSEVTLKREEDTLRTEMKDQPGYLPLVM
SITVKGLASLV
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgtttgcctcagcaacagaaaactttgtgaagaacgtggattctgacggcaacctgata
cctgtgtcctccctgaacaactgtggcaagttgaaccctctctcactggttctcaaacaa
tccccgttcttctggaaaaccaaatacacgcctactaagttcaccctcgatgatgtgctt
accaaaaatccacccttaaacccagctgtcaaggagtctgactttgtgggctacggtggg
acatttggtgacagccaagatgccagcgtagatgtggagacaaaattggcagcatatgca
gtggatttaaactttaacatgggggcaaaacacgcctccacactcaagtcgtcccttggc
aaactgaagaaagaagaggttgacgttaagtggttacaaaacatctcaaaagacaagctt
ctggacatgtccctctctctgatccaggacgcccgtaataatagttctgtgtttggggtg
gtgatggaaaggattgtgacgagtgagccgtgctcgataagagaaaaaaagcatcaggct
ggaaacgttggtgctggagggaatgtcactggagtcccggtgtctgtaaaggggaaagta
gaagtacatggagtcaaagatgtgttcctggagattcctaaaaacactgtcattgcctac
agcattgaggagatcaaggtcaaacgcgatggacactttgaggtgtgctcctttggaaac
ggtgggtttgaacctgcctggcaactttttagatcaatcagaatgtccgcggtcgtgtcg
ctccaagaggaaagcattcttcatcaagaactggagaaactgagtggtcatttccaggtg
ctgtcatccctgccaacagccaaacgctcctctctgctccagctcctcaagacaaccatg
gaggacagagaggcagtcagtgtgctggagagtgtgctggatcagatgttggttggtgag
acaccggacatggatgatcttatggaggagactgagaagcagatagtccaggccatactg
gaacttttacacaagtctgatggaacaaatgagggccagacagacgacgagtcaccctca
ctgctctgttccaccaacctcattgagggccagacagacgacgagtcaccctcactgctc
tgttccaccaacctcattgagggccagacagacaacgagtcaccctcactgctctgttcc
accaacctcattgagggccagacagacaacgagtcaccctcactgctctgttccaccaac
ctcattgagggccagacagacgacgagtcaccctcactgctctgttccaccaacctcatt
gagggccagacagacaacgagtcaccctcactgctctgttccaccaacctcattgagggc
cagacagacgacgagtcaccctcactgctctgttccaccaacctcattgagggccagaca
gacgacgagtcaccctcactgctctgttccaccaacctcattgagggccagacagacgac
gagtcaccctcactgctctgttccaccaacctcattgagggccagacagacgacgagtca
ccctcactgctctgttccaccaacctcattgagggccagacggacaacaagtcaccctca
ctgctctgttccaccaacctcattgagggccagacggacgacgagtcaccctcactgctc
tgttccatcaacctcattgtcagtgccatgaatgaaatgacagatgagggtctgtctgtg
ttgggatcctgttgcagtcctccagtcttacaggccctgcagatcctggtgcatcacgtg
gcagcagggagtggagagaccctctctctgagagatgcaggtctggctgttctgactgag
gaggaggtgtttgggaggacagagagtctctttggtcactctgaagttacactgaagaga
gaggaggacacactgaggacagagatgaaggaccagcctggataccttcctctagtcatg
agtatcactgtgaaaggcctggcctcattagtgtaa
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